ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51j18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK108420:Os02g0754600 377 e-105
2AK066544:Os07g0102100 36 0.065
3AK111228: 31 2.7
4AK109694:Os03g0825900 31 2.7
5AK105581:Os08g0148300 31 2.7
6AK071766:Os02g0678400 30 4.7
7Os01g0242700:Os01g0242700 30 6.1
8AK105697:Os05g0586600 30 6.1
9AB096071:Os05g0586600 30 6.1
10AB096011:Os05g0586600 30 6.1
11AK106226:Os05g0115100 29 8.0

>AK108420:Os02g0754600 |
          Length = 380
 Score =  377 bits (969), Expect = e-105
 Identities = 205/286 (71%), Positives = 218/286 (76%), Gaps = 9/286 (3%)
 Frame = +3

Query: 432  RAGAGATAVASTCVERALGHVLWVASRLPVASRKYELVRGLAERLLDEN--NVXXXXXXX 605
            RA  G  A AS CV RAL HVL VASRLPVASRKYELVRGLAERLLD+N           
Sbjct: 99   RADPGCPAGAS-CVGRALAHVLSVASRLPVASRKYELVRGLAERLLDDNARGGGARIGAV 157

Query: 606  XXXXXXXXFERTLRQLEASAGGEWGPPGMELAVRAVRSGVRWWRPTIAALEGSDAFGGPX 785
                    F RTLRQL+A+AGGEW  PGMELAVRAVR+G+RWWRPT AAL+  D FGGP 
Sbjct: 158  NRAALSGAFARTLRQLDAAAGGEW--PGMELAVRAVRTGMRWWRPTAAALD--DGFGGPA 213

Query: 786  XXXXXXXXXXXGQKMAECGAAREAAVQFGAASRLGSRALVAEPTLQVALLRLAVFLFRHA 965
                       GQKMAECGAAREAA QFGAASRLGSRALVAEPTLQVALLRLAVFLF+HA
Sbjct: 214  AEKLAAELLWLGQKMAECGAAREAAAQFGAASRLGSRALVAEPTLQVALLRLAVFLFKHA 273

Query: 966  NSVEFEQEEGK-------AEHRMAMLRSWLPLLCRGSNGTDAPVLSGRERAEMVTVLEEL 1124
            NS EFE   G        AE R+++LRSWLPLLCRGSNGTDAPVLS +ER EMV VL+EL
Sbjct: 274  NSREFEPSPGGNEDKGAIAEQRVSLLRSWLPLLCRGSNGTDAPVLSSKERTEMVAVLDEL 333

Query: 1125 IEKLRWEQQEEALALWLHHFAACPDTDWPNLERCYTRWYAESRKLL 1262
            I KL WEQQEE LALWLHHFAACPDTDWPNLE CYTRWYAESR+LL
Sbjct: 334  IGKLGWEQQEEILALWLHHFAACPDTDWPNLESCYTRWYAESRRLL 379



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>AK066544:Os07g0102100 |
          Length = 808

 Score = 36.2 bits (82), Expect = 0.065
 Identities = 48/162 (29%), Positives = 62/162 (38%), Gaps = 15/162 (9%)
 Frame = -1

Query: 1084 PLSTGASVPLLPRQSSGSHDRSIAIRCSALPSSCSNS------TELACLNRNTASRSSAT 923
            P ST AS    P  SS S   S     S+  SS S S      TE A L+ +T S  +  
Sbjct: 37   PPSTAASAT--PTTSSASSPSSSTASSSSPSSSTSTSPSAPTTTETAALSPSTPSSPATP 94

Query: 922  WSVGSATS---------ARLPRRDAAPNCTAASRAAPHSAIFCXXXXXXXXXXXXXXXXX 770
             S  S TS         +  P R AAP  ++AS   P SA                    
Sbjct: 95   RSASSPTSRPRTSSTSTSASPPRSAAPP-SSASPPPPRSA-----------PSGSRTSSR 142

Query: 769  XSLPSSAAMVGLHHRTPDLTARTASSIPGGPHSPPADASSCR 644
             + PS++         P  ++ T +S P  P SPP+ AS  R
Sbjct: 143  TAAPSASPSSSSPSSPPPWSSATPASRPPSPSSPPSVASRTR 184



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>AK111228: |
          Length = 764

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 23/87 (26%), Positives = 33/87 (37%)
 Frame = -1

Query: 1084 PLSTGASVPLLPRQSSGSHDRSIAIRCSALPSSCSNSTELACLNRNTASRSSATWSVGSA 905
            P+S    +    R   G H RS +   S           L+  N  TA R  +     S 
Sbjct: 181  PISRPGLIDAANRGGRGQHQRSSSQGSSRSARRADRPAALSVPNAPTARRRQSDQGQPSG 240

Query: 904  TSARLPRRDAAPNCTAASRAAPHSAIF 824
            T AR   R++    T+A+ A+P    F
Sbjct: 241  TDARQQFRNSLQTSTSANPASPRGLGF 267



