>Q5Y5T5:ZDHC8_MOUSE Probable palmitoyltransferase ZDHHC8 - Mus musculus (Mouse)|
          Length = 762
 Score = 35.0 bits (79), Expect = 0.40
 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
 Frame = +2

Query: 383 GAKSPCRQGMTGTRQDTTSKIIKTSASLPCRKDDQGHANLMGV--------------MNS 520
           GA++P  Q    +   + S+  +TS+S    + DQ + N  G               + S
Sbjct: 615 GARNPALQTSLSSLSSSMSRAPRTSSS--SLQADQANNNAPGPRPGSGSHRSPARQGLPS 672

Query: 521 PSTKPRQASFVGMTTKALGKLPCRAEDPRPRQAPCRDDGAGHWRATPPPQVSAQRPGVET 700
           P   PR  S+ G  +KA+  +     D +P  A  RD        TPP +++ Q PG+  
Sbjct: 673 PPGTPRSPSYTG--SKAVAFIHTDLPDRQPSLAMQRDHPQ---LKTPPSKLNGQSPGMAR 727

Query: 701 PGYVSSP 721
            G  +SP
Sbjct: 728 LGPAASP 734

>Q70EK9:UBP51_HUMAN Ubiquitin carboxyl-terminal hydrolase 51 - Homo sapiens (Human)|
          Length = 711

 Score = 32.7 bits (73), Expect = 2.0
 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
 Frame = +1

Query: 382 GREEPLPAGHDRNQTRYNLQDYQDLGKSALPER*PRPRQ-----FDGRDELTKYKTSTSL 546
           G+ E   AG  +  +R   ++ +++    L ER P P +       G DE  K   S  L
Sbjct: 35  GKMEEAAAGATKASSR---REAEEMKLEPLQEREPAPEENLTWSSSGGDE--KVLPSIPL 89

Query: 547 LCRDDDQS--PRQAPLPGRRPKAPTSSLPR*RGWALEGNPPPPS 672
            C        PR+ P P  +P+A + S P      L   PPPP+
Sbjct: 90  RCHSSSSPVCPRRKPRPRPQPRARSRSQP-----GLSAPPPPPA 128

>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)|
          Length = 2752

 Score = 32.7 bits (73), Expect = 2.0
 Identities = 43/182 (23%), Positives = 70/182 (38%), Gaps = 20/182 (10%)
 Frame = +2

Query: 236  RKRQGDGTRLLHEDLSTTVLRMLQ-PRT-IKGTTSLQRCYKAGP*CPNLCTGAKSPCRQG 409
            R R      +    +S+   R L  PR+  K   SL+R       CP     +++P R+ 
Sbjct: 740  RSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPK--QKSQTPPRRS 797

Query: 410  MTGTRQD-----TTSKIIKTSASLPCRKDDQGHANLMGVMNSP------STKPRQASFVG 556
             +G+ Q      T  +  ++S+S P ++  +  +      +SP       T PRQ S   
Sbjct: 798  RSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITS 857

Query: 557  MTTKALGKLP----CRAEDPRPR---QAPCRDDGAGHWRATPPPQVSAQRPGVETPGYVS 715
                     P    C    P P    + P R   +G    + PP+V +  P  ++P   S
Sbjct: 858  PQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSG----SSPPRVKSSTPPRQSPSRSS 913

Query: 716  SP 721
            SP
Sbjct: 914  SP 915

>Q9UEW3:MARCO_HUMAN Macrophage receptor MARCO - Homo sapiens (Human)|
          Length = 520

 Score = 32.7 bits (73), Expect = 2.0
 Identities = 50/191 (26%), Positives = 65/191 (34%), Gaps = 11/191 (5%)
 Frame = +2

Query: 182 GHKSYIRYAGATTDKGRSRKRQGDGTRLLHEDLSTTVLRMLQPRTIKGTTSLQRCYKAGP 361
           GHK  +   GA    G   ++   G   +  D +T       P  +KG   LQ     G 
Sbjct: 157 GHKGAMGMPGAPGPPGPPAEKGAKGA--MGRDGATGPSGPQGPPGVKGEAGLQG--PQGA 212

