| Clone Name | FLbaf38c21 |
|---|---|
| Clone Library Name | barley_pub |
>Q8GUM5:NICA_ARATH Nicastrin precursor - Arabidopsis thaliana (Mouse-ear cress)| Length = 676 Score = 670 bits (1728), Expect = 0.0 Identities = 335/648 (51%), Positives = 432/648 (66%), Gaps = 5/648 (0%) Frame = +3 Query: 150 DAATLESVPDLVKAMYVNIESFPCVRLLNLSGEIGCSNPGHGLVIAPIVRFKNSNDQLAE 329 + ++ESVPDL K MYV ++ FPCVRLLNLSGEIGCSNPG V+API++ K+ D L + Sbjct: 30 EITSIESVPDLQKLMYVAVDGFPCVRLLNLSGEIGCSNPGINKVVAPIIKLKDVKD-LVQ 88 Query: 330 PSAVLLPLDQMPAFFLRVSNDPELYHKVAGVLVESNGD---KLLELSPDRKFPQGDFAPY 500 P +L+ D+M FF RVS D K+ GVLVES + KL SPD++FPQ F+PY Sbjct: 89 PHTILVTADEMEDFFTRVSTDLSFASKIGGVLVESGSNFQQKLKGFSPDKRFPQAQFSPY 148 Query: 501 SNVSHDWNPAGSGIMWNRYDFPAFLLSEESTQTLRKIADKNEKSNNGYQANVAEFDLVMQ 680 NV + WN A S IMW Y+FP +LLSE + +I K + + Y ++VAEF++VM+ Sbjct: 149 ENVEYKWNSAASSIMWRNYNFPVYLLSESGISAVHEILSKKKMKHGTYTSDVAEFNMVME 208 Query: 681 TTKAETHGSEACLKEQSCLPLGGQSVWASLPPMSNASKEHQKPIIMVVASQDSASFFRDR 860 TTKA TH SEACL+E +CLPLGG SVW+SLPP+S +S ++KP+++ VAS D+ASFFRD+ Sbjct: 209 TTKAGTHNSEACLQEGTCLPLGGYSVWSSLPPISVSSSNNRKPVVLTVASMDTASFFRDK 268 Query: 861 SLGADSPISGLIALLTAVDALSHLHDLGKLKKQLVFAAFDGEAWGYLGSRKFLQELDEGD 1040 S GADSPISGL+ALL AVDALS + + LKKQLVF GE WGYLGSR+FL ELD Sbjct: 269 SFGADSPISGLVALLGAVDALSRVDGISNLKKQLVFLVLTGETWGYLGSRRFLHELDLHS 328 Query: 1041 DSVNGINSSMIEQVLEIGSVGKGISQGDTLFYAHASRNSSISKKIXXXXXXXXXXXXXXN 1220 D+V G++++ IE VLEIGSVGKG+S G F+AH +R SS++ N Sbjct: 329 DAVAGLSNTSIETVLEIGSVGKGLSGGINTFFAHKTRVSSVTNMTLDALKIAQDSLASKN 388 Query: 1221 VKVKPAASSNPGVPPSSLMSFMRKNTSTSGVVLEDFDSQFSNKFYHSHLDSPXXXXXXXX 1400 +K+ A ++NPG+PPSSLM+FMRKN TS VVLEDFD+ F NKFYHSHLD Sbjct: 389 IKILSADTANPGIPPSSLMAFMRKNPQTSAVVLEDFDTNFVNKFYHSHLDDLSNINSSSV 448 Query: 1401 XXXXXLVARSLYILATADMPVDLMTLNTIKVNVTLVEELIGCLLTCDPGLSCDIVKSFIS 1580 +VAR+LYILA+ + L +I VN + VEEL+ CLL C+PGLSC++VK +IS Sbjct: 449 VAAASVVARTLYILASDNKDTSNSALGSIHVNASFVEELLTCLLACEPGLSCNLVKDYIS 508 Query: 1581 PSNTCPSHYVGVFQDSPSSTQSPAYADDTSRFIWNFLADRTSTLAGNVSS-CT-GQCSNX 1754 P+NTCP +Y GV PSS Y D SRF+WNFLAD+TS GN +S C+ G CS Sbjct: 509 PTNTCPGNYAGVILGEPSSKPYLGYVGDVSRFLWNFLADKTSVQKGNTTSVCSKGVCSKT 568 Query: 1755 XXXXXXXXXXXXXXXXXXTTRYVPAYSTRLKFEDNAWHVLPANSSDPMGAADPIWTESYW 1934 TTRYVPAYSTRLK+ D AW +LP NSSD MG DP+WTES W Sbjct: 569 DEVCIKAESNKEGTCVVSTTRYVPAYSTRLKYNDGAWTILPQNSSDSMGMVDPVWTESNW 628 Query: 1935 NTIGLRVYAVQSTTSDRLILLAGLAVTAASYLGVVVGRGYISKMTKRD 2078 +T+ + VY VQ + D +L+AG+ VT +Y+G++ + I+K K+D Sbjct: 629 DTLRVHVYTVQHSAYDNAVLVAGITVTTLAYIGILAAKSIITKALKQD 676
