ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf49g11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q28891:S5A1_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 1 - Maca... 40 0.030
2P18405:S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 - Homo... 40 0.030
3P24008:S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 - Rattus... 37 0.25
4P23913:LBR_CHICK Lamin-B receptor - Gallus gallus (Chicken) 36 0.43
5P04929:HRPX_PLALO Histidine-rich glycoprotein precursor - Plasmo... 36 0.43
6Q38944:DET2_ARATH Probable steroid reductase DET2 - Arabidopsis ... 35 0.74
7Q3V0B4:CC108_MOUSE Coiled-coil domain-containing protein 108 - M... 35 0.74
8P70545:S13A2_RAT Solute carrier family 13 member 2 - Rattus norv... 34 1.6
9Q9LDR4:ERG24_ARATH Delta(14)-sterol reductase - Arabidopsis thal... 33 2.2
10P06682:CO9_ONCMY Complement component C9 - Oncorhynchus mykiss (... 33 2.2
11A2IDD5:CCD78_HUMAN Coiled-coil domain-containing protein 78 - Ho... 33 2.2
12Q80VL3:LMO6_MOUSE LIM domain only protein 6 - Mus musculus (Mouse) 32 4.8
13Q09195:ERG24_SCHPO Delta(14)-sterol reductase - Schizosaccharomy... 32 4.8
14Q8WMV1:ERG24_BOVIN Delta(14)-sterol reductase - Bos taurus (Bovine) 32 4.8
15Q28983:ZAN_PIG Zonadhesin precursor - Sus scrofa (Pig) 26 6.0
16Q9FG77:WRKY2_ARATH Probable WRKY transcription factor 2 - Arabid... 32 8.2
17O52520:TREZ_BREHE Malto-oligosyltrehalose trehalohydrolase - Bre... 32 8.2
18Q9Y566:SHAN1_HUMAN SH3 and multiple ankyrin repeat domains prote... 32 8.2
19O43900:LMO6_HUMAN LIM domain only protein 6 - Homo sapiens (Human) 32 8.2

>Q28891:S5A1_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 1 - Macaca fascicularis (Crab|
           eating macaque) (Cynomolgus monkey)
          Length = 263
 Score = 39.7 bits (91), Expect = 0.030
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = +3

Query: 651 EARDIIGWIMWAIGLFVEAIADQQKLKFKNSPSNRGKWCNVGLWSYTRHPNYFGEILLWW 830
           + R +IG+ +W  G+ +   +D      +       K    GL+ Y    NYFGEI+ W 
Sbjct: 152 DPRFLIGFGLWLAGMLINIHSDHILRNLRKPGDTGYKIPRGGLFEYVTAANYFGEIMEWC 211

Query: 831 GVFVASTPVLSGA 869
           G  +AS  V   A
Sbjct: 212 GYALASWSVQGAA 224



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>P18405:S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 - Homo sapiens (Human)|
          Length = 259

 Score = 39.7 bits (91), Expect = 0.030
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = +3

Query: 651 EARDIIGWIMWAIGLFVEAIADQQKLKFKNSPSNRGKWCNVGLWSYTRHPNYFGEILLWW 830
           + R +IG+ +W  G+ +   +D      +       K    GL+ Y    NYFGEI+ W 
Sbjct: 148 DPRFLIGFGLWLTGMLINIHSDHILRNLRKPGDTGYKIPRGGLFEYVTAANYFGEIMEWC 207

Query: 831 GVFVASTPVLSGA 869
           G  +AS  V   A
Sbjct: 208 GYALASWSVQGAA 220



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>P24008:S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 - Rattus norvegicus (Rat)|
          Length = 259

 Score = 36.6 bits (83), Expect = 0.25
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = +3

Query: 663 IIGWIMWAIGLFVEAIADQQKLKFKNSPSNRGKWCNVGLWSYTRHPNYFGEILLWWGVFV 842
           + G+ +W +G+ +   +D      +       K    GL+ Y    NYFGE++ W G  +
Sbjct: 152 LTGFALWLVGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVSAANYFGELVEWCGFAL 211

Query: 843 AS 848
           AS
Sbjct: 212 AS 213



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>P23913:LBR_CHICK Lamin-B receptor - Gallus gallus (Chicken)|
          Length = 637

