ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf16k19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001058513.1| Oryza sativa (japonica cultivar-group) Os03g0861100 (Os03g0861100) mRNA, complete cds Length = 4300 Score = 303 bits (153), Expect = 2e-78 Identities = 267/305 (87%) Strand = Plus / Plus Query: 832 gaggagcattcaaaagttcaacttctcagagtgctggagactcgcaagactgtcttacgt 891 |||||| |||||||||||||| | || ||||| |||||||||||||| | |||||||||| Sbjct: 771 gaggagaattcaaaagttcaattacttagagttctggagactcgcaaaattgtcttacgt 830 Query: 892 aaagagcaggctatggcctttgcccgtgctgtagctgctggttttgatatagacaacctg 951 || |||||||||||||||||||| ||||||||||| ||||| ||| |||| ||||||||| Sbjct: 831 aaggagcaggctatggcctttgcgcgtgctgtagcggctgggtttaatattgacaacctg 890 Query: 952 ctatatttgatatcgttcgcagagcgttttggtgcttcacgcttgatgaaggcgtgtaca 1011 || |||||| | |||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 891 ggatttttgatcacattcgcagaccgttttggtgcttcacgcttgatgaaggcatgcaca 950 Query: 1012 cagttcattgatttgtggaggcaaaaacatgaaactggacagtggattgacgttgaacct 1071 ||||||| ||| |||||||| ||| ||||||||||| || |||||||| |||||||| Sbjct: 951 cagttcactgagttgtggagaagaaagcatgaaactggccaatggattgaagttgaaccg 1010 Query: 1072 gaagcaatgtctgcacgctctgaatttcctcccttcaatgctgctggcattatgttaatg 1131 || |||||||||||||| ||||||||||||||||| |||||| |||| |||||||| ||| Sbjct: 1011 gaggcaatgtctgcacggtctgaatttcctccctttaatgcttctggaattatgtttatg 1070 Query: 1132 ggaga 1136 ||||| Sbjct: 1071 ggaga 1075 Score = 262 bits (132), Expect = 7e-66 Identities = 476/590 (80%), Gaps = 3/590 (0%) Strand = Plus / Plus Query: 1976 cagccaatgggagaattagggccaggcagatgatgtctggtgatgagcttatgatgtctg 2035 ||||| ||||||| |||||| ||||| | ||| |||||||||| || ||| |||| || | Sbjct: 1915 cagcccatgggaggattaggtccaggaaaatgctgtctggtgacgaacttgtgatctcgg 1974 Query: 2036 gggaaggtcggagttttgtgggtggtgacatgaaggagatagaagctggaggtggaggat 2095 |||||| |||||||||||| ||| || || |||||||||||||||||||||||||||| Sbjct: 1975 ctgaaggtaggagttttgtggatggcgatattaaggagatagaagctggaggtggaggat 2034 Query: 2096 acaggagaggttcgaatgatgacttcatggtttatggacatgacaactcaatggacaggg 2155 |||||||||| | | ||| |||||||| |||||||| || || || |||||||||| | Sbjct: 2035 acaggagaggagcaagtgaagacttcatcgtttatggtcaggaaaagccaatggacagtg 2094 Query: 2156 ggagctctttggaccccctcgccgaggcacattacaaaagacccactctggaggaaaaga 2215 |||| | |||||| || || || |||| ||| ||||| || || || ||| |||||||| Sbjct: 2095 ggagttatttggatcctcttgcagagggacagtacaagagtccaaccctgatggaaaaga 2154 Query: 2216 agaatgtgcacactatgagcgacgagtctttcatgatacgtgttagctccaactcacaca 2275 | | |||| | | || || ||||| || ||||||| |||||| || |||||||| Sbjct: 2155 aca---tgcatagtgtggctgatgagtcctttatgatacctgttaggtctaactcacagg 2211 Query: 2276 ataatcttggagcagacggccgtactgcgattgacatagatgccgagcttggctcaagtg 2335 ||||||||||| |||| || |||| || ||||| ||||||| |||||| || || Sbjct: 2212 ataatcttggaccagaaagctgtaccgccattgatatagatgttgagcttcctggaactg 2271 Query: 2336 ttcagaaaacatcagatgccaaggctggaggtcaacttttctatgagccagatgagttga 2395 || |||| ||| ||||||| |||||||||| ||||||||||||||||| |||||||||| Sbjct: 2272 ttaagaagacaacagatgcaaaggctggagaccaacttttctatgagcccgatgagttga 2331 Query: 2396 ttccagagcgtggatttgaagatgtgtcatttggatatgacccatcaatggactatgata 2455 | |||||||||| || ||||||||| ||| ||||||||| ||| ||||||||||||||| Sbjct: 2332 tgccagagcgtgaatatgaagatgtcacatatggatatgatccagcaatggactatgata 2391 Query: 2456 gccacatgcagattcaacatgacgtcagtattgaagatgcaaatgcagaggatttatctg 2515 |||| ||||||||||||| || | ||| |||||||||||||||| || ||| |||| Sbjct: 2392 gccagatgcagattcaacctgccatcatggttgaagatgcaaatgcggatgatgtatcac 2451 Query: 2516 tttgcgtcgagagtgaagaaaagacgcctgggaaagataagaagcttaga 2565 | | || ||| |||||| ||||| || | ||||||||||||||||||| Sbjct: 2452 tgggggttgagggtgaagtaaagaagctagagaaagataagaagcttaga 2501 Score = 188 bits (95), Expect = 9e-44 Identities = 163/185 (88%), Gaps = 3/185 (1%) Strand = Plus / Plus Query: 1233 tggtccatatcaatcaggatatccaccatgggcaatgcatccgccttaccccatgcaagg 1292 ||||||||||||||||| |||||||||||||||||| ||||| || || ||||||||||| Sbjct: 1196 tggtccatatcaatcagcatatccaccatgggcaattcatccaccatatcccatgcaagg 1255 Query: 1293 catgccaccatactaccctggggcaaacccatattaccctcctccctaccccccaacaga 1352 |||||| ||||||||||||| |||||||| |||||||| ||||||||||||| || Sbjct: 1256 catgcct---tactaccctggggtgaacccatactaccctccaccctaccccccaatgga 1312 Query: 1353 tgatcccaggtacaaccactcagaaaggagaccatcaaggaagaactcatcagatagcaa 1412 |||||| |||||| |||||||||| |||||| |||||||||| |||| ||||||||||| Sbjct: 1313 tgatcctaggtaccaccactcagagaggagagtatcaaggaagcactcgtcagatagcaa 1372 Query: 1413 ggact 1417 ||||| Sbjct: 1373 ggact 1377 Score = 165 bits (83), Expect = 1e-36 Identities = 128/143 (89%) Strand = Plus / Plus Query: 2638 ctaactgatgcacagaaacgtgcgcaaaacctacgggcgtacaaagcgggccttcaaaag 2697 ||||| ||||||||||||||||| |||||||| ||||| || ||||| | |||||||||| Sbjct: 2568 ctaacagatgcacagaaacgtgcacaaaacctgcgggcatataaagcagaccttcaaaag 2627 Query: 2698 gaaaagaaagagctggaagcggagcagatgaaacggctcgaaaggcttaagcaagagagg 2757 | ||||||||||| ||||| ||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 2628 gcaaagaaagagcaggaagaggaacagattaaacggctggaaaggcttaagcaagagagg 2687 Query: 2758 caaaagagaattgctgcaagaag 2780 || ||||| |||||||||||||| Sbjct: 2688 cagaagaggattgctgcaagaag 2710 Score = 103 bits (52), Expect = 4e-18 Identities = 156/190 (82%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 1450 agtggttcagagagggagagttctcatggccgcaagtcgagtaaaaagggcaatcggtca 1509 ||||||||||||| ||||| |||||||||| ||||| | |||||||||||| || ||| Sbjct: 1407 agtggttcagagatagagagctctcatggccacaagttgcataaaaagggcaagcgatca 1466 Query: 1510 ggcaagaaaaaatctaatgtaattgttatacgcaatgtaaatgtaacatcaaggaagaag 1569 |||||||| ||| | | |||| |||| ||| | || | ||||| || |||| | ||| Sbjct: 1467 ggcaagaagaaacccagtgtagttgtcataaggaacatcaatgtgacgtcaa---aaaag 1523 Query: 1570 catgggtcatcagagagcgagtctcaatcaggttctgatgtggcatcagaggatagtgat 1629 ||||| ||||||||||||||||| ||| | |||||||||| ||||| ||||| |||||| Sbjct: 1524 catggctcatcagagagcgagtcacaaacgagttctgatgtagcatctgaggacagtgat 1583 Query: 1630 gattcacaca 1639 |||||||||| Sbjct: 1584 gattcacaca 1593 Score = 89.7 bits (45), Expect = 6e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 1159 aatggagatacaaatggcgaagatgctgctaaagctgatcacaggacacctcaacactta 1218 ||||||||| ||||||| ||||||||||||||||||||||| |||||| |||| |||| | Sbjct: 1113 aatggagatgcaaatggtgaagatgctgctaaagctgatcagaggacagctcagcactca 1172 Query: 1219 ggagctccc 1227 ||||||||| Sbjct: 1173 ggagctccc 1181 Score = 75.8 bits (38), Expect = 9e-10 Identities = 116/142 (81%) Strand = Plus / Plus Query: 337 atgaggccggacacgcgcctcgactcggccgcgttccagctcactccgacccgcaccagg 396 ||||||||||| ||||| || || || || | |||||||||||| || |||||||| ||| Sbjct: 270 atgaggccggagacgcggcttgattcagcggtgttccagctcacccccacccgcacaagg 329 Query: 397 tgtgatttggttgtggtggtgaatgggaggaaggagaagatcgcctccggcctgctcaac 456 |||||||| |||||| | | ||||| ||||||||||||| ||||| || |||| ||| Sbjct: 330 tgtgatttagttgtgatagcaaatggacggaaggagaagatagcctctggtttgctgaac 389 Query: 457 cccttcgtcgcccacctcaagg 478 || ||||| || || ||||||| Sbjct: 390 ccgttcgttgcacatctcaagg 411 Score = 71.9 bits (36), Expect = 1e-08 Identities = 63/72 (87%) Strand = Plus / Plus Query: 1756 caagatggagatcaaggaaactggaatgcgttccagaatttcttgctcagagacgaagag 1815 ||||||||||| |||||||||||||||| ||||||| ||||||||| ||| |||||| Sbjct: 1704 caagatggagaccaaggaaactggaatgtcttccagagtttcttgctaagaactgaagag 1763 Query: 1816 aagacaagagat 1827 ||||||| |||| Sbjct: 1764 aagacaaaagat 1775 Score = 54.0 bits (27), Expect = 0.003 Identities = 81/99 (81%) Strand = Plus / Plus Query: 547 ccatggttcaccaggggcaccatccagaggttcgtccgtttcgtgagcacgccggaggtc 606 |||||||| || ||||||||| | ||||||| ||||||||||| || || || |||||| Sbjct: 480 ccatggtttacaaggggcaccgtggagaggtttgtccgtttcgtcagtacaccagaggtc 539 Query: 607 ctggagcgggtcaccaccatcgagtccgagatactgcag 645 ||||| || || || || || ||||| |||||| ||||| Sbjct: 540 ctggaacgagtaacgactatagagtctgagatattgcag 578 Score = 52.0 bits (26), Expect = 0.013 Identities = 53/62 (85%) Strand = Plus / Plus Query: 729 aggtagcaagacaagttatgatcctgatggtgataaggcactcgttctgtacaagcctgg 788 |||||||||||||| ||| |||| |||||| ||||| |||| ||||||||||||| || Sbjct: 668 aggtagcaagacaaattacgatcttgatggggataaatcacttattctgtacaagccggg 727 Query: 789 ca 790 || Sbjct: 728 ca 729
>dbj|AK100706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115B06, full insert sequence Length = 4301 Score = 303 bits (153), Expect = 2e-78 Identities = 267/305 (87%) Strand = Plus / Plus Query: 832 gaggagcattcaaaagttcaacttctcagagtgctggagactcgcaagactgtcttacgt 891 |||||| |||||||||||||| | || ||||| |||||||||||||| | |||||||||| Sbjct: 772 gaggagaattcaaaagttcaattacttagagttctggagactcgcaaaattgtcttacgt 831 Query: 892 aaagagcaggctatggcctttgcccgtgctgtagctgctggttttgatatagacaacctg 951 || |||||||||||||||||||| ||||||||||| ||||| ||| |||| ||||||||| Sbjct: 832 aaggagcaggctatggcctttgcgcgtgctgtagcggctgggtttaatattgacaacctg 891 Query: 952 ctatatttgatatcgttcgcagagcgttttggtgcttcacgcttgatgaaggcgtgtaca 1011 || |||||| | |||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 892 ggatttttgatcacattcgcagaccgttttggtgcttcacgcttgatgaaggcatgcaca 951 Query: 1012 cagttcattgatttgtggaggcaaaaacatgaaactggacagtggattgacgttgaacct 1071 ||||||| ||| |||||||| ||| ||||||||||| || |||||||| |||||||| Sbjct: 952 cagttcactgagttgtggagaagaaagcatgaaactggccaatggattgaagttgaaccg 1011 Query: 1072 gaagcaatgtctgcacgctctgaatttcctcccttcaatgctgctggcattatgttaatg 1131 || |||||||||||||| ||||||||||||||||| |||||| |||| |||||||| ||| Sbjct: 1012 gaggcaatgtctgcacggtctgaatttcctccctttaatgcttctggaattatgtttatg 1071 Query: 1132 ggaga 1136 ||||| Sbjct: 1072 ggaga 1076 Score = 262 bits (132), Expect = 7e-66 Identities = 476/590 (80%), Gaps = 3/590 (0%) Strand = Plus / Plus Query: 1976 cagccaatgggagaattagggccaggcagatgatgtctggtgatgagcttatgatgtctg 2035 ||||| ||||||| |||||| ||||| | ||| |||||||||| || ||| |||| || | Sbjct: 1916 cagcccatgggaggattaggtccaggaaaatgctgtctggtgacgaacttgtgatctcgg 1975 Query: 2036 gggaaggtcggagttttgtgggtggtgacatgaaggagatagaagctggaggtggaggat 2095 |||||| |||||||||||| ||| || || |||||||||||||||||||||||||||| Sbjct: 1976 ctgaaggtaggagttttgtggatggcgatattaaggagatagaagctggaggtggaggat 2035 Query: 2096 acaggagaggttcgaatgatgacttcatggtttatggacatgacaactcaatggacaggg 2155 |||||||||| | | ||| |||||||| |||||||| || || || |||||||||| | Sbjct: 2036 acaggagaggagcaagtgaagacttcatcgtttatggtcaggaaaagccaatggacagtg 2095 Query: 2156 ggagctctttggaccccctcgccgaggcacattacaaaagacccactctggaggaaaaga 2215 |||| | |||||| || || || |||| ||| ||||| || || || ||| |||||||| Sbjct: 2096 ggagttatttggatcctcttgcagagggacagtacaagagtccaaccctgatggaaaaga 2155 Query: 