ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf38c21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK065166:Os02g0736500 984 0.0
2AK064841:Os08g0102100 44 4e-04
3AK067387:Os03g0152700 30 0.47
4AK068914:Os02g0187400 33 1.2
5Os02g0272400:Os02g0272400 30 7.7
6AK065965:Os05g0317900 30 7.7

>AK065166:Os02g0736500 |
          Length = 671
 Score =  984 bits (2545), Expect = 0.0
 Identities = 490/646 (75%), Positives = 540/646 (83%), Gaps = 1/646 (0%)
 Frame = +3

Query: 144  SGDAATLESVPDLVKAMYVNIESFPCVRLLNLSGEIGCSNPGHGLVIAPIVRFKNSNDQL 323
            SGDAATLESVPDLVKAMY+N+ESFPCVRLLN SG++GCSNPGH  VIAPIVRF N NDQL
Sbjct: 26   SGDAATLESVPDLVKAMYINVESFPCVRLLNHSGQVGCSNPGHDKVIAPIVRFGNRNDQL 85

Query: 324  AEPSAVLLPLDQMPAFFLRVSNDPELYHKVAGVLVESNG-DKLLELSPDRKFPQGDFAPY 500
             +PSAVLLPL+QM  FFLRVSNDPELY K+AGVLVE+NG D +LE SPDRKFPQ  FAPY
Sbjct: 86   VQPSAVLLPLNQMTDFFLRVSNDPELYRKIAGVLVEANGVDNMLEFSPDRKFPQQAFAPY 145

Query: 501  SNVSHDWNPAGSGIMWNRYDFPAFLLSEESTQTLRKIADKNEKSNNGYQANVAEFDLVMQ 680
            SN+SH WNP GSGIMWN+YDFP FLLSEESTQTL+ +ADKNEKS NGY ANVAEFDLVMQ
Sbjct: 146  SNLSHHWNPTGSGIMWNKYDFPVFLLSEESTQTLQNLADKNEKSANGYLANVAEFDLVMQ 205

Query: 681  TTKAETHGSEACLKEQSCLPLGGQSVWASLPPMSNASKEHQKPIIMVVASQDSASFFRDR 860
            TTKA TH SE+CL+EQSCLPLGGQSVW SLPP+SN+S +HQKPIIMV ASQDSASFFRDR
Sbjct: 206  TTKAGTHDSESCLREQSCLPLGGQSVWTSLPPISNSSTKHQKPIIMVTASQDSASFFRDR 265

Query: 861  SLGADSPISGLIALLTAVDALSHLHDLGKLKKQLVFAAFDGEAWGYLGSRKFLQELDEGD 1040
            SLGADSPISGLIALLTAVDALSHLHD+  LKKQLVFA F+GEAWGYLGSRKFLQELD+G 
Sbjct: 266  SLGADSPISGLIALLTAVDALSHLHDISNLKKQLVFAVFNGEAWGYLGSRKFLQELDQGA 325

Query: 1041 DSVNGINSSMIEQVLEIGSVGKGISQGDTLFYAHASRNSSISKKIXXXXXXXXXXXXXXN 1220
            DSVNGI+S +I+QVLEIGSVGK ISQG  LFYAHA+ NSSIS K+              N
Sbjct: 326  DSVNGISSLLIDQVLEIGSVGKAISQGYPLFYAHAAGNSSISMKMVDALQSASESLGSDN 385

Query: 1221 VKVKPAASSNPGVPPSSLMSFMRKNTSTSGVVLEDFDSQFSNKFYHSHLDSPXXXXXXXX 1400
            VKVKPAASSNPGVPPSSLMSF+ KN+ST G+VLEDFDSQFSN+FYHS LD P        
Sbjct: 386  VKVKPAASSNPGVPPSSLMSFLGKNSSTPGLVLEDFDSQFSNRFYHSTLDGPANVNSSSI 445

Query: 1401 XXXXXLVARSLYILATADMPVDLMTLNTIKVNVTLVEELIGCLLTCDPGLSCDIVKSFIS 1580
                 L+ARSLYILA+AD+P+DL+TLNTIKVNV+LVEELIGCLL CDPGLSC IVKSFIS
Sbjct: 446  AAAAALIARSLYILASADLPIDLITLNTIKVNVSLVEELIGCLLKCDPGLSCGIVKSFIS 505

Query: 1581 PSNTCPSHYVGVFQDSPSSTQSPAYADDTSRFIWNFLADRTSTLAGNVSSCTGQCSNXXX 1760
            PSN+CPSHYVGVFQD P+ TQ P+YADD SRFIWNFLADRTS+LAGN SSCTGQC +   
Sbjct: 506  PSNSCPSHYVGVFQDLPAGTQFPSYADDISRFIWNFLADRTSSLAGNSSSCTGQCHDEGE 565

Query: 1761 XXXXXXXXXXXXXXXXTTRYVPAYSTRLKFEDNAWHVLPANSSDPMGAADPIWTESYWNT 1940
                            TTRYVPAYSTRLKFEDN WHVLP NSSDP  AADP+WTES+WNT
Sbjct: 566  ICVGAEVEGGGRCVVSTTRYVPAYSTRLKFEDNVWHVLPVNSSDPFSAADPVWTESFWNT 625