>Q92542:NICA_HUMAN Nicastrin precursor - Homo sapiens (Human)| Length = 709 Score = 117 bits (294), Expect = 2e-25 Identities = 111/428 (25%), Positives = 186/428 (43%), Gaps = 42/428 (9%) Frame = +3 Query: 216 PCVRLLNLSGEIGCSNP--GHGLVIAPIVRFKNSNDQLAE----PSAVLLPL-----DQM 362 PCVRLLN + +IGC + G VI + + ++ L + P VLL D M Sbjct: 49 PCVRLLNATHQIGCQSSISGDTGVIHVVEKEEDLQWVLTDGPNPPYMVLLESKHFTRDLM 108 Query: 363 PAFFLRVSNDPELYHKVAGVLVE-SNGDKLLELSPDRKFPQGDFAPYSN-----VSH--- 515 R S ++AG+ V + SP + P F YSN +H Sbjct: 109 EKLKGRTS-------RIAGLAVSLTKPSPASGFSPSVQCPNDGFGVYSNSYGPEFAHCRE 161 Query: 516 -DWNPAGSGIMWNRYDFPAFLLSEES-TQTLRKIADKNEKSNNGYQANVAEFDLVMQTTK 689 WN G+G+ + + FP FLL +E+ T+ +++ + S NG + F L Sbjct: 162 IQWNSLGNGLAYEDFSFPIFLLEDENETKVIKQCYQDHNLSQNG---SAPTFPLCAMQLF 218 Query: 690 AETHG---SEACLKEQS------------CLPLGGQSVWASLPPMSNASKEHQKPIIMVV 824 + H + C++ S C PL +VW+ L P++ ++V Sbjct: 219 SHMHAVISTATCMRRSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKPDDRVVVA 278 Query: 825 ASQ-DSASFFRDRSLGADSPISGLIALLTAVDALSHLHDLGKLKKQLVFAAFDGEAWGYL 1001 A++ DS SFF + + GA+S ++ + L A +AL D+ L + ++F F GE + Y+ Sbjct: 279 ATRLDSRSFFWNVAPGAESAVASFVTQLAAAEALQKAPDVTTLPRNVMFVFFQGETFDYI 338 Query: 1002 GSRKFLQELDEGDDSVNGINSSMIEQVLEIGSVGKGISQGDTLFYAH----ASRNSSISK 1169 GS + + ++++G V N ++ +E+G V S + H + +N S+ Sbjct: 339 GSSRMVYDMEKGKFPVQLEN---VDSFVELGQVALRTS---LELWMHTDPVSQKNESVRN 392 Query: 1170 KIXXXXXXXXXXXXXXNVKVKPAASSNPGVPPSSLMSFMRKNTSTSGVVLEDFDSQFSNK 1349 ++ + + + +PPSSL F+R + SGVVL D F NK Sbjct: 393 QVEDLLATLEKSGAGVPAVILRRPNQSQPLPPSSLQRFLRAR-NISGVVLADHSGAFHNK 451 Query: 1350 FYHSHLDS 1373 +Y S D+ Sbjct: 452 YYQSIYDT 459
