>Q7TQI8:TSYL2_MOUSE Testis-specific Y-encoded-like protein 2 - Mus musculus (Mouse)|
          Length = 677
 Score = 32.0 bits (71), Expect = 3.3
 Identities = 19/43 (44%), Positives = 23/43 (53%)
 Frame = +1

Query: 28  LRPPCSPPTTRLPLEPASEPIPQPHNLTTATRDALARIRGTSP 156
           L PP  PP  RLPL P  +  P+P   T A +  LA +RG  P
Sbjct: 25  LPPPPPPPLQRLPLPPPQQR-PRPQEETEAAQ-VLADMRGVGP 65

>Q3S2X5:CGHB_SAIBB Choriogonadotropin subunit beta precursor - Saimiri boliviensis|
           boliviensis (Bolivian squirrel monkey)
          Length = 163

 Score = 31.2 bits (69), Expect = 5.6
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 22  QPLRPPCSPPTTRLPLEPASEPIPQPHNLTTATR--DALARIRGTSP 156
           +PLRPPC P    L +E    P+  P N T       ++ R+  T P
Sbjct: 23  EPLRPPCRPTNVILAVEKEGCPVCVPFNTTICAGYCSSMVRVMQTLP 69

>Q81487:POLG_HCVTR Genome polyprotein [Contains: Core protein p21 - Hepatitis C virus|
            genotype 3b (isolate Tr-Kj) (HCV)
          Length = 3023

 Score = 30.8 bits (68), Expect = 7.4
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +1

Query: 37   PCSPPTTRLPLEPASEPIPQPHNL--TTATRDALAR 138
            PCS    +LP+ P S  + + HNL  +T++R A AR
Sbjct: 2445 PCSAEEEKLPISPLSNSLLRHHNLVYSTSSRSAAAR 2480

>O29043:Y1225_ARCFU Uncharacterized protein AF_1225 precursor - Archaeoglobus fulgidus|
          Length = 212

 Score = 30.4 bits (67), Expect = 9.6
 Identities = 23/77 (29%), Positives = 37/77 (48%)
 Frame = +1

Query: 271 VSSEDVESIKQAQHLILGRLQDSNAVLTHFNEYSEQCFAEVSTDLASKARLLKSMKDDLD 450
           +S E +E++K      L  LQ+   +L   NE  +Q   E+   L      L+  K DLD
Sbjct: 116 ISQEQIETLKSQ----LEDLQNKAKMLGIQNELQKQQIEELQKKLERAKTELQKKKSDLD 171

Query: 451 HIFMKLRSMKSRLASTY 501
            +  K+R + +R +S Y
Sbjct: 172 ELEEKIREL-NRQSSIY 187

>Q9JIL8:RAD50_RAT DNA repair protein RAD50 - Rattus norvegicus (Rat)|
          Length = 1312

 Score = 30.4 bits (67), Expect = 9.6
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 13/80 (16%)
 Frame = +1

Query: 280  EDVESIKQAQHLILGRLQDSNAVLTHF-------------NEYSEQCFAEVSTDLASKAR 420
            E++++IK+   L LGR +     + HF              +Y E      +T+L +K  
Sbjct: 1062 ENIDTIKRNHSLALGRQKGYEEEILHFKKELREPQFRDAEEKYREMMIVMRTTELVNKD- 1120

Query: 421  LLKSMKDDLDHIFMKLRSMK 480
             L      LDH  MK  SMK
Sbjct: 1121 -LDIYYKTLDHAIMKFHSMK 1139

>P45970:LIN5_CAEEL Spindle apparatus protein lin-5 - Caenorhabditis elegans|
          Length = 821

 Score = 30.4 bits (67), Expect = 9.6
 Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
 Frame = +1

Query: 256 QFRSLVSSEDVESIKQAQHLILGRLQDSNAVLTHFNEYSEQC-------FAEVSTDLASK 414
           QFR+   S D+E+ K   H IL +L +S   L       E+         A++ T     
Sbjct: 272 QFRAEELSCDLEAKKDEVHNILQQLNESRMTLRSEQRSLEEADIKKENLTAKLKTVTEDN 331

Query: 415 ARLLK---SMKDDLDHIFMKLRSMKSRLASTYPDAFPDGAVAETMDQRPDLETPL 570
            +L+K    ++D  D+ F + R  +  L  T         +  T DQ  DL+  L
Sbjct: 332 GKLMKQARELRDLNDYEFARFRQQEQELTET---------LRATQDQMADLQEQL 377


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 130,328,959
Number of extensions: 2501796
Number of successful extensions: 9790
Number of sequences better than 10.0: 6
Number of HSP's gapped: 9722
Number of HSP's successfully gapped: 6
Length of query: 289
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 177
Effective length of database: 69,965,399
Effective search space: 12383875623
Effective search space used: 12383875623
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)