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>AK109694:Os03g0825900 |
          Length = 323

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 42/149 (28%), Positives = 60/149 (40%), Gaps = 4/149 (2%)
 Frame = -1

Query: 1084 PLSTGASVPLLPRQSSGSHDRSIAIRCSALPSSCS--NSTELACLNRNTASRSSATWSVG 911
            P +T +S P   R+S             A PSS +   S+ LA     T   ++A  +  
Sbjct: 32   PPATSSSTPTTARRSKRLAGAPPDHPAEAGPSSTNARRSSRLAGAPPATPGAAAAAPTSS 91

Query: 910  SATSARLPRR--DAAPNCTAASRAAPHSAIFCXXXXXXXXXXXXXXXXXXSLPSSAAMVG 737
            S T+AR   R   A P+  AA  A P S+                     S P +AA  G
Sbjct: 92   SPTAARRSNRLAGAPPDPPAAVAAPPTSS------SPTTAMRSNRLAGAPSDPPAAATAG 145

Query: 736  LHHRTPDLTARTASSIPGGPHSPPADASS 650
                +P  TAR ++ + G P  PPA A++
Sbjct: 146  PTSPSPT-TARRSNRLAGAPPDPPAAATA 173



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>AK105581:Os08g0148300 |
          Length = 344

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = -1

Query: 1078 STGASVPLLPRQ----SSGSHDRSIAIRCSALPSSCSNSTELACLNRNTASRSSATWSVG 911
            ST +S    PR+    + G+   S + R SA  ++ ++       +    S S+ TW   
Sbjct: 252  STSSSTAPPPRRGRAGTPGTRSPSASRRASATSTTTASPPSRTATSSPATSSSTTTWRHA 311

Query: 910  SATSARLPRRDAAP 869
            S TSA  PRR  AP
Sbjct: 312  SPTSAS-PRRSRAP 324



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>AK071766:Os02g0678400 |
          Length = 203

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 1084 PLSTGASVPLLPRQSSGSHDRSIAIRCSALPS-SCSNSTELACLNRNTASRSSATWS 917
            P STGA  P  PR S+ +    +    SA P+ SCS++T  A  +  T + SSA  S
Sbjct: 123  PTSTGAR-PTAPRPSAPTSAARLRSPTSAAPAASCSSTTPRAASSSTTPATSSAQGS 178



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>Os01g0242700:Os01g0242700 |
          Length = 458

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 24/90 (26%), Positives = 35/90 (38%)
 Frame = -1

Query: 913 GSATSARLPRRDAAPNCTAASRAAPHSAIFCXXXXXXXXXXXXXXXXXXSLPSSAAMVGL 734
           G+AT++  P  DAA     A+R  P +A                      L ++A    L
Sbjct: 360 GAATASSRPSGDAAATPPPAARPPPSAAA--------------PAALSRRLRAAALSPHL 405

Query: 733 HHRTPDLTARTASSIPGGPHSPPADASSCR 644
            HR P   +  A + P  P +PP  A+  R
Sbjct: 406 RHRRPPTVSPRAPAPPVRPRTPPLAATRAR 435



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>AK105697:Os05g0586600 |
          Length = 222

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 760 PSSAAMVGLHHRTPDLTARTASSIPGGPHSPPADASSCRSV 638
           PS     G H R+P  +A    S+ GGP      ++SC ++
Sbjct: 8   PSRPVSAGCHRRSPRRSAPVVLSLGGGPRRRTPSSTSCSAL 48



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>AB096071:Os05g0586600 |
          Length = 500

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 760 PSSAAMVGLHHRTPDLTARTASSIPGGPHSPPADASSCRSV 638
           PS     G H R+P  +A    S+ GGP      ++SC ++
Sbjct: 8   PSRPVSAGCHRRSPRRSAPVVLSLGGGPRRRTPSSTSCSAL 48



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>AB096011:Os05g0586600 |
          Length = 500

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 760 PSSAAMVGLHHRTPDLTARTASSIPGGPHSPPADASSCRSV 638
           PS     G H R+P  +A    S+ GGP      ++SC ++
Sbjct: 8   PSRPVSAGCHRRSPRRSAPVVLSLGGGPRRRTPSSTSCSAL 48



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>AK106226:Os05g0115100 |
          Length = 270

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = -3

Query: 1256 LPRLGVPPGVAALEVGPVGVRAGGEV 1179
            LPR   PP VA L+  PVGVRAGG V
Sbjct: 191  LPRWRNPPPVA-LDTLPVGVRAGGAV 215


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,355,630
Number of extensions: 452735
Number of successful extensions: 1831
Number of sequences better than 10.0: 11
Number of HSP's gapped: 1823
Number of HSP's successfully gapped: 11
Length of query: 518
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 413
Effective length of database: 11,195,550
Effective search space: 4623762150
Effective search space used: 4623762150
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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