>P57716:NICA_MOUSE Nicastrin precursor - Mus musculus (Mouse)| Length = 708 Score = 114 bits (286), Expect = 1e-24 Identities = 106/421 (25%), Positives = 184/421 (43%), Gaps = 35/421 (8%) Frame = +3 Query: 216 PCVRLLNLSGEIGCSNP--GHGLVIAPIVRFKNSNDQLAE-PSAVLLPLDQMPAFFLRVS 386 PCVRLLN + +IGC + G VI + + ++ L + P+ + L + F V Sbjct: 48 PCVRLLNATHQIGCQSSISGDTGVIHVVEKEEDLKWVLTDGPNPPYMVLLEGKLFTRDVM 107 Query: 387 NDPE-LYHKVAGVLVE-SNGDKLLELSPDRKFPQGDFAPYSN-----VSHD----WNPAG 533 + ++AG+ V + + SP + P F YSN +H WN G Sbjct: 108 EKLKGTTSRIAGLAVTLAKPNSTSSFSPSVQCPNDGFGIYSNSYGPEFAHCKKTLWNELG 167 Query: 534 SGIMWNRYDFPAFLLSEES-TQTLRKIADKNEKSNNGYQANVAEFDLVMQTTKAETHG-- 704 +G+ + + FP FLL +E+ T+ +++ + NG + F L + H Sbjct: 168 NGLAYEDFSFPIFLLEDENETKVIKQCYQDHNLGQNG---SAPSFPLCAMQLFSHMHAVI 224 Query: 705 -SEACLK------------EQSCLPLGGQSVWASLPPMSNA-SKEHQKPIIMVVASQDSA 842 + C++ E C PL +VW+ L P++ + E +++ DS Sbjct: 225 STATCMRRSFIQSTFSINPEIVCDPLSDYNVWSMLKPINTSVGLEPDVRVVVAATRLDSR 284 Query: 843 SFFRDRSLGADSPISGLIALLTAVDALSHLHDLGKLKKQLVFAAFDGEAWGYLGSRKFLQ 1022 SFF + + GA+S ++ + L A +AL D+ L + ++F F GE + Y+GS + + Sbjct: 285 SFFWNVAPGAESAVASFVTQLAAAEALHKAPDVTTLSRNVMFVFFQGETFDYIGSSRMVY 344 Query: 1023 ELDEGDDSVNGINSSMIEQVLEIGSVGKGISQGDTLFYAH----ASRNSSISKKIXXXXX 1190 +++ G V N I+ +E+G V S + H + +N S+ ++ Sbjct: 345 DMENGKFPVRLEN---IDSFVELGQVALRTSLD---LWMHTDPMSQKNESVKNQVEDLLA 398 Query: 1191 XXXXXXXXXNVKVKPAASSNPGVPPSSLMSFMRKNTSTSGVVLEDFDSQFSNKFYHSHLD 1370 V + + +PPSSL F+R + SGVVL D F N++Y S D Sbjct: 399 TLEKSGAGVPEVVLRRLAQSQALPPSSLQRFLRAR-NISGVVLADHSGSFHNRYYQSIYD 457 Query: 1371 S 1373 + Sbjct: 458 T 458
>Q8CGU6:NICA_RAT Nicastrin precursor - Rattus norvegicus (Rat)| Length = 708 Score = 112 bits (281), Expect = 5e-24 Identities = 106/425 (24%), Positives = 179/425 (42%), Gaps = 39/425 (9%) Frame = +3 Query: 216 PCVRLLNLSGEIGCSNPGHGLVIAPIVRFKNSNDQLA--------EPSAVLLPLDQMPAF 371 PCVRLLN + +IGC + G ++ D L P VLL Sbjct: 48 PCVRLLNATHQIGCQSSISG--DTGVIHVVEKEDDLKWVLTDGPNPPYMVLLEGKLFTRD 105 Query: 372 FL-RVSNDPELYHKVAGVLVESNGDKLLELSPDRKFPQGDFAPYSN-----VSHD----W 521 + ++ + +A L + N SP + P F YSN +H W Sbjct: 106 IMEKLKGETSRIAGLAVTLAKPNSTS--SFSPSVQCPNDGFGIYSNSYGPEFAHCKKTLW 163 Query: 522 NPAGSGIMWNRYDFPAFLLSEES-TQTLRKIADKNEKSNNGYQANVAEFDLVMQTTKAET 698 N G+G+ ++ + FP FLL +E+ T+ +++ + NG + F L + Sbjct: 164 NELGNGLAYDDFSFPIFLLEDENETKVIKQCYQDHNLGQNG---SAPSFPLCAMQLFSHM 220 Query: 699 H---GSEACLK------------EQSCLPLGGQSVWASLPPMSNASKEHQKPIIMVVASQ 