2216 agaatgtgcacactatgagcgacgagtctttcatgatacgtgttagctccaactcacaca 2275 | | |||| | | || || ||||| || ||||||| |||||| || |||||||| Sbjct: 2156 aca---tgcatagtgtggctgatgagtcctttatgatacctgttaggtctaactcacagg 2212 Query: 2276 ataatcttggagcagacggccgtactgcgattgacatagatgccgagcttggctcaagtg 2335 ||||||||||| |||| || |||| || ||||| ||||||| |||||| || || Sbjct: 2213 ataatcttggaccagaaagctgtaccgccattgatatagatgttgagcttcctggaactg 2272 Query: 2336 ttcagaaaacatcagatgccaaggctggaggtcaacttttctatgagccagatgagttga 2395 || |||| ||| ||||||| |||||||||| ||||||||||||||||| |||||||||| Sbjct: 2273 ttaagaagacaacagatgcaaaggctggagaccaacttttctatgagcccgatgagttga 2332 Query: 2396 ttccagagcgtggatttgaagatgtgtcatttggatatgacccatcaatggactatgata 2455 | |||||||||| || ||||||||| ||| ||||||||| ||| ||||||||||||||| Sbjct: 2333 tgccagagcgtgaatatgaagatgtcacatatggatatgatccagcaatggactatgata 2392 Query: 2456 gccacatgcagattcaacatgacgtcagtattgaagatgcaaatgcagaggatttatctg 2515 |||| ||||||||||||| || | ||| |||||||||||||||| || ||| |||| Sbjct: 2393 gccagatgcagattcaacctgccatcatggttgaagatgcaaatgcggatgatgtatcac 2452 Query: 2516 tttgcgtcgagagtgaagaaaagacgcctgggaaagataagaagcttaga 2565 | | || ||| |||||| ||||| || | ||||||||||||||||||| Sbjct: 2453 tgggggttgagggtgaagtaaagaagctagagaaagataagaagcttaga 2502 Score = 188 bits (95), Expect = 9e-44 Identities = 163/185 (88%), Gaps = 3/185 (1%) Strand = Plus / Plus Query: 1233 tggtccatatcaatcaggatatccaccatgggcaatgcatccgccttaccccatgcaagg 1292 ||||||||||||||||| |||||||||||||||||| ||||| || || ||||||||||| Sbjct: 1197 tggtccatatcaatcagcatatccaccatgggcaattcatccaccatatcccatgcaagg 1256 Query: 1293 catgccaccatactaccctggggcaaacccatattaccctcctccctaccccccaacaga 1352 |||||| ||||||||||||| |||||||| |||||||| ||||||||||||| || Sbjct: 1257 catgcct---tactaccctggggtgaacccatactaccctccaccctaccccccaatgga 1313 Query: 1353 tgatcccaggtacaaccactcagaaaggagaccatcaaggaagaactcatcagatagcaa 1412 |||||| |||||| |||||||||| |||||| |||||||||| |||| ||||||||||| Sbjct: 1314 tgatcctaggtaccaccactcagagaggagagtatcaaggaagcactcgtcagatagcaa 1373 Query: 1413 ggact 1417 ||||| Sbjct: 1374 ggact 1378 Score = 165 bits (83), Expect = 1e-36 Identities = 128/143 (89%) Strand = Plus / Plus Query: 2638 ctaactgatgcacagaaacgtgcgcaaaacctacgggcgtacaaagcgggccttcaaaag 2697 ||||| ||||||||||||||||| |||||||| ||||| || ||||| | |||||||||| Sbjct: 2569 ctaacagatgcacagaaacgtgcacaaaacctgcgggcatataaagcagaccttcaaaag 2628 Query: 2698 gaaaagaaagagctggaagcggagcagatgaaacggctcgaaaggcttaagcaagagagg 2757 | ||||||||||| ||||| ||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 2629 gcaaagaaagagcaggaagaggaacagattaaacggctggaaaggcttaagcaagagagg 2688 Query: 2758 caaaagagaattgctgcaagaag 2780 || ||||| |||||||||||||| Sbjct: 2689 cagaagaggattgctgcaagaag 2711 Score = 103 bits (52), Expect = 4e-18 Identities = 156/190 (82%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 1450 agtggttcagagagggagagttctcatggccgcaagtcgagtaaaaagggcaatcggtca 1509 ||||||||||||| ||||| |||||||||| ||||| | |||||||||||| || ||| Sbjct: 1408 agtggttcagagatagagagctctcatggccacaagttgcataaaaagggcaagcgatca 1467 Query: 1510 ggcaagaaaaaatctaatgtaattgttatacgcaatgtaaatgtaacatcaaggaagaag 1569 |||||||| ||| | | |||| |||| ||| | || | ||||| || |||| | ||| Sbjct: 1468 ggcaagaagaaacccagtgtagttgtcataaggaacatcaatgtgacgtcaa---aaaag 1524 Query: 1570 catgggtcatcagagagcgagtctcaatcaggttctgatgtggcatcagaggatagtgat 1629 ||||| ||||||||||||||||| ||| | |||||||||| ||||| ||||| |||||| Sbjct: 1525 catggctcatcagagagcgagtcacaaacgagttctgatgtagcatctgaggacagtgat 1584 Query: 1630 gattcacaca 1639 |||||||||| Sbjct: 1585 gattcacaca 1594 Score = 89.7 bits (45), Expect = 6e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 1159 aatggagatacaaatggcgaagatgctgctaaagctgatcacaggacacctcaacactta 1218 ||||||||| ||||||| ||||||||||||||||||||||| |||||| |||| |||| | Sbjct: 1114 aatggagatgcaaatggtgaagatgctgctaaagctgatcagaggacagctcagcactca 1173 Query: 1219 ggagctccc 1227 ||||||||| Sbjct: 1174 ggagctccc 1182 Score = 75.8 bits (38), Expect = 9e-10 Identities = 116/142 (81%) Strand = Plus / Plus Query: 337 atgaggccggacacgcgcctcgactcggccgcgttccagctcactccgacccgcaccagg 396 ||||||||||| ||||| || || || || | |||||||||||| || |||||||| ||| Sbjct: 271 atgaggccggagacgcggcttgattcagcggtgttccagctcacccccacccgcacaagg 330 Query: 397 tgtgatttggttgtggtggtgaatgggaggaaggagaagatcgcctccggcctgctcaac 456 |||||||| |||||| | | ||||| ||||||||||||| ||||| || |||| ||| Sbjct: 331 tgtgatttagttgtgatagcaaatggacggaaggagaagatagcctctggtttgctgaac 390 Query: 457 cccttcgtcgcccacctcaagg 478 || ||||| || || ||||||| Sbjct: 391 ccgttcgttgcacatctcaagg 412 Score = 71.9 bits (36), Expect = 1e-08 Identities = 63/72 (87%) Strand = Plus / Plus Query: 1756 caagatggagatcaaggaaactggaatgcgttccagaatttcttgctcagagacgaagag 1815 ||||||||||| |||||||||||||||| ||||||| ||||||||| ||| |||||| Sbjct: 1705 caagatggagaccaaggaaactggaatgtcttccagagtttcttgctaagaactgaagag 1764 Query: 1816 aagacaagagat 1827 ||||||| |||| Sbjct: 1765 aagacaaaagat 1776 Score = 54.0 bits (27), Expect = 0.003 Identities = 81/99 (81%) Strand = Plus / Plus Query: 547 ccatggttcaccaggggcaccatccagaggttcgtccgtttcgtgagcacgccggaggtc 606 |||||||| || ||||||||| | ||||||| ||||||||||| || || || |||||| Sbjct: 481 ccatggtttacaaggggcaccgtggagaggtttgtccgtttcgtcagtacaccagaggtc 540 Query: 607 ctggagcgggtcaccaccatcgagtccgagatactgcag 645 ||||| || || || || || ||||| |||||| ||||| Sbjct: 541 ctggaacgagtaacgactatagagtctgagatattgcag 579 Score = 52.0 bits (26), Expect = 0.013 Identities = 53/62 (85%) Strand = Plus / Plus Query: 729 aggtagcaagacaagttatgatcctgatggtgataaggcactcgttctgtacaagcctgg 788 |||||||||||||| ||| |||| |||||| ||||| |||| ||||||||||||| || Sbjct: 669 aggtagcaagacaaattacgatcttgatggggataaatcacttattctgtacaagccggg 728 Query: 789 ca 790 || Sbjct: 729 ca 730