Query: 362 *CPNLCTGAKSPCRQ-------GMTGTRQDTTSKIIKTSASLPCRKDDQGHANLMGVMNS 520
                 TG   P  +       G+ G + +T +K  K    LP  K D+G     GVM  
Sbjct: 213 PGKQGATGTPGPQGEKGSKGDGGLIGPKGETGTKGEKGDLGLPGSKGDRGMKGDAGVMGP 272

Query: 521 PSTKPRQASFVGMTTKALGKLPCRAED---PRPRQAPCRDDGAGHWRATPPPQVSAQRPG 691
           P  +  +  F       L   P    D   P  +  P      GH  A   P  SA  PG
Sbjct: 273 PGAQGSKGDFGRPGPPGLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAKGEPG-SAGSPG 331

Query: 692 -VETPGYVSSP 721
               PG   SP
Sbjct: 332 RAGLPGSPGSP 342

>P97881:MUC13_RAT Mucin-13 precursor - Rattus norvegicus (Rat)|
          Length = 547

 Score = 32.0 bits (71), Expect = 3.4
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
 Frame = +2

Query: 419 TRQDTTSKIIKTSASLPCRKDDQ--GHANLMGVMNSPSTKPRQASFVGMTTKALGKLPCR 592
           T+  +T+    T+A+ P     Q  G   L G  ++P+T   Q +     T    +LP  
Sbjct: 56  TQLPSTTSTPTTTATQPTXTSTQTPGTTQLPGTTSTPTTTATQPTSTSFQTPGTTQLPSS 115

Query: 593 AEDPRPRQAPCRDDGAGHWRATPPPQVSAQRPG-VETPGYVSSP 721
              P                AT P   ++Q PG  + PG  SSP
Sbjct: 116 TSTPTT-------------TATQPTSTASQTPGTTQPPGGASSP 146

>P37370:VRP1_YEAST Verprolin - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 817

 Score = 31.6 bits (70), Expect = 4.4
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +1

Query: 535 STSLLCRDDDQSPRQAPLPGRRPKAPTSSLPR*RGWALEGNPPPPS 672
           S++ +  ++ +SP Q PLP   P  PTS  P     A    PPPPS
Sbjct: 293 SSTKIQTENHKSPSQPPLPSSAPPIPTSHAPPLPPTA----PPPPS 334

>Q9JKS6:PCLO_RAT Protein piccolo - Rattus norvegicus (Rat)|
          Length = 5085

 Score = 31.6 bits (70), Expect = 4.4
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +2

Query: 518 SPSTKPRQASFVGM-TTKALGKLPCRAEDPRPRQAPCRDDGAGHWRATPPPQVSAQRPGV 694
           SP+  P Q +  G    +  G      + P P ++P +  G G   A PP +   Q+ G+
Sbjct: 257 SPAQTPAQQASPGKPVAQQPGSAKATVQQPGPAKSPAQPAGTGKSPAQPPAKTPGQQAGL 316

Query: 695 ETPGYVSSP 721
           E       P
Sbjct: 317 EKTSSSQQP 325

>Q72BQ8:ISPE_DESVH 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase - Desulfovibrio|
           vulgaris (strain Hildenborough / ATCC 29579 / NCIMB
           8303)
          Length = 286

 Score = 31.2 bits (69), Expect = 5.7
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 642 PAPSSRQGACRGLGSSARQGS-LPRALVVIPTKEACRGFVLGEFITPIKLAWPWSSF 475
           P P  R+  CR    +AR G+ +P  +  +P    CR   +GE ITP+  AWP+  F
Sbjct: 120 PHPLGRETLCR---LAARIGADVPFFIHAVP----CRASGIGEIITPV--AWPYKGF 167

>Q9ULC8:ZDHC8_HUMAN Probable palmitoyltransferase ZDHHC8 - Homo sapiens (Human)|
          Length = 765

 Score = 30.8 bits (68), Expect = 7.5
 Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 14/127 (11%)
 Frame = +2