833 H + C++ E C PL +VW+ L P++ + ++V A++ Sbjct: 221 HAVISTATCMRRSFIQSTFSINPEIVCDPLSDYNVWSMLKPINTSGGLEPDVRVVVAATR 280 Query: 834 -DSASFFRDRSLGADSPISGLIALLTAVDALSHLHDLGKLKKQLVFAAFDGEAWGYLGSR 1010 DS SFF + + GA+S ++ + L A +AL D+ L + ++F F GE + Y+GS Sbjct: 281 LDSRSFFWNVAPGAESAVASFVTQLAAAEALHKAPDVTTLPRNVMFVFFQGETFDYIGSS 340 Query: 1011 KFLQELDEGDDSVNGINSSMIEQVLEIGSVGKGISQGDTLFYAH----ASRNSSISKKIX 1178 + + +++ G V N I+ +E+G V S + H + +N S+ ++ Sbjct: 341 RMVYDMENGKFPVRLEN---IDSFVELGQVALRTS---LELWMHTDPMSQKNESVKNQVE 394 Query: 1179 XXXXXXXXXXXXXNVKVKPAASSNPGVPPSSLMSFMRKNTSTSGVVLEDFDSQFSNKFYH 1358 V + +PPSSL F+R + SGVVL D F N++Y Sbjct: 395 DLLVTLEQSGADTPQVVLSRLVQSQALPPSSLQRFLRAR-NISGVVLADHSGSFHNRYYQ 453 Query: 1359 SHLDS 1373 S D+ Sbjct: 454 SIYDT 458
>Q9VC27:NICA_DROME Nicastrin homolog precursor - Drosophila melanogaster (Fruit fly)| Length = 695 Score = 77.4 bits (189), Expect = 3e-13 Identities = 94/433 (21%), Positives = 193/433 (44%), Gaps = 40/433 (9%) Frame = +3 Query: 192 MYVNIESFPCVRLLNLSGEIGCSNPGHGLV-IAPIVRFKNSNDQL--AEPSAVLLPLDQM 362 MY I C R LN + + GCS+ G V + ++ + + L + PS P+ + Sbjct: 31 MYEPIGGASCFRRLNGTHQTGCSSTYSGSVGVLHLINVEADLEFLLSSPPSPPYAPM--I 88 Query: 363 PAFFLRVSNDPELYH----KVAGVLVESNGDKLLELSPDRKFPQ--------GDFAPYSN 506 P +N L ++ VL+ + +++ + S + P + SN Sbjct: 89 PPHLFTRNNLMRLKEAGPKNISVVLLINRTNQMKQFSHELNCPNQYSGLNSTSETCDASN 148 Query: 507 VSHDWNPAGSGIMWNRYDFPAFLLSE-ESTQTLRKIADKNEKSNNGYQANVAEFDLVMQT 683 + +WNP G+G++ + FP + +++ + L K N A + + +++ Sbjct: 149 PAKNWNPWGTGLLHEDFPFPIYYIADLDQVTKLEKCFQDFNNHNYETHALRSLCAVEVKS 208 Query: 684 TKAETHGSEACLKEQS----------CLPLGGQSVWASLPPMSNASKEHQKPI------I 815 + +E C++ + C PL G++V+A+L P A + + + + I Sbjct: 209 FMSAAVNTEVCMRRTNFINNLGGSKYCDPLEGRNVYATLYPRKPAIENNLETVHTNEKFI 268 Query: 816 MVVASQDSASFFRDRSLGADSPISGLIALLTAVDAL--SHLHDLGKLKKQLVFAAFDGEA 989 +V D+ + F LGA + G A+ T V L L K ++F F+GE+ Sbjct: 269 LVTCRLDTTTMFDGVGLGAMDSLMG-FAVFTHVAYLLKQLLPPQSKDLHNVLFVTFNGES 327 Query: 990 WGYLGSRKFLQELDE-----GDDSVNGINSSMIEQVLEIGSVGKGISQGDTLFYAHASRN 1154 + Y+GS++F+ ++++ I I+ +L+IG++ IS HA Sbjct: 328 YDYIGSQRFVYDMEKLQFPTESTGTPPIAFDNIDFMLDIGTL-DDISN----IKLHALNG 382 Query: 1155 SSISKKI-XXXXXXXXXXXXXXNVKVKPAASSNPGVPPSSLMSFMRKNTSTSGVVLEDFD 1331 ++++++I N+ ++ S++ +PP+S SF+R++ + + ++L + Sbjct: 383 TTLAQQILERLNNYAKSPRYGFNLNIQSEMSAH--LPPTSAQSFLRRDPNFNALIL---N 437 Query: 1332 SQFSNKFYHSHLD 1370 ++ +NK+YHS D Sbjct: 438 ARPTNKYYHSIYD 450