 Score = 35.8 bits (81), Expect = 0.43
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 13/63 (20%)
 Frame = +3

Query: 675 IMWAIGLFVEAIADQQKLKFKNSPSN------------RGKWCNV-GLWSYTRHPNYFGE 815
           I+  IG ++   A+ QK  F+ +P++             GK   V G W + RHPNY G+
Sbjct: 485 ILNCIGYYIFRSANSQKNNFRRNPADPKLSYLKVIPTATGKGLLVTGWWGFVRHPNYLGD 544

Query: 816 ILL 824
           I++
Sbjct: 545 IIM 547



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>P04929:HRPX_PLALO Histidine-rich glycoprotein precursor - Plasmodium lophurae|
          Length = 351

 Score = 35.8 bits (81), Expect = 0.43
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = +2

Query: 284 HRHRHRRVPAGVLHHHSSPPHRQGHRFRRQYKFHHNCGP 400
           H H H   P    HHH +P H   H     +  HH+  P
Sbjct: 176 HHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAP 214



 Score = 35.8 bits (81), Expect = 0.43
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +2

Query: 284 HRHRHRRVPAGVLHHHSSPPHRQGHRFRRQYKFHHNCG 397
           H H H   P    HHH +P H   H     +  HH+ G
Sbjct: 196 HHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHG 233



 Score = 35.4 bits (80), Expect = 0.57
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +2

Query: 284 HRHRHRRVPAGVLHHHSSPPHRQGHRFRRQYKFHHNCG 397
           H H H   P    HHH +P H   H     +  HH+ G
Sbjct: 186 HHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHG 223



 Score = 32.0 bits (71), Expect = 6.3
 Identities = 12/38 (31%), Positives = 14/38 (36%)
 Frame = +2

Query: 284 HRHRHRRVPAGVLHHHSSPPHRQGHRFRRQYKFHHNCG 397
           H H H   P    HHH    H   H     +  HH+ G
Sbjct: 206 HHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHG 243



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>Q38944:DET2_ARATH Probable steroid reductase DET2 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 262

 Score = 35.0 bits (79), Expect = 0.74
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = +3

Query: 657 RDIIGWIMWAIGLFVEAIADQQKLKFKNSPSNRGKWC--NVGLWSYTRHPNYFGEILLWW 830
           R +IG +++  G+++   +D+  ++ K    NRG +     G +     PNYFGE + W 
Sbjct: 152 RFVIGMVVFITGMYINITSDRTLVRLKKE--NRGGYVIPRGGWFELVSCPNYFGEAIEWL 209

Query: 831 G 833
           G
Sbjct: 210 G 210



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>Q3V0B4:CC108_MOUSE Coiled-coil domain-containing protein 108 - Mus musculus (Mouse)|
          Length = 1847

 Score = 35.0 bits (79), Expect = 0.74
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = -1

Query: 995  LVCAVFLRPAEALISR*LKKWNPTNEKKQERQEDGSQDYKPFSS*ENRS*CYKHPPPKEY 816
            L+C V+ R       + L++WN   EK ++  E    D K     + R+ C  H PPK+Y
Sbjct: 1451 LICKVYQRELMRQYHKELQEWN--EEKARQEVEFTITDRKV----KRRAYCAAHEPPKKY 1504

Query: 815  LPKVIWVASITPKTNITPLS-PIAWRI 738
                    ++ P TN  PL+ P  W +
Sbjct: 1505 -------KTLPPITNQPPLNRPATWNL 1524



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>P70545:S13A2_RAT Solute carrier family 13 member 2 - Rattus norvegicus (Rat)|
          Length = 587

 Score = 33.9 bits (76), Expect = 1.6
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = +3

Query: 279 ALTAIVTVGYQLVFFIITALLRIDKVTDFAGSTNFIIIAVLVAALKGT-WHF-RQIVLTV 452
           AL   VTV + +V F++  ++   +  ++   TN + +  L+ A+    W+  ++I L V
Sbjct: 53  ALPLAVTVLFPIVLFLLMGIMDASEGLEYFKDTNILFVGGLMVAIAVEHWNLHKRIALQV 112