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 262 bits (132), Expect = 7e-66 Identities = 476/590 (80%), Gaps = 3/590 (0%) Strand = Plus / Plus Query: 1976 cagccaatgggagaattagggccaggcagatgatgtctggtgatgagcttatgatgtctg 2035 ||||| ||||||| |||||| ||||| | ||| |||||||||| || ||| |||| || | Sbjct: 109682 cagcccatgggaggattaggtccaggaaaatgctgtctggtgacgaacttgtgatctcgg 109741 Query: 2036 gggaaggtcggagttttgtgggtggtgacatgaaggagatagaagctggaggtggaggat 2095 |||||| |||||||||||| ||| || || |||||||||||||||||||||||||||| Sbjct: 109742 ctgaaggtaggagttttgtggatggcgatattaaggagatagaagctggaggtggaggat 109801 Query: 2096 acaggagaggttcgaatgatgacttcatggtttatggacatgacaactcaatggacaggg 2155 |||||||||| | | ||| |||||||| |||||||| || || || |||||||||| | Sbjct: 109802 acaggagaggagcaagtgaagacttcatcgtttatggtcaggaaaagccaatggacagtg 109861 Query: 2156 ggagctctttggaccccctcgccgaggcacattacaaaagacccactctggaggaaaaga 2215 |||| | |||||| || || || |||| ||| ||||| || || || ||| |||||||| Sbjct: 109862 ggagttatttggatcctcttgcagagggacagtacaagagtccaaccctgatggaaaaga 109921 Query: 2216 agaatgtgcacactatgagcgacgagtctttcatgatacgtgttagctccaactcacaca 2275 | | |||| | | || || ||||| || ||||||| |||||| || |||||||| Sbjct: 109922 aca---tgcatagtgtggctgatgagtcctttatgatacctgttaggtctaactcacagg 109978 Query: 2276 ataatcttggagcagacggccgtactgcgattgacatagatgccgagcttggctcaagtg 2335 ||||||||||| |||| || |||| || ||||| ||||||| |||||| || || Sbjct: 109979 ataatcttggaccagaaagctgtaccgccattgatatagatgttgagcttcctggaactg 110038 Query: 2336 ttcagaaaacatcagatgccaaggctggaggtcaacttttctatgagccagatgagttga 2395 || |||| ||| ||||||| |||||||||| ||||||||||||||||| |||||||||| Sbjct: 110039 ttaagaagacaacagatgcaaaggctggagaccaacttttctatgagcccgatgagttga 110098 Query: 2396 ttccagagcgtggatttgaagatgtgtcatttggatatgacccatcaatggactatgata 2455 | |||||||||| || ||||||||| ||| ||||||||| ||| ||||||||||||||| Sbjct: 110099 tgccagagcgtgaatatgaagatgtcacatatggatatgatccagcaatggactatgata 110158 Query: 2456 gccacatgcagattcaacatgacgtcagtattgaagatgcaaatgcagaggatttatctg 2515 |||| ||||||||||||| || | ||| |||||||||||||||| || ||| |||| Sbjct: 110159 gccagatgcagattcaacctgccatcatggttgaagatgcaaatgcggatgatgtatcac 110218 Query: 2516 tttgcgtcgagagtgaagaaaagacgcctgggaaagataagaagcttaga 2565 | | || ||| |||||| ||||| || | ||||||||||||||||||| Sbjct: 110219 tgggggttgagggtgaagtaaagaagctagagaaagataagaagcttaga 110268 Score = 188 bits (95), Expect = 9e-44 Identities = 163/185 (88%), Gaps = 3/185 (1%) Strand = Plus / Plus Query: 1233 tggtccatatcaatcaggatatccaccatgggcaatgcatccgccttaccccatgcaagg 1292 ||||||||||||||||| |||||||||||||||||| ||||| || || ||||||||||| Sbjct: 108963 tggtccatatcaatcagcatatccaccatgggcaattcatccaccatatcccatgcaagg 109022 Query: 1293 catgccaccatactaccctggggcaaacccatattaccctcctccctaccccccaacaga 1352 |||||| ||||||||||||| |||||||| |||||||| ||||||||||||| || Sbjct: 109023 catgcct---tactaccctggggtgaacccatactaccctccaccctaccccccaatgga 109079 Query: 1353 tgatcccaggtacaaccactcagaaaggagaccatcaaggaagaactcatcagatagcaa 1412 |||||| |||||| |||||||||| |||||| |||||||||| |||| ||||||||||| Sbjct: 109080 tgatcctaggtaccaccactcagagaggagagtatcaaggaagcactcgtcagatagcaa 109139 Query: 1413 ggact 1417 ||||| Sbjct: 109140 ggact 109144 Score = 155 bits (78), Expect = 1e-33 Identities = 135/154 (87%) Strand = Plus / Plus Query: 846 agttcaacttctcagagtgctggagactcgcaagactgtcttacgtaaagagcaggctat 905 ||||||| | || ||||| |||||||||||||| | |||||||||||| ||||||||||| Sbjct: 107791 agttcaattacttagagttctggagactcgcaaaattgtcttacgtaaggagcaggctat 107850 Query: 906 ggcctttgcccgtgctgtagctgctggttttgatatagacaacctgctatatttgatatc 965 ||||||||| ||||||||||| ||||| ||| |||| ||||||||| || |||||| | Sbjct: 107851 ggcctttgcgcgtgctgtagcggctgggtttaatattgacaacctgggatttttgatcac 107910 Query: 966 gttcgcagagcgttttggtgcttcacgcttgatg 999 |||||||| |||||||||||||||||||||||| Sbjct: 107911 attcgcagaccgttttggtgcttcacgcttgatg 107944 Score = 131 bits (66), Expect = 2e-26 Identities = 120/138 (86%) Strand = Plus / Plus Query: 999 gaaggcgtgtacacagttcattgatttgtggaggcaaaaacatgaaactggacagtggat 1058 |||||| || |||||||||| ||| |||||||| ||| ||||||||||| || ||||| Sbjct: 108386 gaaggcatgcacacagttcactgagttgtggagaagaaagcatgaaactggccaatggat 108445 Query: 1059 tgacgttgaacctgaagcaatgtctgcacgctctgaatttcctcccttcaatgctgctgg 1118 ||| |||||||| || |||||||||||||| ||||||||||||||||| |||||| |||| Sbjct: 108446 tgaagttgaaccggaggcaatgtctgcacggtctgaatttcctccctttaatgcttctgg 108505 Query: 1119 cattatgttaatgggaga 1136 |||||||| |||||||| Sbjct: 108506 aattatgtttatgggaga 108523 Score = 103 bits (52), Expect = 4e-18 Identities = 156/190 (82%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 1450 agtggttcagagagggagagttctcatggccgcaagtcgagtaaaaagggcaatcggtca 1509 ||||||||||||| ||||| |||||||||| ||||| | |||||||||||| || ||| Sbjct: 109174 agtggttcagagatagagagctctcatggccacaagttgcataaaaagggcaagcgatca 