>Q23316:NICA_CAEEL Nicastrin precursor - Caenorhabditis elegans| Length = 723 Score = 56.2 bits (134), Expect = 6e-07 Identities = 59/269 (21%), Positives = 112/269 (41%), Gaps = 17/269 (6%) Frame = +3 Query: 813 IMVVASQDSASFFRDRSLGADSPISGLIALLTAVDAL-SHLHDLGKLK----KQLVFAAF 977 +MV A DS + S+G S ++ +I++L A ++ + + K + + FA F Sbjct: 280 MMVTARMDSFGMIPEISVGEVSVLTSIISVLAAARSMGTQIEKWQKASNTSNRNVFFAFF 339 Query: 978 DGEAWGYLGS---------RKFLQELDEGDDSVNGINSSMIEQVLEIGSVGKGISQGDTL 1130 +GE+ Y+GS KF Q + ++ I + ++ +LE+ + G+++G Sbjct: 340 NGESLDYIGSGAAAYQMENGKFPQMIRSDRTHIHPIRPNELDYILEVQQI--GVAKG-RK 396 Query: 1131 FYAH--ASRNSSISKKIXXXXXXXXXXXXXXNVKVKPAASSNPGVPPSSLMSFMRKNTST 1304 +Y H R + ++ + S VPP+S SF + + Sbjct: 397 YYVHVDGERYQQNKTQTDRVIDRIERGLRSHAFDLEKPSGSGDRVPPASWHSFAKADAHV 456 Query: 1305 SGVVLEDFDSQFSNKFYHSHLDSPXXXXXXXXXXXXXLVARSLYILATADMPVDLMTLNT 1484 V+L + ++ + +S LD + A S ILA A V + T Sbjct: 457 QSVLLAPYGKEYEYQRVNSILDKNEWTEDEREKAIQEIEAVSTAILAAAADYVGVETDEV 516 Query: 1485 I-KVNVTLVEELIGCLLTCDPGLSCDIVK 1568 + KV+ L+ + CL+T + CD ++ Sbjct: 517 VAKVDKKLITTIFDCLITSNFWFDCDFMQ 545
>Q969V3:NCLN_HUMAN Nicalin precursor - Homo sapiens (Human)| Length = 563 Score = 41.2 bits (95), Expect = 0.020 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%) Frame = +3 Query: 807 PIIMVVASQDSASFFRDRSLGADSPISGLIALLTAVDALSHLHDLGKLKK--QLVFAAFD 980 P I++VA D+ SLGADS SG+ LL S L+ + L+F A Sbjct: 217 PTIVIVAHYDAFGVAPWLSLGADSNGSGVSVLLELARLFSRLYTYKRTHAAYNLLFFASG 276 Query: 981 GEAWGYLGSRKFLQE-LDEGDDSVNGINSSMIEQVLEIGSVGKGIS 1115 G + Y G++++L++ LD D S+ N + VL + +VG+G S Sbjct: 277 GGKFNYQGTKRWLEDNLDHTDSSLLQDN---VAFVLCLDTVGRGSS 319
>Q5XIA1:NCLN_RAT Nicalin precursor - Rattus norvegicus (Rat)| Length = 563 Score = 40.8 bits (94), Expect = 0.026 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 3/104 (2%) Frame = +3 Query: 807 PIIMVVASQDSASFFRDRSLGADSPISGLIALLTAVDALSHLHDLGKLKK--QLVFAAFD 980 P I++VA D+ SLGADS SG+ LL S L+ + L+F A Sbjct: 217 PTIVIVAHYDAFGVAPWLSLGADSNGSGISVLLELARLFSRLYTYKRTHAAYNLLFFASG 276 Query: 981 GEAWGYLGSRKFLQE-LDEGDDSVNGINSSMIEQVLEIGSVGKG 1109 G + Y G++++L++ LD D S+ N + VL + +VG+G Sbjct: 277 GGKFNYQGTKRWLEDSLDHTDSSLLQDN---VAFVLCLDTVGRG 317