Query: 453 LVIIWGLRLAVFLL 494
           L+II G+R A+ LL
Sbjct: 113 LLII-GVRAALLLL 125



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>Q9LDR4:ERG24_ARATH Delta(14)-sterol reductase - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 369

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
 Frame = +3

Query: 663 IIGWIMWAIGLFVEAIADQQKLKFKNSPSNR----------GKWCNVGLWSYTRHPNYFG 812
           ++  +++ IG  V   A++QK  FK +P             GK    G W   RH NY G
Sbjct: 245 VVNCLVFLIGYMVFRGANKQKHIFKKNPKTPIWGKPPVVVGGKLLVSGYWGIARHCNYLG 304

Query: 813 EILL 824
           +++L
Sbjct: 305 DLML 308



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>P06682:CO9_ONCMY Complement component C9 - Oncorhynchus mykiss (Rainbow trout)|
           (Salmo gairdneri)
          Length = 574

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = -2

Query: 622 TIVTGKLTVQT-QIA*KVQKTANFPKLLRISSNRLSSP-HCKILISKNTAKRSPQIITST 449
           TI   KLT +  Q   KV  +ANF   + I  +    P HCK  ++KNTA++  + +   
Sbjct: 336 TIKDKKLTERKLQDCIKVGISANFDTNIGIGGDAHIRPGHCKDTVNKNTAEKEGKALVDK 395

Query: 448 VNTI*RKCHVPFKAATRTAIMMKFVLPAKS 359
           V T+ R   +    A RT I  + ++  K+
Sbjct: 396 VITVVRGGTLEAAVAMRTQITKEGLMDVKT 425



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>A2IDD5:CCD78_HUMAN Coiled-coil domain-containing protein 78 - Homo sapiens (Human)|
          Length = 438

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 25/70 (35%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
 Frame = +2

Query: 245 GDGNSAGLPLPGAHRHRHRRVPAGVLHHHSS-PPHRQGHRFRRQYK-------FHHNCGP 400
           GDG S G  +P     RH R  A  L H +  P H   HRF+ Q K         H  G 
Sbjct: 104 GDGTSQGCAVPVESDPRHPRAAAQELRHKAQVPGHSDDHRFQVQPKNTMNPENEQHRLGS 163

Query: 401 GSSFEGNMAL 430
           G   E   AL
Sbjct: 164 GLQGEVKWAL 173



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>Q80VL3:LMO6_MOUSE LIM domain only protein 6 - Mus musculus (Mouse)|
          Length = 624

 Score = 32.3 bits (72), Expect = 4.8
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
 Frame = +2

Query: 266 LPLPGAHRHRHRRVPA---GVLHHHSSPPHRQGHRFRRQYKFHHNCGPGSSFEGNMALPS 436
           L  P A R R R  P       HHH     RQ HR R  +  HH+  PG        L S
Sbjct: 490 LSAPPAQRRRPRSPPPRTPSCHHHHHHRRRRQRHRRRGSHHHHHH--PGRHGHHRCDLGS 547

Query: 437 DRVDSACYNLGASLGSVLTNED 502
                +C +  +S  S  + +D
Sbjct: 548 GSDSGSCSSSPSSPSSESSEDD 569



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>Q09195:ERG24_SCHPO Delta(14)-sterol reductase - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 424

 Score = 32.3 bits (72), Expect = 4.8
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 13/61 (21%)
 Frame = +3

Query: 687 IGLFVEAIADQQKLKFKNSPSN------------RG-KWCNVGLWSYTRHPNYFGEILLW 827
           +G ++   A+ QK +F+++P++            RG K    G W   RH NYFG+ ++ 
Sbjct: 305 LGYYIFRGANGQKNRFRSNPNDPKLKHLKFIQTKRGTKLLTSGWWGMARHINYFGDWIMA 364

Query: 828 W 830
           W
Sbjct: 365 W 365



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>Q8WMV1:ERG24_BOVIN Delta(14)-sterol reductase - Bos taurus (Bovine)|
          Length = 418

 Score = 32.3 bits (72), Expect = 4.8
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 13/60 (21%)
 Frame = +3