109233 Query: 1510 ggcaagaaaaaatctaatgtaattgttatacgcaatgtaaatgtaacatcaaggaagaag 1569 |||||||| ||| | | |||| |||| ||| | || | ||||| || |||| | ||| Sbjct: 109234 ggcaagaagaaacccagtgtagttgtcataaggaacatcaatgtgacgtcaa---aaaag 109290 Query: 1570 catgggtcatcagagagcgagtctcaatcaggttctgatgtggcatcagaggatagtgat 1629 ||||| ||||||||||||||||| ||| | |||||||||| ||||| ||||| |||||| Sbjct: 109291 catggctcatcagagagcgagtcacaaacgagttctgatgtagcatctgaggacagtgat 109350 Query: 1630 gattcacaca 1639 |||||||||| Sbjct: 109351 gattcacaca 109360 Score = 89.7 bits (45), Expect = 6e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 2712 ggaagcggagcagatgaaacggctcgaaaggcttaagcaagagaggcaaaagagaattgc 2771 ||||| ||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 111996 ggaagaggaacagattaaacggctggaaaggcttaagcaagagaggcagaagaggattgc 112055 Query: 2772 tgcaagaag 2780 ||||||||| Sbjct: 112056 tgcaagaag 112064 Score = 81.8 bits (41), Expect = 1e-11 Identities = 65/73 (89%) Strand = Plus / Plus Query: 2638 ctaactgatgcacagaaacgtgcgcaaaacctacgggcgtacaaagcgggccttcaaaag 2697 ||||| ||||||||||||||||| |||||||| ||||| || ||||| | |||||||||| Sbjct: 110335 ctaacagatgcacagaaacgtgcacaaaacctgcgggcatataaagcagaccttcaaaag 110394 Query: 2698 gaaaagaaagagc 2710 | ||||||||||| Sbjct: 110395 gcaaagaaagagc 110407 Score = 71.9 bits (36), Expect = 1e-08 Identities = 63/72 (87%) Strand = Plus / Plus Query: 1756 caagatggagatcaaggaaactggaatgcgttccagaatttcttgctcagagacgaagag 1815 ||||||||||| |||||||||||||||| ||||||| ||||||||| ||| |||||| Sbjct: 109471 caagatggagaccaaggaaactggaatgtcttccagagtttcttgctaagaactgaagag 109530 Query: 1816 aagacaagagat 1827 ||||||| |||| Sbjct: 109531 aagacaaaagat 109542 Score = 58.0 bits (29), Expect = 2e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1159 aatggagatacaaatggcgaagatgctgctaaagctg 1195 ||||||||| ||||||| ||||||||||||||||||| Sbjct: 108561 aatggagatgcaaatggtgaagatgctgctaaagctg 108597 Score = 46.1 bits (23), Expect = 0.81 Identities = 47/55 (85%) Strand = Plus / Plus Query: 729 aggtagcaagacaagttatgatcctgatggtgataaggcactcgttctgtacaag 783 |||||||||||||| ||| |||| |||||| ||||| |||| ||||||||||| Sbjct: 107246 aggtagcaagacaaattacgatcttgatggggataaatcacttattctgtacaag 107300 Score = 44.1 bits (22), Expect = 3.2 Identities = 52/62 (83%) Strand = Plus / Plus Query: 337 atgaggccggacacgcgcctcgactcggccgcgttccagctcactccgacccgcaccagg 396 ||||||||||| ||||| || || || || | |||||||||||| || |||||||| ||| Sbjct: 105735 atgaggccggagacgcggcttgattcagcggtgttccagctcacccccacccgcacaagg 105794 Query: 397 tg 398 || Sbjct: 105795 tg 105796
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 262 bits (132), Expect = 7e-66 Identities = 476/590 (80%), Gaps = 3/590 (0%) Strand = Plus / Plus Query: 1976 cagccaatgggagaattagggccaggcagatgatgtctggtgatgagcttatgatgtctg 2035 ||||| ||||||| |||||| ||||| | ||| |||||||||| || ||| |||| || | Sbjct: 36138245 cagcccatgggaggattaggtccaggaaaatgctgtctggtgacgaacttgtgatctcgg 36138304 Query: 2036 gggaaggtcggagttttgtgggtggtgacatgaaggagatagaagctggaggtggaggat 2095 |||||| |||||||||||| ||| || || |||||||||||||||||||||||||||| Sbjct: 36138305 ctgaaggtaggagttttgtggatggcgatattaaggagatagaagctggaggtggaggat 36138364 Query: 2096 acaggagaggttcgaatgatgacttcatggtttatggacatgacaactcaatggacaggg 2155 |||||||||| | | ||| |||||||| |||||||| || || || |||||||||| | Sbjct: 36138365 acaggagaggagcaagtgaagacttcatcgtttatggtcaggaaaagccaatggacagtg 36138424 Query: 2156 ggagctctttggaccccctcgccgaggcacattacaaaagacccactctggaggaaaaga 2215 |||| | |||||| || || || |||| ||| ||||| || || || ||| |||||||| Sbjct: 36138425 ggagttatttggatcctcttgcagagggacagtacaagagtccaaccctgatggaaaaga 36138484 Query: 2216 agaatgtgcacactatgagcgacgagtctttcatgatacgtgttagctccaactcacaca 2275 | | |||| | | || || ||||| || ||||||| |||||| || |||||||| Sbjct: 36138485 aca---tgcatagtgtggctgatgagtcctttatgatacctgttaggtctaactcacagg 36138541 Query: 2276 ataatcttggagcagacggccgtactgcgattgacatagatgccgagcttggctcaagtg 2335 ||||||||||| |||| || |||| || ||||| ||||||| |||||| || || Sbjct: 36138542 ataatcttggaccagaaagctgtaccgccattgatatagatgttgagcttcctggaactg 36138601 Query: 2336 ttcagaaaacatcagatgccaaggctggaggtcaacttttctatgagccagatgagttga 2395 || |||| ||| ||||||| |||||||||| ||||||||||||||||| |||||||||| Sbjct: 36138602 ttaagaagacaacagatgcaaaggctggagaccaacttttctatgagcccgatgagttga 36138661 Query: 2396 ttccagagcgtggatttgaagatgtgtcatttggatatgacccatcaatggactatgata 2455 | |||||||||| || ||||||||| ||| ||||||||| ||| ||||||||||||||| Sbjct: 36138662 tgccagagcgtgaatatgaagatgtcacatatggatatgatccagcaatggactatgata 36138721 Query: 2456 gccacatgcagattcaacatgacgtcagtattgaagatgcaaatgcagaggatttatctg 2515 |||| ||||||||||||| || | ||| |||||||||||||||| || ||| |||| Sbjct: 36138722 gccagatgcagattcaacctgccatcatggttgaagatgcaaatgcggatgatgtatcac 36138781 Query: 2516 tttgcgtcgagagtgaagaaaagacgcctgggaaagataagaagcttaga 2565 | | || ||| |||||| ||||| || | ||||||||||||||||||| Sbjct: 36138782 tgggggttgagggtgaagtaaagaagctagagaaagataagaagcttaga 36138831 Score = 188 bits (95), Expect = 9e-44 Identities = 163/185 (88%), Gaps = 3/185 (1%) Strand = Plus / Plus Query: 1233 tggtccatatcaatcaggatatccaccatgggcaatgcatccgccttaccccatgcaagg 1292 ||||||||||||||||| |||||||||||||||||| ||||| || || ||||||||||| Sbjct: 36137526 