>Q8VCM8:NCLN_MOUSE Nicalin precursor - Mus musculus (Mouse)| Length = 563 Score = 40.8 bits (94), Expect = 0.026 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 3/104 (2%) Frame = +3 Query: 807 PIIMVVASQDSASFFRDRSLGADSPISGLIALLTAVDALSHLHDLGKLKK--QLVFAAFD 980 P I++VA D+ SLGADS SG+ LL S L+ + L+F A Sbjct: 217 PTIVIVAHYDAFGVAPWLSLGADSNGSGISVLLELARLFSRLYTYKRTHAAYNLLFFASG 276 Query: 981 GEAWGYLGSRKFLQE-LDEGDDSVNGINSSMIEQVLEIGSVGKG 1109 G + Y G++++L++ LD D S+ N + VL + +VG+G Sbjct: 277 GGKFNYQGTKRWLEDSLDHTDSSLLQDN---VAFVLCLDTVGRG 317
>Q54735:CYNT_SYNY3 Carbonic anhydrase - Synechocystis sp. (strain PCC 6803)| Length = 274 Score = 33.9 bits (76), Expect = 3.2 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +2 Query: 1796 VCCIDNQVCPCLFDQAEVRGQCLARSSGKLFGPYG 1900 +CC D++V P L Q+EV + R++G + PYG Sbjct: 37 ICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPYG 71
>Q9JVP8:NQRA_NEIMA Na(+)-translocating NADH-quinone reductase subunit A - Neisseria| meningitidis serogroup A Length = 447 Score = 33.1 bits (74), Expect = 5.5 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = +3 Query: 1890 DPMGAADPIWTESYWNTIGL-RVYAVQSTTSDRLILLAGLAVTAASYLGVVVG 2045 +P+GA +WT +Y + I + R++A ++R+I L G V L V+G Sbjct: 229 EPVGANKTVWTINYQDVIAIGRLFATGRLNTERVIALGGSQVNKPRLLRTVLG 281
>Q1Q883:MURD_PSYCK UDP-N-acetylmuramoylalanine--D-glutamate ligase - Psychrobacter| cryohalolentis (strain K5) Length = 471 Score = 33.1 bits (74), Expect = 5.5 Identities = 56/235 (23%), Positives = 84/235 (35%), Gaps = 11/235 (4%) Frame = +3 Query: 447 LLELSPDRKFPQGDFAPYSNVSHDWNPAGSGIMWNRYDFPAFLLSEESTQTLRKIADKNE 626 +L +SPD GD Y H ++ NR D L +S L Sbjct: 188 VLNMSPDHLDRHGDMLGYHQAKHRIFQGAKSVVINREDALTRPLVSDSLPRLSTGIHAPN 247 Query: 627 KSNNGYQANVA-------EFDLVMQTTKAETHGSEACLKEQSCLPLG---GQSVWASLPP 776 K + G + A + ++ K + G L Q+ L LG G + L Sbjct: 248 KGHYGLITDTAGQTYLARGTERLISADKLKIKGRHNLLNAQAALALGELAGLPLEIMLIT 307 Query: 777 MSN-ASKEHQKPIIMVVASQDSASFFRDRSLGADSPISGLIALLTAVDALSHLHDLGKLK 953 + A EH+ + VA D +F DS + + + + AV+ L Sbjct: 308 LQQFAGLEHRCQYVSTVAGID---YFN------DSKGTNIGSTMAAVEGLG--------- 349 Query: 954 KQLVFAAFDGEAWGYLGSRKFLQELDEGDDSVNGINSSMIEQVLEIGSVGKGISQ 1118 V+A DG+ LG + Q+ E +N + QVL IG GK I Q Sbjct: 350 --AVYAPKDGKLLLILGGQGKGQQFGELSPFIN----QYVSQVLFIGEDGKQIEQ 398
