ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38g22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q05927:5NTD_BOVIN 5'-nucleotidase precursor - Bos taurus (Bovine) 31 6.1

>Q05927:5NTD_BOVIN 5'-nucleotidase precursor - Bos taurus (Bovine)|
          Length = 574
 Score = 31.2 bits (69), Expect = 6.1
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
 Frame = +3

Query: 297 SRNPNDRVGIFYRRLDVFVTYRDEPVTVPVSLPPMYQGHRDVTIWSPVLSG----ESVPV 464
           SRNP DRV     +L+V  T    P   P+ +  +Y+    V + S ++SG    + +  
Sbjct: 462 SRNPGDRVV----KLEVLCTQCRVPSYEPLRMDKVYK----VILPSFLVSGGDGFQMIKD 513

Query: 465 AGYVAEAMKQDI--AAGYVS----LLVKIDGRVKWKVGSWVSGSYHL 587
                ++  QDI   +GY+S    L   ++GR+++  GS   GS+ L
Sbjct: 514 EKIKHDSGDQDINVVSGYISKMKVLYPAVEGRIQFSAGSHCCGSFSL 560


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 108,525,549
Number of extensions: 1811005
Number of successful extensions: 5862
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5860
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 100,686,439
Length adjustment: 113
Effective length of query: 194
Effective length of database: 69,691,104
Effective search space: 13520074176
Effective search space used: 13520074176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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