| Clone Name | FLbaf38c21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK065166:Os02g0736500 | 984 | 0.0 | 2 | AK064841:Os08g0102100 | 44 | 4e-04 | 3 | AK067387:Os03g0152700 | 30 | 0.47 | 4 | AK068914:Os02g0187400 | 33 | 1.2 | 5 | Os02g0272400:Os02g0272400 | 30 | 7.7 | 6 | AK065965:Os05g0317900 | 30 | 7.7 |
|---|
>AK065166:Os02g0736500 | Length = 671 Score = 984 bits (2545), Expect = 0.0 Identities = 490/646 (75%), Positives = 540/646 (83%), Gaps = 1/646 (0%) Frame = +3 Query: 144 SGDAATLESVPDLVKAMYVNIESFPCVRLLNLSGEIGCSNPGHGLVIAPIVRFKNSNDQL 323 SGDAATLESVPDLVKAMY+N+ESFPCVRLLN SG++GCSNPGH VIAPIVRF N NDQL Sbjct: 26 SGDAATLESVPDLVKAMYINVESFPCVRLLNHSGQVGCSNPGHDKVIAPIVRFGNRNDQL 85 Query: 324 AEPSAVLLPLDQMPAFFLRVSNDPELYHKVAGVLVESNG-DKLLELSPDRKFPQGDFAPY 500 +PSAVLLPL+QM FFLRVSNDPELY K+AGVLVE+NG D +LE SPDRKFPQ FAPY Sbjct: 86 VQPSAVLLPLNQMTDFFLRVSNDPELYRKIAGVLVEANGVDNMLEFSPDRKFPQQAFAPY 145 Query: 501 SNVSHDWNPAGSGIMWNRYDFPAFLLSEESTQTLRKIADKNEKSNNGYQANVAEFDLVMQ 680 SN+SH WNP GSGIMWN+YDFP FLLSEESTQTL+ +ADKNEKS NGY ANVAEFDLVMQ Sbjct: 146 SNLSHHWNPTGSGIMWNKYDFPVFLLSEESTQTLQNLADKNEKSANGYLANVAEFDLVMQ 205 Query: 681 TTKAETHGSEACLKEQSCLPLGGQSVWASLPPMSNASKEHQKPIIMVVASQDSASFFRDR 860 TTKA TH SE+CL+EQSCLPLGGQSVW SLPP+SN+S +HQKPIIMV ASQDSASFFRDR Sbjct: 206 TTKAGTHDSESCLREQSCLPLGGQSVWTSLPPISNSSTKHQKPIIMVTASQDSASFFRDR 265 Query: 861 SLGADSPISGLIALLTAVDALSHLHDLGKLKKQLVFAAFDGEAWGYLGSRKFLQELDEGD 1040 SLGADSPISGLIALLTAVDALSHLHD+ LKKQLVFA F+GEAWGYLGSRKFLQELD+G Sbjct: 266 SLGADSPISGLIALLTAVDALSHLHDISNLKKQLVFAVFNGEAWGYLGSRKFLQELDQGA 325 Query: 1041 DSVNGINSSMIEQVLEIGSVGKGISQGDTLFYAHASRNSSISKKIXXXXXXXXXXXXXXN 1220 DSVNGI+S +I+QVLEIGSVGK ISQG LFYAHA+ NSSIS K+ N Sbjct: 326 DSVNGISSLLIDQVLEIGSVGKAISQGYPLFYAHAAGNSSISMKMVDALQSASESLGSDN 385 Query: 1221 VKVKPAASSNPGVPPSSLMSFMRKNTSTSGVVLEDFDSQFSNKFYHSHLDSPXXXXXXXX 1400 VKVKPAASSNPGVPPSSLMSF+ KN+ST G+VLEDFDSQFSN+FYHS LD P Sbjct: 386 VKVKPAASSNPGVPPSSLMSFLGKNSSTPGLVLEDFDSQFSNRFYHSTLDGPANVNSSSI 445 Query: 1401 XXXXXLVARSLYILATADMPVDLMTLNTIKVNVTLVEELIGCLLTCDPGLSCDIVKSFIS 1580 L+ARSLYILA+AD+P+DL+TLNTIKVNV+LVEELIGCLL CDPGLSC IVKSFIS Sbjct: 446 AAAAALIARSLYILASADLPIDLITLNTIKVNVSLVEELIGCLLKCDPGLSCGIVKSFIS 505 Query: 1581 PSNTCPSHYVGVFQDSPSSTQSPAYADDTSRFIWNFLADRTSTLAGNVSSCTGQCSNXXX 1760 PSN+CPSHYVGVFQD P+ TQ P+YADD SRFIWNFLADRTS+LAGN SSCTGQC + Sbjct: 506 PSNSCPSHYVGVFQDLPAGTQFPSYADDISRFIWNFLADRTSSLAGNSSSCTGQCHDEGE 565 Query: 1761 XXXXXXXXXXXXXXXXTTRYVPAYSTRLKFEDNAWHVLPANSSDPMGAADPIWTESYWNT 1940 TTRYVPAYSTRLKFEDN WHVLP NSSDP AADP+WTES+WNT Sbjct: 566 ICVGAEVEGGGRCVVSTTRYVPAYSTRLKFEDNVWHVLPVNSSDPFSAADPVWTESFWNT 625 Query: 1941 IGLRVYAVQSTTSDRLILLAGLAVTAASYLGVVVGRGYISKMTKRD 2078 IGLRVYAVQ+T+ D L+LL G+ +T ASY V+VGR YISK+ KRD Sbjct: 626 IGLRVYAVQATSYDWLVLLIGIIITVASYFAVIVGRSYISKIIKRD 671
