ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf51j18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P14328:SP96_DICDI Spore coat protein SP96 - Dictyostelium discoi... 32 9.5

>P14328:SP96_DICDI Spore coat protein SP96 - Dictyostelium discoideum (Slime mold)|
          Length = 600
 Score = 31.6 bits (70), Expect = 9.5
 Identities = 22/83 (26%), Positives = 43/83 (51%)
 Frame = -1

Query: 1078 STGASVPLLPRQSSGSHDRSIAIRCSALPSSCSNSTELACLNRNTASRSSATWSVGSATS 899
            S+ +    +   +SGS   S +   SA  SS S+S   +  + + AS S ++ +  S++ 
Sbjct: 438  SSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSP 497

Query: 898  ARLPRRDAAPNCTAASRAAPHSA 830
            +      +AP+ +A+S +AP S+
Sbjct: 498  SSSASSSSAPSSSASSSSAPSSS 520


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 141,922,458
Number of extensions: 2486771
Number of successful extensions: 8676
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8672
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 400
Effective length of database: 68,319,629
Effective search space: 27327851600
Effective search space used: 27327851600
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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