ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf71h16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 103 bits (52), Expect = 4e-18 Identities = 55/56 (98%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcaccgggct 2018 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188538 aagtggtcggacccttccccggaccctgcgcaagcgggagctacatgcaccgggct 188593
>emb|CT009587.1| Triticum turgidum Length = 229209 Score = 87.7 bits (44), Expect = 3e-13 Identities = 54/56 (96%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcaccgggct 2018 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 210697 aagtggtcggacccttccccg-accctgcgcaagcgggagctacatgcaccgggct 210751 Score = 85.7 bits (43), Expect = 1e-12 Identities = 49/51 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcacc 2013 |||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 220003 aagtggtcggacccttccctggaccctgcgcaagcgggagctacatgcacc 220053
>gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 87.7 bits (44), Expect = 3e-13 Identities = 54/56 (96%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcaccgggct 2018 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 8454 aagtggtcggacccttccccg-accctgcgcaagcgggagctacatgcaccgggct 8508 Score = 81.8 bits (41), Expect = 2e-11 Identities = 50/53 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcaccgg 2015 |||||||| ||| ||||||||||||||||||||||||||| |||||||||||| Sbjct: 8113 aagtggtcagacccttccccggaccctgcgcaagcgggagttacatgcaccgg 8165
>gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN-B1 (VRN-B1) gene, complete cds Length = 6297 Score = 87.7 bits (44), Expect = 3e-13 Identities = 54/56 (96%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcaccgggct 2018 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1611 aagtggtcggacccttccccg-accctgcgcaagcgggagctacatgcaccgggct 1665
>gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225D16 VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 87.7 bits (44), Expect = 3e-13 Identities = 54/56 (96%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcaccgggct 2018 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 8455 aagtggtcggacccttccccg-accctgcgcaagcgggagctacatgcaccgggct 8509 Score = 83.8 bits (42), Expect = 4e-12 Identities = 51/54 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcaccggg 2016 |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 8114 aagtggtcagacccttccccggaccctgcgcaagcgggagttacatgcaccggg 8167
>gb|AY675071.1| Aegilops vavilovii clone 9 retroposon Au element sequence Length = 168 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 109 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 158
>gb|AY675058.1| Aegilops juvenalis clone 7 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675055.1| Aegilops juvenalis clone 4 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675054.1| Aegilops juvenalis clone 3 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675053.1| Aegilops juvenalis clone 2 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675040.1| Aegilops columnaris clone 15 retroposon Au element sequence Length = 171 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 112 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 161
>gb|AY675030.1| Aegilops columnaris clone 5 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675025.1| Aegilops crassa clone 9 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675021.1| Aegilops crassa clone 5 retroposon Au element sequence Length = 171 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675019.1| Aegilops crassa clone 3 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675009.1| Aegilops comosa clone 3 retroposon Au element sequence Length = 173 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 61 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 12
>gb|AY675006.1| Aegilops uniaristata clone 12 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675005.1| Aegilops uniaristata clone 11 retroposon Au element sequence Length = 173 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 114 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 163
>gb|AY675004.1| Aegilops uniaristata clone 10 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675001.1| Aegilops uniaristata clone 7 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY674992.1| Aegilops umbellulata clone 8 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY674979.1| Aegilops tauschii clone 5 retroposon Au element sequence Length = 173 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 61 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 12
>gb|AY674969.1| Aegilops speltoides clone 5 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY674967.1| Aegilops speltoides clone 3 retroposon Au element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597500.1| Brassica napus clone Bna20 retroposon Au-like element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597499.1| Brassica napus clone Bna19 retroposon Au-like element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597495.1| Brassica napus clone Bna15 retroposon Au-like element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597459.1| Brassica nigra clone Bn05 retroposon Au-like element sequence Length = 172 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>dbj|AB046134.1| Aegilops umbellulata DNA, retrotransposon Au element Length = 216 Score = 83.8 bits (42), Expect = 4e-12 Identities = 48/50 (96%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 135 aagtggtcggacccttccccagaccctgcgcaagcgggagctacatgcac 184