tggtccatatcaatcagcatatccaccatgggcaattcatccaccatatcccatgcaagg 36137585 Query: 1293 catgccaccatactaccctggggcaaacccatattaccctcctccctaccccccaacaga 1352 |||||| ||||||||||||| |||||||| |||||||| ||||||||||||| || Sbjct: 36137586 catgcct---tactaccctggggtgaacccatactaccctccaccctaccccccaatgga 36137642 Query: 1353 tgatcccaggtacaaccactcagaaaggagaccatcaaggaagaactcatcagatagcaa 1412 |||||| |||||| |||||||||| |||||| |||||||||| |||| ||||||||||| Sbjct: 36137643 tgatcctaggtaccaccactcagagaggagagtatcaaggaagcactcgtcagatagcaa 36137702 Query: 1413 ggact 1417 ||||| Sbjct: 36137703 ggact 36137707 Score = 155 bits (78), Expect = 1e-33 Identities = 135/154 (87%) Strand = Plus / Plus Query: 846 agttcaacttctcagagtgctggagactcgcaagactgtcttacgtaaagagcaggctat 905 ||||||| | || ||||| |||||||||||||| | |||||||||||| ||||||||||| Sbjct: 36136354 agttcaattacttagagttctggagactcgcaaaattgtcttacgtaaggagcaggctat 36136413 Query: 906 ggcctttgcccgtgctgtagctgctggttttgatatagacaacctgctatatttgatatc 965 ||||||||| ||||||||||| ||||| ||| |||| ||||||||| || |||||| | Sbjct: 36136414 ggcctttgcgcgtgctgtagcggctgggtttaatattgacaacctgggatttttgatcac 36136473 Query: 966 gttcgcagagcgttttggtgcttcacgcttgatg 999 |||||||| |||||||||||||||||||||||| Sbjct: 36136474 attcgcagaccgttttggtgcttcacgcttgatg 36136507 Score = 131 bits (66), Expect = 2e-26 Identities = 120/138 (86%) Strand = Plus / Plus Query: 999 gaaggcgtgtacacagttcattgatttgtggaggcaaaaacatgaaactggacagtggat 1058 |||||| || |||||||||| ||| |||||||| ||| ||||||||||| || ||||| Sbjct: 36136949 gaaggcatgcacacagttcactgagttgtggagaagaaagcatgaaactggccaatggat 36137008 Query: 1059 tgacgttgaacctgaagcaatgtctgcacgctctgaatttcctcccttcaatgctgctgg 1118 ||| |||||||| || |||||||||||||| ||||||||||||||||| |||||| |||| Sbjct: 36137009 tgaagttgaaccggaggcaatgtctgcacggtctgaatttcctccctttaatgcttctgg 36137068 Query: 1119 cattatgttaatgggaga 1136 |||||||| |||||||| Sbjct: 36137069 aattatgtttatgggaga 36137086 Score = 103 bits (52), Expect = 4e-18 Identities = 156/190 (82%), Gaps = 3/190 (1%) Strand = Plus / Plus Query: 1450 agtggttcagagagggagagttctcatggccgcaagtcgagtaaaaagggcaatcggtca 1509 ||||||||||||| ||||| |||||||||| ||||| | |||||||||||| || ||| Sbjct: 36137737 agtggttcagagatagagagctctcatggccacaagttgcataaaaagggcaagcgatca 36137796 Query: 1510 ggcaagaaaaaatctaatgtaattgttatacgcaatgtaaatgtaacatcaaggaagaag 1569 |||||||| ||| | | |||| |||| ||| | || | ||||| || |||| | ||| Sbjct: 36137797 ggcaagaagaaacccagtgtagttgtcataaggaacatcaatgtgacgtcaa---aaaag 36137853 Query: 1570 catgggtcatcagagagcgagtctcaatcaggttctgatgtggcatcagaggatagtgat 1629 ||||| ||||||||||||||||| ||| | |||||||||| ||||| ||||| |||||| Sbjct: 36137854 catggctcatcagagagcgagtcacaaacgagttctgatgtagcatctgaggacagtgat 36137913 Query: 1630 gattcacaca 1639 |||||||||| Sbjct: 36137914 gattcacaca 36137923 Score = 89.7 bits (45), Expect = 6e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 2712 ggaagcggagcagatgaaacggctcgaaaggcttaagcaagagaggcaaaagagaattgc 2771 ||||| ||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 36140559 ggaagaggaacagattaaacggctggaaaggcttaagcaagagaggcagaagaggattgc 36140618 Query: 2772 tgcaagaag 2780 ||||||||| Sbjct: 36140619 tgcaagaag 36140627 Score = 81.8 bits (41), Expect = 1e-11 Identities = 65/73 (89%) Strand = Plus / Plus Query: 2638 ctaactgatgcacagaaacgtgcgcaaaacctacgggcgtacaaagcgggccttcaaaag 2697 ||||| ||||||||||||||||| |||||||| ||||| || ||||| | |||||||||| Sbjct: 36138898 ctaacagatgcacagaaacgtgcacaaaacctgcgggcatataaagcagaccttcaaaag 36138957 Query: 2698 gaaaagaaagagc 2710 | ||||||||||| Sbjct: 36138958 gcaaagaaagagc 36138970 Score = 71.9 bits (36), Expect = 1e-08 Identities = 63/72 (87%) Strand = Plus / Plus Query: 1756 caagatggagatcaaggaaactggaatgcgttccagaatttcttgctcagagacgaagag 1815 ||||||||||| |||||||||||||||| ||||||| ||||||||| ||| |||||| Sbjct: 36138034 caagatggagaccaaggaaactggaatgtcttccagagtttcttgctaagaactgaagag 36138093 Query: 1816 aagacaagagat 1827 ||||||| |||| Sbjct: 36138094 aagacaaaagat 36138105 Score = 58.0 bits (29), Expect = 2e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 1159 aatggagatacaaatggcgaagatgctgctaaagctg 1195 ||||||||| ||||||| ||||||||||||||||||| Sbjct: 36137124 aatggagatgcaaatggtgaagatgctgctaaagctg 36137160 Score = 46.1 bits (23), Expect = 0.81 Identities = 47/55 (85%) Strand = Plus / Plus Query: 729 aggtagcaagacaagttatgatcctgatggtgataaggcactcgttctgtacaag 783 |||||||||||||| ||| |||| |||||| ||||| |||| ||||||||||| Sbjct: 36135809 aggtagcaagacaaattacgatcttgatggggataaatcacttattctgtacaag 36135863 Score = 44.1 bits (22), Expect = 3.2 Identities = 52/62 (83%) Strand = Plus / Plus Query: 337 atgaggccggacacgcgcctcgactcggccgcgttccagctcactccgacccgcaccagg 396 ||||||||||| ||||| || || || || | |||||||||||| || |||||||| ||| Sbjct: 36134298 atgaggccggagacgcggcttgattcagcggtgttccagctcacccccacccgcacaagg 36134357 Query: 397 tg 398 || Sbjct: 36134358 tg 36134359
