ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf74p10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK102622:Os04g0347900 58 3e-08
2AK103735:Os04g0348000 47 5e-05

>AK102622:Os04g0347900 |
          Length = 633
 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +2

Query: 758 LTRSRVRALSISTPESLKMRRTRSGRVIVPQLDSTRSWVVYDR 886
           LTR + ++ S+STPESLK+RRTRSGRV+VP LD     +VYDR
Sbjct: 559 LTRGKAKSSSVSTPESLKLRRTRSGRVVVPTLDPGCQRIVYDR 601



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>AK103735:Os04g0348000 |
          Length = 365

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 23/41 (56%), Positives = 33/41 (80%)
 Frame = +2

Query: 761 TRSRVRALSISTPESLKMRRTRSGRVIVPQLDSTRSWVVYD 883
           T+++ +ALS++TPESLK R TRSGR+IVP+LD     ++YD
Sbjct: 282 TKAKGKALSLATPESLK-RSTRSGRLIVPRLDPGSQKIIYD 321


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 53,779,280
Number of extensions: 1228727
Number of successful extensions: 2625
Number of sequences better than 10.0: 2
Number of HSP's gapped: 2624
Number of HSP's successfully gapped: 2
Length of query: 616
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 509
Effective length of database: 11,115,468
Effective search space: 5657773212
Effective search space used: 5657773212
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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