>gb|AY674978.1| Aegilops tauschii clone 4 retroposon Au element sequence Length = 172 Score = 81.8 bits (41), Expect = 2e-11 Identities = 47/49 (95%) Strand = Plus / Minus Query: 1964 agtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 59 agtggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675017.1| Aegilops crassa clone 1 retroposon Au element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Minus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 57 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY674990.1| Aegilops umbellulata clone 6 retroposon Au element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Minus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 57 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY597508.1| Brassica carinata clone Bc14 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597507.1| Brassica carinata clone Bc12 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597505.1| Brassica carinata clone Bc07 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597503.1| Brassica carinata clone Bc03 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597502.1| Brassica napus clone Bna22 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597498.1| Brassica napus clone Bna18 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597496.1| Brassica napus clone Bna16 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597494.1| Brassica napus clone Bna14 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597493.1| Brassica napus clone Bna12 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597492.1| Brassica napus clone Bna11 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597490.1| Brassica napus clone Bna05 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597488.1| Brassica juncea clone Bj29 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597487.1| Brassica juncea clone Bj28 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597484.1| Brassica juncea clone Bj24 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597482.1| Brassica juncea clone Bj21 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597480.1| Brassica juncea clone Bj11 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597479.1| Brassica juncea clone Bj06 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597477.1| Brassica juncea clone Bj03 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597475.1| Brassica oleracea clone Bo12 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597474.1| Brassica oleracea clone Bo11 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597472.1| Brassica oleracea clone Bo08 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597471.1| Brassica oleracea clone Bo07 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597470.1| Brassica oleracea clone Bo06 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597467.1| Brassica nigra clone Bn29 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597465.1| Brassica nigra clone Bn27 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597464.1| Brassica nigra clone Bn25 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597461.1| Brassica nigra clone Bn10 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597460.1| Brassica nigra clone Bn07 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597456.1| Brassica rapa clone Br23 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597455.1| Brassica rapa clone Br22 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597453.1| Brassica rapa clone Br15 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597450.1| Brassica rapa clone Br12 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597449.1| Brassica rapa clone Br11 retroposon Au-like element sequence Length = 172 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597447.1| Brassica rapa clone Br06 retroposon Au-like element sequence Length = 171 Score = 77.8 bits (39), Expect = 2e-10 Identities = 45/47 (95%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 115 tggtcggacccttccccggaccctgcgcaagcgggagctaaatgcac 161
>gb|AY675068.1| Aegilops vavilovii clone 6 retroposon Au element sequence Length = 151 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||| ||||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccctggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675066.1| Aegilops vavilovii clone 4 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| || |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcgaacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675065.1| Aegilops vavilovii clone 3 retroposon Au element sequence Length = 173 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675063.1| Aegilops vavilovii clone 1 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgtgcaagcgggagctaaatgcac 162
>gb|AY675057.1| Aegilops juvenalis clone 6 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675051.1| Aegilops neglecta clone 11 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675050.1| Aegilops neglecta clone 10 retroposon Au element sequence Length = 173 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675049.1| Aegilops neglecta clone 9 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675048.1| Aegilops neglecta clone 8 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675047.1| Aegilops neglecta clone 7 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675046.1| Aegilops neglecta clone 6 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675045.1| Aegilops neglecta clone 5 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675044.1| Aegilops neglecta clone 4 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675042.1| Aegilops neglecta clone 2 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675037.1| Aegilops columnaris clone 12 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttcctcggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675036.1| Aegilops columnaris clone 11 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675035.1| Aegilops columnaris clone 10 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675034.1| Aegilops columnaris clone 9 retroposon Au element sequence Length = 173 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675027.1| Aegilops columnaris clone 2 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675026.1| Aegilops columnaris clone 1 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675020.1| Aegilops crassa clone 4 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675016.1| Aegilops comosa clone 10 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgtgcaagcgggagctaaatgcac 162
>gb|AY675015.1| Aegilops comosa clone 9 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgtgcaagcgggagctaaatgcac 162
>gb|AY675011.1| Aegilops comosa clone 5 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgtgcaagcgggagctaaatgcac 162
>gb|AY675008.1| Aegilops comosa clone 2 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675003.1| Aegilops uniaristata clone 9 retroposon Au element sequence Length = 171 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||| ||| |||||||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcagacccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675002.1| Aegilops uniaristata clone 8 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccggaccctgtgcaagcgggagctaaatgcac 11
>gb|AY674999.1| Aegilops uniaristata clone 5 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||| ||||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttcgccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY674997.1| Aegilops uniaristata clone 3 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY674994.1| Aegilops umbellulata clone 10 retroposon Au element sequence Length = 174 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 115 aagtggtcggacacttcccccgaccctgcgcaagcgggagctaaatgcac 164
>gb|AY674993.1| Aegilops umbellulata clone 9 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY674989.1| Aegilops umbellulata clone 5 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY674988.1| Aegilops umbellulata clone 4 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY674987.1| Aegilops umbellulata clone 3 retroposon Au element sequence Length = 180 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY674984.1| Aegilops tauschii clone 10 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgcggaagcgggagctaaatgcac 162
>gb|AY674968.1| Aegilops speltoides clone 4 retroposon Au element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597497.1| Brassica napus clone Bna17 retroposon Au-like element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597491.1| Brassica napus clone Bna09 retroposon Au-like element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttcctcggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597481.1| Brassica juncea clone Bj12 retroposon Au-like element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597473.1| Brassica oleracea clone Bo10 retroposon Au-like element sequence Length = 172 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597463.1| Brassica nigra clone Bn23 retroposon Au-like element sequence Length = 180 Score = 75.8 bits (38), Expect = 1e-09 Identities = 47/50 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 121 aagtggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 170
>gb|AY675023.1| Aegilops crassa clone 7 retroposon Au element sequence Length = 171 Score = 73.8 bits (37), Expect = 4e-09 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1964 agtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 59 agtggtcggacccttccccggaccctgtgcaagcgggagctaaatgcac 11
>gb|AY674975.1| Aegilops tauschii clone 1 retroposon Au element sequence Length = 171 Score = 71.9 bits (36), Expect = 1e-08 Identities = 51/56 (91%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcaccgggct 2018 ||||||| |||| |||||||||||||| ||||||||||||||| |||||| ||||| Sbjct: 113 aagtggttggacccttccccggaccctacgcaagcgggagctaaatgcactgggct 168
>gb|AY674974.1| Aegilops speltoides clone 10 retroposon Au element sequence Length = 161 Score = 71.9 bits (36), Expect = 1e-08 Identities = 45/48 (93%) Strand = Plus / Minus Query: 1965 gtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||| ||| |||||||||||||||||||||||||||||| |||||| Sbjct: 58 gtggtcagacccttccccggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY674973.1| Aegilops speltoides clone 9 retroposon Au element sequence Length = 161 Score = 71.9 bits (36), Expect = 1e-08 Identities = 45/48 (93%) Strand = Plus / Minus Query: 1965 gtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||| ||| |||||||||||||||||||||||||||||| |||||| Sbjct: 58 gtggtcagacccttccccggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY589260.1| Poa secunda clone 3 thioredoxin-like protein (Trx) gene, partial sequence Length = 643 Score = 71.9 bits (36), Expect = 1e-08 Identities = 46/48 (95%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 1969 tcggactcttccccggaccctgcgcaagcgggagctacatgcaccggg 2016 |||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 210 tcggacccttccccggaccctgcgcaagcgggagctac-tgcaccggg 256
>gb|AY589259.1| Poa arida voucher PI 578806 clone 3 thioredoxin-like protein (Trx) gene, partial sequence Length = 634 Score = 71.9 bits (36), Expect = 1e-08 Identities = 46/48 (95%), Gaps = 1/48 (2%) Strand = Plus / Plus Query: 1969 tcggactcttccccggaccctgcgcaagcgggagctacatgcaccggg 2016 |||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 209 tcggacccttccccggaccctgcgcaagcgggagctac-tgcaccggg 255
>gb|AY675029.1| Aegilops columnaris clone 4 retroposon Au element sequence Length = 172 Score = 69.9 bits (35), Expect = 6e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY674966.1| Aegilops speltoides clone 2 retroposon Au element sequence Length = 172 Score = 69.9 bits (35), Expect = 6e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 57 tggtcggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY597506.1| Brassica carinata clone Bc11 retroposon Au-like element sequence Length = 172 Score = 69.9 bits (35), Expect = 6e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 116 tggtcgggcccttccccggaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597483.1| Brassica juncea clone Bj22 retroposon Au-like element sequence Length = 172 Score = 69.9 bits (35), Expect = 6e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgtaagcgggagctaaatgcac 162
>gb|AY597462.1| Brassica nigra clone Bn11 retroposon Au-like element sequence Length = 172 Score = 69.9 bits (35), Expect = 6e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||||| ||||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcgcgagcgggagctaaatgcac 162
>gb|AY675070.1| Aegilops vavilovii clone 8 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||| ||| ||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccgaaccgtgcgcaagcgggagctaaatgcac 11
>gb|AY675069.1| Aegilops vavilovii clone 7 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||| |||||||| |||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccctggaccctgtgcaagcgggagctaaatgcac 11
>gb|AY675064.1| Aegilops vavilovii clone 2 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| ||||||||||||||||| |||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcgcaagcgggcgctaaatgcac 11
>gb|AY675062.1| Aegilops juvenalis clone 11 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||| ||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttcctcggagcctgcgcaagcgggagctaaatgcac 11
>gb|AY675061.1| Aegilops juvenalis clone 10 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||| |||||||||||| ||||||||||||| |||||| Sbjct: 113 aagtggtcggaccctttcccggaccctgctcaagcgggagctaaatgcac 162
>gb|AY675060.1| Aegilops juvenalis clone 9 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||| ||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttcctcggagcctgcgcaagcgggagctaaatgcac 11
>gb|AY675059.1| Aegilops juvenalis clone 8 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||| |||||||||||| ||||||||||||| |||||| Sbjct: 113 aagtggtcggaccctttcccggaccctgctcaagcgggagctaaatgcac 162
>gb|AY675056.1| Aegilops juvenalis clone 5 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||| |||||||||||| ||||||||||||| |||||| Sbjct: 113 aagtggtcggaccctttcccggaccctgctcaagcgggagctaaatgcac 162
>gb|AY675052.1| Aegilops juvenalis clone 1 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||| ||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcagacccttccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675043.1| Aegilops neglecta clone 3 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||| ||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagaccctgcacaagcgggagctaaatgcac 11
>gb|AY675033.1| Aegilops columnaris clone 8 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||| |||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggttggacccttccccagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675031.1| Aegilops columnaris clone 6 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| ||||||| |||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgtgcaagcgggagctaaatgcac 162
>gb|AY675024.1| Aegilops crassa clone 8 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| ||||||| |||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgtgcaagcgggagctaaatgcac 162
>gb|AY675010.1| Aegilops comosa clone 4 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||||||| |||| ||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggactctgcacaagcgggagctaaatgcac 162
>gb|AY674991.1| Aegilops umbellulata clone 7 retroposon Au element sequence Length = 171 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||| ||||| ||||||| |||||||||||||||||||||| |||||| Sbjct: 112 aagtggccggacccttccccagaccctgcgcaagcgggagctaaatgcac 161
>gb|AY674981.1| Aegilops tauschii clone 7 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||| |||||||||||| ||||||||||||| |||||| Sbjct: 60 aagtggtcggaccctttcccggaccctgctcaagcgggagctaaatgcac 11
>gb|AY674980.1| Aegilops tauschii clone 6 retroposon Au element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||| |||||||||||| ||||||||||||| |||||| Sbjct: 60 aagtggtcggaccctttcccggaccctgctcaagcgggagctaaatgcac 11
>gb|AY674972.1| Aegilops speltoides clone 8 retroposon Au element sequence Length = 171 Score = 67.9 bits (34), Expect = 2e-07 Identities = 47/50 (94%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||||| ||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccg-accctgcgcaagcgggagctaaatgcac 161
>gb|AY597510.1| Brassica carinata clone Bc16 retroposon Au-like element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||||||||||| ||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccggaccctgtacaagcgggagctaaatgcac 162
>gb|AY597504.1| Brassica carinata clone Bc05 retroposon Au-like element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||| ||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttcctcggagcctgcgcaagcgggagctaaatgcac 162
>gb|AY597486.1| Brassica juncea clone Bj27 retroposon Au-like element sequence Length = 172 Score = 67.9 bits (34), Expect = 2e-07 Identities = 46/50 (92%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| | ||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccctccccagaccctgcgcaagcgggagctaaatgcac 162
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 65.9 bits (33), Expect = 9e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 1982 cggaccctgcgcaagcgggagctacatgcaccgggct 2018 |||| |||||||||||||||||||||||||||||||| Sbjct: 6590 cggaacctgcgcaagcgggagctacatgcaccgggct 6554
>dbj|AK242590.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090011I23, full insert sequence Length = 3588 Score = 63.9 bits (32), Expect = 4e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 445 aggcagaaatttatggatgcaaaacgcctttctactgatgaatc 488 ||||| ||| ||||||||||||| |||||||||||||||||||| Sbjct: 782 aggcaaaaacttatggatgcaaagcgcctttctactgatgaatc 825 Score = 60.0 bits (30), Expect = 6e-05 Identities = 117/146 (80%) Strand = Plus / Plus Query: 2460 gtgagctccaacgaagacgaacaaccaagtccggtgtctgtcctcggatcttcggtggac 2519 ||||||||| || |||| || |||| |||||| || ||||| || | |||||| ||||| Sbjct: 2552 gtgagctccgacaaagatgatcaacaaagtccagtttctgttcttgaatcttccttggac 2611 Query: 2520 gcagaagactgttgctcaggaggttttgagaaaataagtgcagaccttcaagggctcagg 2579 || |||||| || || || | |||||||||||| ||||| || |||||||| || || Sbjct: 2612 gctgaagacatttattctggtgattttgagaaaattagtgctgatcttcaaggactgaga 2671 Query: 2580 atgcaactccgcctgctcaagatgga 2605 |||||||| || || ||||||||||| Sbjct: 2672 atgcaactgcgacttctcaagatgga 2697 Score = 54.0 bits (27), Expect = 0.004 Identities = 54/63 (85%) Strand = Plus / Plus Query: 318 aagcactgatgagattccggaattcaaagatgttttcgaagtaatggagaccaccagaat 377 |||||| |||||||| || ||| ||||||||||||| ||||| |||||| | || ||||| Sbjct: 637 aagcacagatgagatgccagaagtcaaagatgtttttgaagttatggaggcaacaagaat 696 Query: 378 gaa 380 ||| Sbjct: 697 gaa 699