>AK064841:Os08g0102100 | Length = 555 Score = 44.3 bits (103), Expect = 4e-04 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 2/147 (1%) Frame = +3 Query: 600 LRKIADKNEKSNNGYQANVAEFDLVMQTTKAETHGSEACLKEQSCLPLGGQSVWASLPPM 779 +RKIA + ++ A + LV+ T + S Q W LP + Sbjct: 160 IRKIASSGQPAS----ATTGGYKLVVSTPEPRKVASPTISNIQG---------W--LPGL 204 Query: 780 SNASKEHQKPIIMVVASQDSASFFRDRSLGADSPISGLIALLTAVDALSHLHDLGKL--K 953 + Q P I +V++ D+ S+G+DS SG +ALL S L+ K K Sbjct: 205 KGEGETEQLPTIAIVSNYDTFGAAPALSVGSDSNGSGAVALLEIARLFSRLYSNPKTRGK 264 Query: 954 KQLVFAAFDGEAWGYLGSRKFLQELDE 1034 L+F G + Y G+ K+L+ D+ Sbjct: 265 YNLLFGLTSGGPYNYNGTNKWLRSFDQ 291
>AK067387:Os03g0152700 | Length = 415 Score = 30.4 bits (67), Expect(2) = 0.47 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +3 Query: 1251 PGVPPSSLMSFMRKNTSTSGVVLEDFDSQFSNKFYH 1358 PGVP L + R + +TSG+++ D +F+ K H Sbjct: 271 PGVPKPRLFTVGRLDVATSGLIIITNDGEFAQKLSH 306 Score = 22.3 bits (46), Expect(2) = 0.47 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = +2 Query: 1109 HKPRGYIILCTCFKEFINFKEDF 1177 +KP+GYI C K I+ +D+ Sbjct: 240 NKPKGYICSCGEPKSIISLFDDY 262
>AK068914:Os02g0187400 | Length = 703 Score = 32.7 bits (73), Expect = 1.2 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 6/180 (3%) Frame = +3 Query: 588 STQTLRKIADKNEKSNNGYQANVAEFDLV---MQTTKAETHG--SEACLKEQSCLPLGGQ 752 ST + KI+ +E N ++ + FDL +QT K + G ++A LK G+ Sbjct: 415 STSFMTKISTVSEIQN---KSGIFSFDLTWSEIQTLKPDLLGPYTQAGLKRNPAAKNAGK 471 Query: 753 SVWASLPPMSNASKEHQKPIIMVVASQDSASFFRDRSLGADSPISGLIALLTAVDALSHL 932 V +LP + +K IMV + ASF R LG +SG +A + HL Sbjct: 472 FV--TLPEFLDLAKATNVSGIMV--EMEHASFLAKRGLGLVDAVSGALANASYDKEGGHL 527 Query: 933 HDLGKLKKQL-VFAAFDGEAWGYLGSRKFLQELDEGDDSVNGINSSMIEQVLEIGSVGKG 1109 +L + V AAF + R+ L +DE + + I+Q +VG+G Sbjct: 528 PELMVVSDDTSVLAAFK----KFPAFRRVLM-VDETISDASAPSVEEIKQFATAVTVGRG 582
>Os02g0272400:Os02g0272400 | Length = 292 Score = 30.0 bits (66), Expect = 7.7 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 9/79 (11%) Frame = +3 Query: 882 ISGLIALLTAVDALSHLHDLGKLKKQLVFAAFDGEAWG----YLGSRKFLQE-----LDE 1034 I GL+A++ L+ LG +F ++ AWG Y G+ FL+ LDE Sbjct: 163 IFGLMAIILGSTLLA----LGSSCSVPLFWCYEITAWGLVILYAGTAFFLRRKAAVILDE 218 Query: 1035 GDDSVNGINSSMIEQVLEI 1091 GD + + + M+E +E+ Sbjct: 219 GDYTPHNVGLEMLETTIEV 237
>AK065965:Os05g0317900 | Length = 846 Score = 30.0 bits (66), Expect = 7.7 Identities = 12/42 (28%), Positives = 24/42 (57%) Frame = +1 Query: 1144 LQGIHQFQRRF*MVSKVAVIHLALIMSK*NQQLHQTLVYHHL 1269 +QG+H+FQ ++SK+ HL ++ ++ LVY ++ Sbjct: 549 VQGVHEFQTEIELLSKLRYCHLVSLIGYCKEKNEMILVYEYM 590 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 68,953,702 Number of extensions: 1616511 Number of successful extensions: 4664 Number of sequences better than 10.0: 6 Number of HSP's gapped: 4661 Number of HSP's successfully gapped: 7 Length of query: 799 Length of database: 15,399,855 Length adjustment: 109 Effective length of query: 690 Effective length of database: 11,035,386 Effective search space: 7614416340 Effective search space used: 7614416340 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)