>Q6E2N3:TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 1163 Score = 32.3 bits (72), Expect = 9.3 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%) Frame = -3 Query: 1053 HSQNHHLHPVLVRIFCYQDNPMLHHQKQQTQAVS*VCLDHEGEKEHQQQ*AKQSILIWE- 877 H Q H H +Q Q+QQ Q + +++HQQQ +Q + + Sbjct: 533 HQQQHQHHQQQQHQHQHQQQQQQQQQQQQQQQ------QQQQQQQHQQQIQQQMRIASQM 586 Query: 876 NQHPNYGP*RMMQNPGMQQPLLLVSDAL 793 +QHP G +M+Q P P L+ AL Sbjct: 587 SQHPRQGAPQMIQQP---PPRLISMQAL 611
>Q9K0M3:NQRA_NEIMB Na(+)-translocating NADH-quinone reductase subunit A - Neisseria| meningitidis serogroup B Length = 447 Score = 32.3 bits (72), Expect = 9.3 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = +3 Query: 1890 DPMGAADPIWTESYWNTIGL-RVYAVQSTTSDRLILLAGLAVTAASYLGVVVG 2045 +P+GA +WT +Y + I + R++A ++R+I L G V L V+G Sbjct: 229 EPVGANKTVWTINYQDVITIGRLFATGRLNTERVIALGGSQVNKPRLLRTVLG 281
>Q63120:MRP2_RAT Canalicular multispecific organic anion transporter 1 - Rattus| norvegicus (Rat) Length = 1541 Score = 32.3 bits (72), Expect = 9.3 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 6/61 (9%) Frame = +3 Query: 996 YLGSRKFLQELDEGDDSVNGINSSMIEQVLEIGSVGK-GISQG-----DTLFYAHASRNS 1157 ++GS +L D++NG N+S + + IG G G++QG TL+ +A RN+ Sbjct: 989 FIGSNLWLSAWTSDSDNLNGTNNSSSHRDMRIGVFGALGLAQGICLLISTLWSIYACRNA 1048 Query: 1158 S 1160 S Sbjct: 1049 S 1049 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 425,520,818 Number of extensions: 9659320 Number of successful extensions: 25314 Number of sequences better than 10.0: 15 Number of HSP's gapped: 25278 Number of HSP's successfully gapped: 15 Length of query: 799 Length of database: 100,686,439 Length adjustment: 121 Effective length of query: 678 Effective length of database: 67,496,744 Effective search space: 45762792432 Effective search space used: 45762792432 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)