>ref|NM_001056273.1| Oryza sativa (japonica cultivar-group) Os03g0280700 (Os03g0280700) mRNA, complete cds Length = 3714 Score = 63.9 bits (32), Expect = 4e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 445 aggcagaaatttatggatgcaaaacgcctttctactgatgaatc 488 ||||| ||| ||||||||||||| |||||||||||||||||||| Sbjct: 661 aggcaaaaacttatggatgcaaagcgcctttctactgatgaatc 704 Score = 54.0 bits (27), Expect = 0.004 Identities = 54/63 (85%) Strand = Plus / Plus Query: 318 aagcactgatgagattccggaattcaaagatgttttcgaagtaatggagaccaccagaat 377 |||||| |||||||| || ||| ||||||||||||| ||||| |||||| | || ||||| Sbjct: 516 aagcacagatgagatgccagaagtcaaagatgtttttgaagttatggaggcaacaagaat 575 Query: 378 gaa 380 ||| Sbjct: 576 gaa 578
>gb|AY597451.1| Brassica rapa clone Br13 retroposon Au-like element sequence Length = 172 Score = 63.9 bits (32), Expect = 4e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 1977 ttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||||||||||||||||||||||| |||||| Sbjct: 127 ttccccggaccctgcgcaagcgggagctaaatgcac 162
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 63.9 bits (32), Expect = 4e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 445 aggcagaaatttatggatgcaaaacgcctttctactgatgaatc 488 ||||| ||| ||||||||||||| |||||||||||||||||||| Sbjct: 9565382 aggcaaaaacttatggatgcaaagcgcctttctactgatgaatc 9565425 Score = 54.0 bits (27), Expect = 0.004 Identities = 54/63 (85%) Strand = Plus / Plus Query: 318 aagcactgatgagattccggaattcaaagatgttttcgaagtaatggagaccaccagaat 377 |||||| |||||||| || ||| ||||||||||||| ||||| |||||| | || ||||| Sbjct: 9565237 aagcacagatgagatgccagaagtcaaagatgtttttgaagttatggaggcaacaagaat 9565296 Query: 378 gaa 380 ||| Sbjct: 9565297 gaa 9565299
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009C19, from chromosome 3, complete sequence Length = 131709 Score = 63.9 bits (32), Expect = 4e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 445 aggcagaaatttatggatgcaaaacgcctttctactgatgaatc 488 ||||| ||| ||||||||||||| |||||||||||||||||||| Sbjct: 45425 aggcaaaaacttatggatgcaaagcgcctttctactgatgaatc 45382 Score = 54.0 bits (27), Expect = 0.004 Identities = 54/63 (85%) Strand = Plus / Minus Query: 318 aagcactgatgagattccggaattcaaagatgttttcgaagtaatggagaccaccagaat 377 |||||| |||||||| || ||| ||||||||||||| ||||| |||||| | || ||||| Sbjct: 45570 aagcacagatgagatgccagaagtcaaagatgtttttgaagttatggaggcaacaagaat 45511 Query: 378 gaa 380 ||| Sbjct: 45510 gaa 45508
>gb|AY597469.1| Brassica oleracea clone Bo05 retroposon Au-like element sequence Length = 172 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| |||||||||||||||| || |||||||||| |||||| Sbjct: 116 tggtcggacccttccccggaccctgcacaggcgggagctaaatgcac 162
>gb|AY597468.1| Brassica oleracea clone Bo02 retroposon Au-like element sequence Length = 172 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||| || |||||||||||||||||| ||||||||||| |||||| Sbjct: 116 tggtcgaacccttccccggaccctgcgccagcgggagctaaatgcac 162
>gb|AY597446.1| Brassica rapa clone Br04 retroposon Au-like element sequence Length = 173 Score = 61.9 bits (31), Expect = 1e-05 Identities = 47/51 (92%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaa-gcgggagctacatgcac 2012 |||||||||||| ||||||| |||||||||||| |||||||||| |||||| Sbjct: 113 aagtggtcggacccttccccagaccctgcgcaaggcgggagctaaatgcac 163
>dbj|AB046151.1| Hordeum vulgare DNA, retrotransposon Au element, clone:bl11 Length = 130 Score = 61.9 bits (31), Expect = 1e-05 Identities = 34/35 (97%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| |||||||||||||||||||||| Sbjct: 96 aagtggtcggacccttccccggaccctgcgcaagc 130
>dbj|AB046148.1| Secale cereale DNA, retrotransposon Au element, clone:ry05 Length = 130 Score = 61.9 bits (31), Expect = 1e-05 Identities = 34/35 (97%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| |||||||||||||||||||||| Sbjct: 96 aagtggtcggacccttccccggaccctgcgcaagc 130
>dbj|AB046144.1| Secale cereale DNA, retrotransposon Au element, clone:ry11 Length = 131 Score = 61.9 bits (31), Expect = 1e-05 Identities = 34/35 (97%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| |||||||||||||||||||||| Sbjct: 97 aagtggtcggacccttccccggaccctgcgcaagc 131
>gb|AY675067.1| Aegilops vavilovii clone 5 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||| ||| |||||||||||||| |||||||||||||| |||||| Sbjct: 113 aagtggtcagacccttccccggaccctttgcaagcgggagctaaatgcac 162
>gb|AY675041.1| Aegilops neglecta clone 1 retroposon Au element sequence Length = 171 Score = 60.0 bits (30), Expect = 6e-05 Identities = 46/50 (92%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| |||||| | ||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttcccag-accctgcgcaagcgggagctaaatgcac 161
>gb|AY675039.1| Aegilops columnaris clone 14 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| | |||| ||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagcccctacgcaagcgggagctaaatgcac 11
>gb|AY675032.1| Aegilops columnaris clone 7 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| | |||| ||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagcccctacgcaagcgggagctaaatgcac 11
>gb|AY675028.1| Aegilops columnaris clone 3 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||||| | |||| ||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccccagcccctacgcaagcgggagctaaatgcac 11
>gb|AY675022.1| Aegilops crassa clone 6 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccatagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675013.1| Aegilops comosa clone 7 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccatagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY675012.1| Aegilops comosa clone 6 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccatagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY674998.1| Aegilops uniaristata clone 4 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||| ||| ||| |||||||||||| ||||||||||||| |||||| Sbjct: 113 aagtggtctgaccctttcccggaccctgctcaagcgggagctaaatgcac 162