Query: 383 GAKSPCRQGMTGTRQDTTSKIIKTSASLPCRKDDQGHANLMGV--------------MNS 520
           GA++P  Q    +   + S+  +TS+S    + DQ  +N  G               + S
Sbjct: 618 GARNPALQTSLSSLSSSVSRAPRTSSS--SLQADQASSNAPGPRPSSGSHRSPARQGLPS 675

Query: 521 PSTKPRQASFVGMTTKALGKLPCRAEDPRPRQAPCRDDGAGHWRATPPPQVSAQRPGVET 700
           P   P   S+ G   KA+  +     +P P     RD        TPP +++ Q PG+  
Sbjct: 676 PPGTPHSPSYAG--PKAVAFIHTDLPEPPPSLTVQRDHPQ---LKTPPSKLNGQSPGLAR 730

Query: 701 PGYVSSP 721
            G  + P
Sbjct: 731 LGPATGP 737

>P03181:YHL1_EBV Hypothetical protein BHLF1 - Epstein-Barr virus (strain B95-8)|
           (HHV-4) (Human herpesvirus 4)
          Length = 660

 Score = 30.4 bits (67), Expect = 9.8
 Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 11/118 (9%)
 Frame = +2

Query: 401 RQGMTGTRQDTTSKIIKTSASLPCRKDDQGHANLMGVMNSPSTKP--RQASF-VGMTTKA 571
           R G    R  T +   ++  + P  + D  H+N  G  + P   P  RQA + +G  +  
Sbjct: 73  RVGAGRGRPGTPAPSRQSRRTGPAEQADHAHSNPTGGCSDPQRSPRTRQAGYALGEGSAG 132

Query: 572 LGKLPCRAEDPRPRQAPCRDDG--------AGHWRATPPPQVSAQRPGVETPGYVSSP 721
           LG    R       Q   R+ G        +G  R  PPP  + QRP   T G  ++P
Sbjct: 133 LGSRGPRPHPAFQVQWSARNPGCPRTWRRRSGAQRGHPPPG-AGQRPSGPTGGRPAAP 189

>Q80XQ2:TBCD5_MOUSE TBC1 domain family member 5 - Mus musculus (Mouse)|
          Length = 815

 Score = 30.4 bits (67), Expect = 9.8
 Identities = 32/103 (31%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
 Frame = +1

Query: 472 PER*PRPRQFDGRDELTKYKTSTSLLCRDDDQSPRQAPLP-----------GRRPKAPTS 618
           P+R PRP  +     L  YK   + L      + R APL            GR+  +P S
Sbjct: 414 PKRNPRPATYQFHPNLDYYKARGADLMNKSRTNARGAPLNIHKVSNSLINFGRKLISPAS 473

Query: 619 SLPR*RGWALEGNPPPPSFSAASRCRNTWIRIFTSTSLTRTRH 747
           + P   G  + GN    SFSAA         I T TS    RH
Sbjct: 474 A-PGSMGGPVPGNNSSSSFSAA---------IPTRTSTEAPRH 506

>P19503:ENV_SIVSP Envelope glycoprotein gp160 precursor - Simian immunodeficiency|
           virus (isolate PBj14/BCL-3) (SIV-sm) (Simian
           immunodeficiency virus sooty mangabey monkey)
          Length = 889

 Score = 30.4 bits (67), Expect = 9.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 329 TSLQRCYKAGP*CPNLCTGAKSPCRQGMTGTRQDTTSKIIKTSAS 463
           TS++ C K  P C  +        R G+TGT   TT++   T AS
Sbjct: 96  TSIKPCVKLTPLCITMRCNKSETDRWGLTGTPAPTTTQTTTTQAS 140


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 162,765,603
Number of extensions: 3865025
Number of successful extensions: 11014
Number of sequences better than 10.0: 12
Number of HSP's gapped: 10987
Number of HSP's successfully gapped: 12
Length of query: 292
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 180
Effective length of database: 69,965,399
Effective search space: 12593771820
Effective search space used: 12593771820
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)