Query: 1941 IGLRVYAVQSTTSDRLILLAGLAVTAASYLGVVVGRGYISKMTKRD 2078
            IGLRVYAVQ+T+ D L+LL G+ +T ASY  V+VGR YISK+ KRD
Sbjct: 626  IGLRVYAVQATSYDWLVLLIGIIITVASYFAVIVGRSYISKIIKRD 671



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>AK064841:Os08g0102100 |
          Length = 555

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
 Frame = +3

Query: 600  LRKIADKNEKSNNGYQANVAEFDLVMQTTKAETHGSEACLKEQSCLPLGGQSVWASLPPM 779
            +RKIA   + ++    A    + LV+ T +     S      Q          W  LP +
Sbjct: 160  IRKIASSGQPAS----ATTGGYKLVVSTPEPRKVASPTISNIQG---------W--LPGL 204

Query: 780  SNASKEHQKPIIMVVASQDSASFFRDRSLGADSPISGLIALLTAVDALSHLHDLGKL--K 953
                +  Q P I +V++ D+       S+G+DS  SG +ALL      S L+   K   K
Sbjct: 205  KGEGETEQLPTIAIVSNYDTFGAAPALSVGSDSNGSGAVALLEIARLFSRLYSNPKTRGK 264

Query: 954  KQLVFAAFDGEAWGYLGSRKFLQELDE 1034
              L+F    G  + Y G+ K+L+  D+
Sbjct: 265  YNLLFGLTSGGPYNYNGTNKWLRSFDQ 291



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>AK067387:Os03g0152700 |
          Length = 415

 Score = 30.4 bits (67), Expect(2) = 0.47
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 1251 PGVPPSSLMSFMRKNTSTSGVVLEDFDSQFSNKFYH 1358
            PGVP   L +  R + +TSG+++   D +F+ K  H
Sbjct: 271  PGVPKPRLFTVGRLDVATSGLIIITNDGEFAQKLSH 306



 Score = 22.3 bits (46), Expect(2) = 0.47
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 1109 HKPRGYIILCTCFKEFINFKEDF 1177
            +KP+GYI  C   K  I+  +D+
Sbjct: 240  NKPKGYICSCGEPKSIISLFDDY 262



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>AK068914:Os02g0187400 |
          Length = 703

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 6/180 (3%)
 Frame = +3

Query: 588  STQTLRKIADKNEKSNNGYQANVAEFDLV---MQTTKAETHG--SEACLKEQSCLPLGGQ 752
            ST  + KI+  +E  N   ++ +  FDL    +QT K +  G  ++A LK        G+
Sbjct: 415  STSFMTKISTVSEIQN---KSGIFSFDLTWSEIQTLKPDLLGPYTQAGLKRNPAAKNAGK 471

Query: 753  SVWASLPPMSNASKEHQKPIIMVVASQDSASFFRDRSLGADSPISGLIALLTAVDALSHL 932
             V  +LP   + +K      IMV    + ASF   R LG    +SG +A  +      HL
Sbjct: 472  FV--TLPEFLDLAKATNVSGIMV--EMEHASFLAKRGLGLVDAVSGALANASYDKEGGHL 527

Query: 933  HDLGKLKKQL-VFAAFDGEAWGYLGSRKFLQELDEGDDSVNGINSSMIEQVLEIGSVGKG 1109
             +L  +     V AAF      +   R+ L  +DE     +  +   I+Q     +VG+G
Sbjct: 528  PELMVVSDDTSVLAAFK----KFPAFRRVLM-VDETISDASAPSVEEIKQFATAVTVGRG 582



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>Os02g0272400:Os02g0272400 |
          Length = 292

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
 Frame = +3

Query: 882  ISGLIALLTAVDALSHLHDLGKLKKQLVFAAFDGEAWG----YLGSRKFLQE-----LDE 1034
            I GL+A++     L+    LG      +F  ++  AWG    Y G+  FL+      LDE
Sbjct: 163  IFGLMAIILGSTLLA----LGSSCSVPLFWCYEITAWGLVILYAGTAFFLRRKAAVILDE 218

Query: 1035 GDDSVNGINSSMIEQVLEI 1091
            GD + + +   M+E  +E+
Sbjct: 219  GDYTPHNVGLEMLETTIEV 237



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>AK065965:Os05g0317900 |
          Length = 846

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +1

Query: 1144 LQGIHQFQRRF*MVSKVAVIHLALIMSK*NQQLHQTLVYHHL 1269
            +QG+H+FQ    ++SK+   HL  ++    ++    LVY ++
Sbjct: 549  VQGVHEFQTEIELLSKLRYCHLVSLIGYCKEKNEMILVYEYM 590


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 68,953,702
Number of extensions: 1616511
Number of successful extensions: 4664
Number of sequences better than 10.0: 6
Number of HSP's gapped: 4661
Number of HSP's successfully gapped: 7
Length of query: 799
Length of database: 15,399,855
Length adjustment: 109
Effective length of query: 690
Effective length of database: 11,035,386
Effective search space: 7614416340
Effective search space used: 7614416340
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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