>gb|AY674985.1| Aegilops umbellulata clone 1 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||||||||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttccatagaccctgcgcaagcgggagctaaatgcac 11
>gb|AY674983.1| Aegilops tauschii clone 9 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||| |||| ||||| ||||||||| |||||||||||||| |||||| Sbjct: 60 aagtggttggacccttcctcggaccctgtgcaagcgggagctaaatgcac 11
>gb|AY674982.1| Aegilops tauschii clone 8 retroposon Au element sequence Length = 171 Score = 60.0 bits (30), Expect = 6e-05 Identities = 46/50 (92%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||| |||| |||||||||||| ||||||||||||||||| |||||| Sbjct: 113 aagtggttggacccttccccggacc-tgcgcaagcgggagctaaatgcac 161
>gb|AY674971.1| Aegilops speltoides clone 7 retroposon Au element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| | |||||||| || |||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccctccccggatccagcgcaagcgggagctaaatgcac 11
>gb|AY597501.1| Brassica napus clone Bna21 retroposon Au-like element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| || |||| |||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttcctcgaaccccgcgcaagcgggagctaaatgcac 162
>gb|AY597466.1| Brassica nigra clone Bn28 retroposon Au-like element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccatagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597457.1| Brassica rapa clone Br24 retroposon Au-like element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccatagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY597452.1| Brassica rapa clone Br14 retroposon Au-like element sequence Length = 172 Score = 60.0 bits (30), Expect = 6e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||||||||||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccatagaccctgcgcaagcgggagctaaatgcac 162
>gb|AY675000.1| Aegilops uniaristata clone 6 retroposon Au element sequence Length = 160 Score = 54.0 bits (27), Expect = 0.004 Identities = 30/31 (96%) Strand = Plus / Minus Query: 1982 cggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||||||||||||||| |||||| Sbjct: 41 cggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY674996.1| Aegilops uniaristata clone 2 retroposon Au element sequence Length = 160 Score = 54.0 bits (27), Expect = 0.004 Identities = 30/31 (96%) Strand = Plus / Minus Query: 1982 cggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||||||||||||||| |||||| Sbjct: 41 cggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY674995.1| Aegilops uniaristata clone 1 retroposon Au element sequence Length = 160 Score = 54.0 bits (27), Expect = 0.004 Identities = 30/31 (96%) Strand = Plus / Minus Query: 1982 cggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||||||||||||||| |||||| Sbjct: 41 cggaccctgcgcaagcgggagctaaatgcac 11
>gb|AY597454.1| Brassica rapa clone Br17 retroposon Au-like element sequence Length = 172 Score = 54.0 bits (27), Expect = 0.004 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1966 tggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 ||||||||| ||||| |||||||||||||||||||||| |||||| Sbjct: 116 tggtcggacccttccatagaccctgcgcaagcgggagctaaatgcac 162
>dbj|AB046152.1| Hordeum vulgare DNA, retrotransposon Au element, clone:bl05 Length = 130 Score = 54.0 bits (27), Expect = 0.004 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| ||||||||||||||||||||| Sbjct: 96 aagtggtcggacctttccccggaccctgcgcaagc 130
>dbj|AB046146.1| Secale cereale DNA, retrotransposon Au element, clone:ry08 Length = 130 Score = 54.0 bits (27), Expect = 0.004 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| |||||| ||||||||||||||| Sbjct: 96 aagtggtcggacccttccctggaccctgcgcaagc 130
>dbj|AB046140.1| Triticum aestivum DNA, retrotransposon Au element, clone:wh06 Length = 130 Score = 54.0 bits (27), Expect = 0.004 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| ||| |||||||||||||||||| Sbjct: 96 aagtggtcggaccctttcccggaccctgcgcaagc 130
>dbj|AB046138.1| Triticum aestivum DNA, retrotransposon Au element, clone:wh09 Length = 130 Score = 54.0 bits (27), Expect = 0.004 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| |||||| ||||||||||||||| Sbjct: 96 aagtggtcggacccttccctggaccctgcgcaagc 130
>dbj|AB046137.1| Triticum aestivum DNA, retrotransposon Au element, clone:wh07 Length = 130 Score = 54.0 bits (27), Expect = 0.004 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| |||||| ||||||||||||||| Sbjct: 96 aagtggtcggacccttccctggaccctgcgcaagc 130
>dbj|AB046136.1| Triticum aestivum DNA, retrotransposon Au element, clone:wh03 Length = 130 Score = 54.0 bits (27), Expect = 0.004 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| |||||| ||||||||||||||| Sbjct: 96 aagtggtcggacccttccctggaccctgcgcaagc 130
>dbj|AB046135.1| Triticum aestivum DNA, retrotransposon Au element, clone:wh01 Length = 130 Score = 54.0 bits (27), Expect = 0.004 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| |||||| ||||||||||||||| Sbjct: 96 aagtggtcggacccttccctggaccctgcgcaagc 130
>gb|AY675072.1| Aegilops vavilovii clone 10 retroposon Au element sequence Length = 172 Score = 52.0 bits (26), Expect = 0.014 Identities = 38/42 (90%) Strand = Plus / Plus Query: 1971 ggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||| ||||||| |||||||| ||||||||||||| |||||| Sbjct: 121 ggacccttccccagaccctgcacaagcgggagctaaatgcac 162
>gb|AY675038.1| Aegilops columnaris clone 13 retroposon Au element sequence Length = 172 Score = 52.0 bits (26), Expect = 0.014 Identities = 44/50 (88%) Strand = Plus / Minus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||||| ||||||||||||||| |||||| Sbjct: 60 aagtggtcggacccttcctaggaccccacgcaagcgggagctaaatgcac 11
>gb|AY597478.1| Brassica juncea clone Bj05 retroposon Au-like element sequence Length = 172 Score = 52.0 bits (26), Expect = 0.014 Identities = 44/50 (88%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccatagaccctgtgcaagcgggagctaaatgcac 162