Query: 684 AIGLFVEAIADQQKLKFKNSPSN------------RGKWCNV-GLWSYTRHPNYFGEILL 824
           A+G ++   A+ QK  F+ +PS+             G+   V G W   RHPNY G++++
Sbjct: 298 AVGYYIFRGANSQKNTFRKNPSDPRVADLETISTATGRRLLVSGWWGMVRHPNYLGDLIM 357



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>Q28983:ZAN_PIG Zonadhesin precursor - Sus scrofa (Pig)|
          Length = 2476

 Score = 25.8 bits (55), Expect(2) = 6.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 711  ADQQKLKFKNSPSNRGKWCNVGLWSYTRHPNYFGEILLWWGVFVASTPVLSGAEW 875
            ADQQ  + + SP +    CN  L +    P + G+++   GVF A  P L  + +
Sbjct: 971  ADQQCEENQVSPPS----CNTALQNTMSGPEFCGQLVAPHGVFEACLPHLRASSF 1021



 Score = 24.6 bits (52), Expect(2) = 6.0
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
 Frame = +1

Query: 895  SSWRSCFFSLVGFHFLSHLLISASAGL----RNTAHTRKPQAL*SHCRRSC 1035
            S ++SC F +  F  L H+L +  + L    ++  +T KP      C  +C
Sbjct: 1020 SFFKSCTFDMCNFQGLQHMLCAHMSALTENCQDAGYTVKPWRGPQFCPLAC 1070



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>Q9FG77:WRKY2_ARATH Probable WRKY transcription factor 2 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 687

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 9/70 (12%)
 Frame = +2

Query: 230 GKGALGDGNSAGLPLPGAHRHRHRRVPAGVLHHHSSPPHRQGHR---------FRRQYKF 382
           G G  G+GNS G      H H           HHS PP  +  R         F R + F
Sbjct: 555 GGGDSGNGNSGGSAAVSHHYHN---------GHHSEPPRGRFDRQVTTNNQSPFSRPFSF 605

Query: 383 HHNCGPGSSF 412
             + GP S F
Sbjct: 606 QPHLGPPSGF 615



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>O52520:TREZ_BREHE Malto-oligosyltrehalose trehalohydrolase - Brevibacterium helvolum|
          Length = 589

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
 Frame = +2

Query: 236 GALGDGNSAGLPLPGAHRHRHRRVPAGVLHH---HSSPPHR-QGHRFR 367
           G L DGN+  +P P     R RR+PAGV +H   ++ PP+R Q  R+R
Sbjct: 59  GYLLDGNTTPVPEP-----RSRRLPAGVHNHSRTYNPPPYRWQDSRWR 101



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>Q9Y566:SHAN1_HUMAN SH3 and multiple ankyrin repeat domains protein 1 - Homo sapiens|
            (Human)
          Length = 2161

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
 Frame = +2

Query: 269  PLPGAHRH-----RHRRVPAGVLHHHSSPPH 346
            PLP AH H      H   P    HHH+ PPH
Sbjct: 992  PLPPAHHHPPHHHHHHAPPPQPHHHHAHPPH 1022



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>O43900:LMO6_HUMAN LIM domain only protein 6 - Homo sapiens (Human)|
          Length = 615

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
 Frame = +2

Query: 266 LPLPGAHRHRHR----RVPAGVLHHHSSPPHRQGHRFRRQYKFHHNCGPGSSFEGNMALP 433
           L  P A R R R    R P+   HHH +  H       R+  +  + G GS  E   + P
Sbjct: 490 LSAPPAQRRRPRSPPPRAPSRRRHHHHNHHHHHNRHPSRRRHYQCDAGSGSDSESCSSSP 549

Query: 434 SDRVDSACYNLGASLG 481
           S     +  + G  LG
Sbjct: 550 SSSSSESSEDDGFFLG 565


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 253,372,250
Number of extensions: 6132437
Number of successful extensions: 17436
Number of sequences better than 10.0: 19
Number of HSP's gapped: 17343
Number of HSP's successfully gapped: 23
Length of query: 460
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 343
Effective length of database: 68,593,924
Effective search space: 23527715932
Effective search space used: 23527715932
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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