>gb|AY597458.1| Brassica nigra clone Bn04 retroposon Au-like element sequence Length = 168 Score = 52.0 bits (26), Expect = 0.014 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1983 ggaccctgcgcaagcgggagctacatgcac 2012 ||||||||||||||||||||||| |||||| Sbjct: 129 ggaccctgcgcaagcgggagctaaatgcac 158
>dbj|AB046154.1| Hordeum vulgare DNA, retrotransposon Au element, clone:bl01 Length = 129 Score = 52.0 bits (26), Expect = 0.014 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1968 gtcggactcttccccggaccctgcgcaagc 1997 ||||||| |||||||||||||||||||||| Sbjct: 100 gtcggacccttccccggaccctgcgcaagc 129
>dbj|AB046153.1| Hordeum vulgare DNA, retrotransposon Au element, clone:bl14 Length = 129 Score = 52.0 bits (26), Expect = 0.014 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1968 gtcggactcttccccggaccctgcgcaagc 1997 ||||||| |||||||||||||||||||||| Sbjct: 100 gtcggacccttccccggaccctgcgcaagc 129
>gb|AY465427.2| Triticum turgidum subsp. durum putative C3H2C3 RING-finger protein (6G2) gene, complete cds Length = 3646 Score = 50.1 bits (25), Expect = 0.055 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1982 cggaccctgcgcaagcgggagctacatgcaccgggct 2018 |||||||| |||||| |||||||||||||||||||| Sbjct: 2151 cggaccctatgcaagctggagctacatgcaccgggct 2115
>gb|AC192002.2| Pan troglodytes BAC clone CH251-736L17 from chromosome 7, complete sequence Length = 193150 Score = 48.1 bits (24), Expect = 0.22 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2524 aagactgttgctcaggaggttttg 2547 |||||||||||||||||||||||| Sbjct: 75589 aagactgttgctcaggaggttttg 75566
>gb|AC187375.3| Pan troglodytes BAC clone CH251-399L3 from chromosome 7, complete sequence Length = 155081 Score = 48.1 bits (24), Expect = 0.22 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2524 aagactgttgctcaggaggttttg 2547 |||||||||||||||||||||||| Sbjct: 9593 aagactgttgctcaggaggttttg 9616
>ref|XM_534218.2| PREDICTED: Canis familiaris hypothetical LOC477018 (LOC477018), mRNA Length = 8928 Score = 48.1 bits (24), Expect = 0.22 Identities = 24/24 (100%) Strand = Plus / Plus Query: 3067 agacggagtgcttccaggaggaga 3090 |||||||||||||||||||||||| Sbjct: 8243 agacggagtgcttccaggaggaga 8266
>gb|AC006479.2| Homo sapiens PAC clone RP5-1051J4 from 7, complete sequence Length = 161837 Score = 48.1 bits (24), Expect = 0.22 Identities = 24/24 (100%) Strand = Plus / Plus Query: 2524 aagactgttgctcaggaggttttg 2547 |||||||||||||||||||||||| Sbjct: 27951 aagactgttgctcaggaggttttg 27974
>gb|AY675014.1| Aegilops comosa clone 8 retroposon Au element sequence Length = 160 Score = 46.1 bits (23), Expect = 0.86 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1982 cggaccctgcgcaagcgggagctacatgcac 2012 |||||||||| ||||||||||||| |||||| Sbjct: 120 cggaccctgcacaagcgggagctaaatgcac 150
>gb|AY674986.1| Aegilops umbellulata clone 2 retroposon Au element sequence Length = 160 Score = 46.1 bits (23), Expect = 0.86 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1982 cggaccctgcgcaagcgggagctacatgcac 2012 |||||||||| ||||||||||||| |||||| Sbjct: 120 cggaccctgcacaagcgggagctaaatgcac 150
>gb|AY674965.1| Aegilops speltoides clone 1 retroposon Au element sequence Length = 160 Score = 46.1 bits (23), Expect = 0.86 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1982 cggaccctgcgcaagcgggagctacatgcac 2012 |||||||||| ||||||||||||| |||||| Sbjct: 120 cggaccctgcacaagcgggagctaaatgcac 150
>gb|AY597489.1| Brassica napus clone Bna04 retroposon Au-like element sequence Length = 172 Score = 46.1 bits (23), Expect = 0.86 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| ||||||| |||||||| ||||| |||||| Sbjct: 113 aagtggtcggacccttccatagaccctgtgcaagcggnagctaaatgcac 162
>gb|AY597485.1| Brassica juncea clone Bj25 retroposon Au-like element sequence Length = 160 Score = 46.1 bits (23), Expect = 0.86 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1982 cggaccctgcgcaagcgggagctacatgcac 2012 |||||||||| ||||||||||||| |||||| Sbjct: 120 cggaccctgcacaagcgggagctaaatgcac 150
>gb|AY597448.1| Brassica rapa clone Br07 retroposon Au-like element sequence Length = 172 Score = 46.1 bits (23), Expect = 0.86 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1986 ccctgcgcaagcgggagctacatgcac 2012 |||||||||||||||||||| |||||| Sbjct: 136 ccctgcgcaagcgggagctaaatgcac 162
>dbj|AB046158.1| Avena sativa DNA, retrotransposon Au element, clone:ot02 Length = 130 Score = 46.1 bits (23), Expect = 0.86 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 ||||||||||| ||||||||||||||| |||||| Sbjct: 96 aagtggtcggatccttccccggaccctgtgcaagc 130
>dbj|AB046150.1| Secale cereale DNA, retrotransposon Au element, clone:ry02 Length = 129 Score = 46.1 bits (23), Expect = 0.86 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| |||||||||||| ||| ||||| Sbjct: 95 aagtggtcggacccttccccggaccttgcacaagc 129
>dbj|AB046145.1| Secale cereale DNA, retrotransposon Au element, clone:ry12 Length = 132 Score = 46.1 bits (23), Expect = 0.86 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| ||||||||||| ||| |||||| Sbjct: 98 aagtggtcggacccttccccggactctgtgcaagc 132
>dbj|AB046142.1| Secale cereale DNA, retrotransposon Au element, clone:ry07 Length = 130 Score = 46.1 bits (23), Expect = 0.86 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagc 1997 |||||||||||| ||||| ||||||||||||||| Sbjct: 96 aagtggtcggacccttccttggaccctgcgcaagc 130
>ref|NM_001061008.1| Oryza sativa (japonica cultivar-group) Os05g0116700 (Os05g0116700) mRNA, complete cds Length = 3226 Score = 44.1 bits (22), Expect = 3.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 145 cctggtattgtgggcaggctcatgggccttgaca 178 ||||||||||| | |||||||||||| ||||||| Sbjct: 438 cctggtattgttgccaggctcatgggacttgaca 471 Score = 44.1 bits (22), Expect = 3.4 Identities = 43/50 (86%) Strand = Plus / Plus Query: 439 tttgtaaggcagaaatttatggatgcaaaacgcctttctactgatgaatc 488 ||||| ||||||||||| ||||||| || |||||||| || |||||||| Sbjct: 726 tttgtgaggcagaaattcttggatgcgaagcgcctttccaccgatgaatc 775
>gb|AC151792.1| Ornithorhynchus anatinus chromosome UNK clone OABb-103A1, complete sequence Length = 107943 Score = 44.1 bits (22), Expect = 3.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 542 aagatgctctcatggaaattct 563 |||||||||||||||||||||| Sbjct: 74143 aagatgctctcatggaaattct 74164
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 44.1 bits (22), Expect = 3.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 145 cctggtattgtgggcaggctcatgggccttgaca 178 ||||||||||| | |||||||||||| ||||||| Sbjct: 72847 cctggtattgttgccaggctcatgggacttgaca 72880 Score = 44.1 bits (22), Expect = 3.4 Identities = 43/50 (86%) Strand = Plus / Plus Query: 439 tttgtaaggcagaaatttatggatgcaaaacgcctttctactgatgaatc 488 ||||| ||||||||||| ||||||| || |||||||| || |||||||| Sbjct: 73135 tttgtgaggcagaaattcttggatgcgaagcgcctttccaccgatgaatc 73184
>gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, complete sequence Length = 228889 Score = 44.1 bits (22), Expect = 3.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2182 caggtatgttcattttatgcta 2203 |||||||||||||||||||||| Sbjct: 112018 caggtatgttcattttatgcta 111997
>gb|AY597509.1| Brassica carinata clone Bc15 retroposon Au-like element sequence Length = 172 Score = 44.1 bits (22), Expect = 3.4 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1963 aagtggtcggactcttccccggaccctgcgcaagcgggagctacatgcac 2012 |||||||||||| ||||| |||| ||||| ||||||||||| |||||| Sbjct: 113 aagtggtcggacccttccatagaccatgcgcgagcgggagctaaatgcac 162
>gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, complete sequence Length = 229721 Score = 44.1 bits (22), Expect = 3.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2182 caggtatgttcattttatgcta 2203 |||||||||||||||||||||| Sbjct: 8366 caggtatgttcattttatgcta 8345
>gb|AC154548.3| Mus musculus BAC clone RP23-437N23 from chromosome 13, complete sequence Length = 173722 Score = 44.1 bits (22), Expect = 3.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2125 cagacatttgcaatagatgaccattt 2150 |||||||||||||||| ||||||||| Sbjct: 133752 cagacatttgcaataggtgaccattt 133777
>gb|AC093783.2| Homo sapiens BAC clone RP11-209D20 from 4, complete sequence Length = 121709 Score = 44.1 bits (22), Expect = 3.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3320 tgagaagcaaaactctgtagcttgtt 3345 ||||||||||||||||||| |||||| Sbjct: 97171 tgagaagcaaaactctgtaacttgtt 97196
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 3.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 145 cctggtattgtgggcaggctcatgggccttgaca 178 ||||||||||| | |||||||||||| ||||||| Sbjct: 868424 cctggtattgttgccaggctcatgggacttgaca 868457 Score = 44.1 bits (22), Expect = 3.4 Identities = 43/50 (86%) Strand = Plus / Plus Query: 439 tttgtaaggcagaaatttatggatgcaaaacgcctttctactgatgaatc 488 ||||| ||||||||||| ||||||| || |||||||| || |||||||| Sbjct: 868712 tttgtgaggcagaaattcttggatgcgaagcgcctttccaccgatgaatc 868761
>ref|XM_682604.1| PREDICTED: Danio rerio similar to AHNAK nucleoprotein isoform 1 (LOC559276), mRNA Length = 15280 Score = 44.1 bits (22), Expect = 3.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1360 cagaaacatcaacatcaacatc 1381 |||||||||||||||||||||| Sbjct: 2972 cagaaacatcaacatcaacatc 2951
>emb|BX571940.12| Zebrafish DNA sequence from clone DKEY-171N3 in linkage group 14, complete sequence Length = 179550 Score = 44.1 bits (22), Expect = 3.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1360 cagaaacatcaacatcaacatc 1381 |||||||||||||||||||||| Sbjct: 122987 cagaaacatcaacatcaacatc 122966
>dbj|AK121961.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107O09, full insert sequence Length = 3228 Score = 44.1 bits (22), Expect = 3.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 145 cctggtattgtgggcaggctcatgggccttgaca 178 ||||||||||| | |||||||||||| ||||||| Sbjct: 439 cctggtattgttgccaggctcatgggacttgaca 472 Score = 44.1 bits (22), Expect = 3.4 Identities = 43/50 (86%) Strand = Plus / Plus Query: 439 tttgtaaggcagaaatttatggatgcaaaacgcctttctactgatgaatc 488 ||||| ||||||||||| ||||||| || |||||||| || |||||||| Sbjct: 727 tttgtgaggcagaaattcttggatgcgaagcgcctttccaccgatgaatc 776
>gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, complete sequence Length = 213958 Score = 44.1 bits (22), Expect = 3.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2182 caggtatgttcattttatgcta 2203 |||||||||||||||||||||| Sbjct: 126775 caggtatgttcattttatgcta 126796
>dbj|AP002499.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-107P10, complete sequence Length = 176429 Score = 44.1 bits (22), Expect = 3.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3094 tgatgggtgtggggtggctgga 3115 |||||||||||||||||||||| Sbjct: 89868 tgatgggtgtggggtggctgga 89889
>dbj|AP003063.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-65M17, complete sequence Length = 181208 Score = 44.1 bits (22), Expect = 3.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3094 tgatgggtgtggggtggctgga 3115 |||||||||||||||||||||| Sbjct: 30758 tgatgggtgtggggtggctgga 30779
>emb|CT025642.13| Mouse DNA sequence from clone RP23-471B6 on chromosome 13, complete sequence Length = 175367 Score = 44.1 bits (22), Expect = 3.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2125 cagacatttgcaatagatgaccattt 2150 |||||||||||||||| ||||||||| Sbjct: 3219 cagacatttgcaataggtgaccattt 3244
>dbj|AB046149.1| Secale cereale DNA, retrotransposon Au element, clone:ry01 Length = 133 Score = 44.1 bits (22), Expect = 3.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1976 cttccccggaccctgcgcaagc 1997 |||||||||||||||||||||| Sbjct: 112 cttccccggaccctgcgcaagc 133 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 630,047,422 Number of extensions: 33265302 Number of successful extensions: 171060 Number of sequences better than 10.0: 217 Number of HSP's gapped: 171053 Number of HSP's successfully gapped: 229 Length of query: 3491 Length of database: 18,610,659,111 Length adjustment: 24 Effective length of query: 3467 Effective length of database: 18,499,340,271 Effective search space: 64137212719557 Effective search space used: 64137212719557 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