>ref|NM_001066068.1| Oryza sativa (japonica cultivar-group) Os07g0445600 (Os07g0445600) mRNA, complete cds Length = 3627 Score = 184 bits (93), Expect = 1e-42 Identities = 222/265 (83%) Strand = Plus / Plus Query: 839 attcaaaagttcaacttctcagagtgctggagactcgcaagactgtcttacgtaaagagc 898 |||||||||| ||||| || |||||||| || || || || | ||||||| | ||||||| Sbjct: 1010 attcaaaagtccaactgctgagagtgcttgaaacccgaaaaaatgtcttaaggaaagagc 1069 Query: 899 aggctatggcctttgcccgtgctgtagctgctggttttgatatagacaacctgctatatt 958 |||||||||| ||||| |||||||| || ||||| ||||| || ||||| ||| || | Sbjct: 1070 aggctatggcttttgcacgtgctgtggcagctgggtttgacatcgacaatctgggttact 1129 Query: 959 tgatatcgttcgcagagcgttttggtgcttcacgcttgatgaaggcgtgtacacagttca 1018 |||| |||| |||||||| |||||||||||||| ||||||| ||| ||| | ||||||| Sbjct: 1130 tgattgcgtttgcagagcgctttggtgcttcacgtttgatgagggcatgttcgcagttca 1189 Query: 1019 ttgatttgtggaggcaaaaacatgaaactggacagtggattgacgttgaacctgaagcaa 1078 | || |||||| || ||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 1190 tcgaactgtggaagcgaaagcatgaaactggacaatggattgaagttgaaccagaagcaa 1249 Query: 1079 tgtctgcacgctctgaatttcctcc 1103 ||||| ||| ||||||||||||||| Sbjct: 1250 tgtctacacactctgaatttcctcc 1274 Score = 99.6 bits (50), Expect = 6e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 362 cggccgcgttccagctcactccgacccgcaccaggtgtgatttggttgtggtggtgaatg 421 |||||| |||||||||||| |||||||| ||||||| |||||||| ||| | ||||||| Sbjct: 527 cggccgtgttccagctcaccccgacccggaccaggttcgatttggtggtgatagtgaatg 586 Query: 422 ggaggaaggagaagatcgcctccggcctgctcaaccccttcgtcgcccacctcaaggccg 481 | ||||||||||||| ||||| |||||||| ||||| ||| | || ||||| |||| || Sbjct: 587 gccggaaggagaagatagcctctggcctgctaaacccgttcctggcacacctgaaggtcg 646 Query: 482 cacaggaccagatcgccaaggg 503 | ||||| ||||| || ||||| Sbjct: 647 cccaggatcagattgcaaaggg 668 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 2339 agaaaacatcagatgccaaggctggaggtcaacttttctatgagccagatgagttgattc 2398 ||||||| ||||||| ||||||||| |||||| ||||||||||| ||||| ||||| | Sbjct: 2474 agaaaacttcagatgggaaggctggaactcaactcttctatgagccggatgaattgatgc 2533 Query: 2399 cagagcgtggatttgaagatgtgtcatttggatatga 2435 |||||||||||| |||||||| |||||||||||||| Sbjct: 2534 cagagcgtggatctgaagatgcttcatttggatatga 2570 Score = 75.8 bits (38), Expect = 9e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 2016 tgatgagcttatgatgtctggggaaggtcggagttttgtgggtggtgacatgaaggagat 2075 |||||| || ||||||||||||||||| | || | | ||| |||||| || |||||||| Sbjct: 2154 tgatgaactgatgatgtctggggaagggggaagatatatggatggtgaaattaaggagat 2213 Query: 2076 agaagctggaggtggaggatacaggagagg 2105 ||||||||| |||||| ||||||||||||| Sbjct: 2214 agaagctggtggtggaagatacaggagagg 2243 Score = 52.0 bits (26), Expect = 0.013 Identities = 95/118 (80%) Strand = Plus / Plus Query: 543 cgcgccatggttcaccaggggcaccatccagaggttcgtccgtttcgtgagcacgccgga 602 |||||||||||| || || |||||| | |||| ||||| || |||||||| || ||||| Sbjct: 708 cgcgccatggtttacaagaggcaccgtggagagattcgtgcgcttcgtgagtactccgga 767 Query: 603 ggtcctggagcgggtcaccaccatcgagtccgagatactgcagctccacgacgccatc 660 ||| || ||||| || || || || || |||||||| |||||||| | ||||||||| Sbjct: 768 ggtgcttgagcgagtgacgacgatagaatccgagatcttgcagctcgaggacgccatc 825 Score = 50.1 bits (25), Expect = 0.052 Identities = 37/41 (90%) Strand = Plus / Plus Query: 2740 aggcttaagcaagagaggcaaaagagaattgctgcaagaag 2780 |||||||| | |||||||||||||||||| || |||||||| Sbjct: 3022 aggcttaaactagagaggcaaaagagaatagccgcaagaag 3062
>dbj|AK074000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073D02, full insert sequence Length = 3630 Score = 184 bits (93), Expect = 1e-42 Identities = 222/265 (83%) Strand = Plus / Plus Query: 839 attcaaaagttcaacttctcagagtgctggagactcgcaagactgtcttacgtaaagagc 898 |||||||||| ||||| || |||||||| || || || || | ||||||| | ||||||| Sbjct: 1011 attcaaaagtccaactgctgagagtgcttgaaacccgaaaaaatgtcttaaggaaagagc 1070 Query: 899 aggctatggcctttgcccgtgctgtagctgctggttttgatatagacaacctgctatatt 958 |||||||||| ||||| |||||||| || ||||| ||||| || ||||| ||| || | Sbjct: 1071 aggctatggcttttgcacgtgctgtggcagctgggtttgacatcgacaatctgggttact 1130 Query: 959 tgatatcgttcgcagagcgttttggtgcttcacgcttgatgaaggcgtgtacacagttca 1018 |||| |||| |||||||| |||||||||||||| ||||||| ||| ||| | ||||||| Sbjct: 1131 tgattgcgtttgcagagcgctttggtgcttcacgtttgatgagggcatgttcgcagttca 1190 Query: 1019 ttgatttgtggaggcaaaaacatgaaactggacagtggattgacgttgaacctgaagcaa 1078 | || |||||| || ||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 1191 tcgaactgtggaagcgaaagcatgaaactggacaatggattgaagttgaaccagaagcaa 1250 Query: 1079 tgtctgcacgctctgaatttcctcc 1103 ||||| ||| ||||||||||||||| Sbjct: 1251 tgtctacacactctgaatttcctcc 1275 Score = 99.6 bits (50), Expect = 6e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 362 cggccgcgttccagctcactccgacccgcaccaggtgtgatttggttgtggtggtgaatg 421 |||||| |||||||||||| |||||||| ||||||| |||||||| ||| | ||||||| Sbjct: 528 cggccgtgttccagctcaccccgacccggaccaggttcgatttggtggtgatagtgaatg 587 Query: 422 ggaggaaggagaagatcgcctccggcctgctcaaccccttcgtcgcccacctcaaggccg 481 | ||||||||||||| ||||| |||||||| ||||| ||| | || ||||| |||| || Sbjct: 588 gccggaaggagaagatagcctctggcctgctaaacccgttcctggcacacctgaaggtcg 647 Query: 482 cacaggaccagatcgccaaggg 503 | ||||| ||||| || ||||| Sbjct: 648 cccaggatcagattgcaaaggg 669 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 2339 agaaaacatcagatgccaaggctggaggtcaacttttctatgagccagatgagttgattc 2398 ||||||| ||||||| ||||||||| |||||| ||||||||||| ||||| ||||| | Sbjct: 2478 agaaaacttcagatgggaaggctggaactcaactcttctatgagccggatgaattgatgc 2537 Query: 2399 cagagcgtggatttgaagatgtgtcatttggatatga 2435 |||||||||||| |||||||| |||||||||||||| Sbjct: 2538 cagagcgtggatctgaagatgcttcatttggatatga 2574 Score = 75.8 bits (38), Expect = 9e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 2016 tgatgagcttatgatgtctggggaaggtcggagttttgtgggtggtgacatgaaggagat 2075 |||||| || ||||||||||||||||| | || | | ||| |||||| || |||||||| Sbjct: 2158 tgatgaactgatgatgtctggggaagggggaagatatatggatggtgaaattaaggagat 2217 Query: 2076 agaagctggaggtggaggatacaggagagg 2105 ||||||||| |||||| ||||||||||||| Sbjct: 2218 agaagctggtggtggaagatacaggagagg 2247 Score = 52.0 bits (26), Expect = 0.013 Identities = 95/118 (80%) Strand = Plus / Plus Query: 543 cgcgccatggttcaccaggggcaccatccagaggttcgtccgtttcgtgagcacgccgga 602 |||||||||||| || || |||||| | |||| ||||| || |||||||| || ||||| Sbjct: 709 cgcgccatggtttacaagaggcaccgtggagagattcgtgcgcttcgtgagtactccgga 768 Query: 603 ggtcctggagcgggtcaccaccatcgagtccgagatactgcagctccacgacgccatc 660 ||| || ||||| || || || || || |||||||| |||||||| | ||||||||| Sbjct: 769 ggtgcttgagcgagtgacgacgatagaatccgagatcttgcagctcgaggacgccatc 826 Score = 50.1 bits (25), Expect = 0.052 Identities = 37/41 (90%) Strand = Plus / Plus Query: 2740 aggcttaagcaagagaggcaaaagagaattgctgcaagaag 2780 |||||||| | |||||||||||||||||| || |||||||| Sbjct: 3026 aggcttaaactagagaggcaaaagagaatagccgcaagaag 3066
>dbj|AK107130.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C04, full insert sequence Length = 3008 Score = 176 bits (89), Expect = 3e-40 Identities = 221/265 (83%) Strand = Plus / Plus Query: 839 attcaaaagttcaacttctcagagtgctggagactcgcaagactgtcttacgtaaagagc 898 |||||||||| ||||| || |||||||| || || || || | ||||||| | ||||||| Sbjct: 975 attcaaaagtccaactgctgagagtgcttgaaacccgaaaaaatgtcttaaggaaagagc 1034 Query: 899 aggctatggcctttgcccgtgctgtagctgctggttttgatatagacaacctgctatatt 958 |||| ||||| ||||| |||||||| || ||||| ||||| || ||||| ||| || | Sbjct: 1035 aggccatggcttttgcacgtgctgtggcagctgggtttgacatcgacaatctgggttact 1094 Query: 959 tgatatcgttcgcagagcgttttggtgcttcacgcttgatgaaggcgtgtacacagttca 1018 |||| |||| |||||||| |||||||||||||| ||||||| ||| ||| | ||||||| Sbjct: 1095 tgattgcgtttgcagagcgctttggtgcttcacgtttgatgagggcatgttcgcagttca 1154 Query: 1019 ttgatttgtggaggcaaaaacatgaaactggacagtggattgacgttgaacctgaagcaa 1078 | || |||||| || ||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 1155 tcgaactgtggaagcgaaagcatgaaactggacaatggattgaagttgaaccagaagcaa 1214 Query: 1079 tgtctgcacgctctgaatttcctcc 1103 ||||| ||| ||||||||||||||| Sbjct: 1215 tgtctacacactctgaatttcctcc 1239 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Plus Query: 2339 agaaaacatcagatgccaaggctggaggtcaacttttctatgagccagatgagttgattc 2398 ||||||| ||||||| ||||||||| |||||| ||||||||||| ||||| ||||| | Sbjct: 2439 agaaaacttcagatgggaaggctggaactcaactcttctatgagccggatgaattgatgc 2498 Query: 2399 cagagcgtggatttgaagatgtgtcatttggatatga 2435 |||||||||||| |||||||| |||||||||||||| Sbjct: 2499 cagagcgtggatctgaagatgcttcatttggatatga 2535 Score = 75.8 bits (38), Expect = 9e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 2016 tgatgagcttatgatgtctggggaaggtcggagttttgtgggtggtgacatgaaggagat 2075 |||||| || ||||||||||||||||| | || | | ||| |||||| || |||||||| Sbjct: 2119 tgatgaactgatgatgtctggggaagggggaagatatatggatggtgaaattaaggagat 2178 Query: 2076 agaagctggaggtggaggatacaggagagg 2105 ||||||||| |||||| ||||||||||||| Sbjct: 2179 agaagctggtggtggaagatacaggagagg 2208 Score = 52.0 bits (26), Expect = 0.013 Identities = 95/118 (80%) Strand = Plus / Plus Query: 543 cgcgccatggttcaccaggggcaccatccagaggttcgtccgtttcgtgagcacgccgga 602 |||||||||||| || || |||||| | |||| ||||| || |||||||| || ||||| Sbjct: 594 cgcgccatggtttacaagaggcaccgtggagagattcgtgcgcttcgtgagtactccgga 653 Query: 603 ggtcctggagcgggtcaccaccatcgagtccgagatactgcagctccacgacgccatc 660 ||| || ||||| || || || || || |||||||| |||||||| | ||||||||| Sbjct: 654 ggtgcttgagcgagtgacgacgatagaatccgagatcttgcagctcgaggacgccatc 711 Score = 46.1 bits (23), Expect = 0.81 Identities = 32/35 (91%) Strand = Plus / Plus Query: 362 cggccgcgttccagctcactccgacccgcaccagg 396 |||||| |||||||||||| |||||||| |||||| Sbjct: 504 cggccgtgttccagctcaccccgacccggaccagg 538
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Minus Query: 2339 agaaaacatcagatgccaaggctggaggtcaacttttctatgagccagatgagttgattc 2398 ||||||| ||||||| ||||||||| |||||| ||||||||||| ||||| ||||| | Sbjct: 15152597 agaaaacttcagatgggaaggctggaactcaactcttctatgagccggatgaattgatgc 15152538 Query: 2399 cagagcgtggatttgaagatgtgtcatttggatatga 2435 |||||||||||| |||||||| |||||||||||||| Sbjct: 15152537 cagagcgtggatctgaagatgcttcatttggatatga 15152501 Score = 95.6 bits (48), Expect = 1e-15 Identities = 81/92 (88%) Strand = Plus / Minus Query: 1012 cagttcattgatttgtggaggcaaaaacatgaaactggacagtggattgacgttgaacct 1071 |||||||| || |||||| || ||| |||||||||||||| |||||||| |||||||| Sbjct: 15154253 cagttcatcgaactgtggaagcgaaagcatgaaactggacaatggattgaagttgaacca 15154194 Query: 1072 gaagcaatgtctgcacgctctgaatttcctcc 1103 |||||||||||| ||| ||||||||||||||| Sbjct: 15154193 gaagcaatgtctacacactctgaatttcctcc 15154162 Score = 83.8 bits (42), Expect = 4e-12 Identities = 99/118 (83%) Strand = Plus / Minus Query: 882 tgtcttacgtaaagagcaggctatggcctttgcccgtgctgtagctgctggttttgatat 941 ||||||| | ||||||||||||||||| ||||| |||||||| || ||||| ||||| || Sbjct: 15155239 tgtcttaaggaaagagcaggctatggcttttgcacgtgctgtggcagctgggtttgacat 15155180 Query: 942 agacaacctgctatatttgatatcgttcgcagagcgttttggtgcttcacgcttgatg 999 ||||| ||| || ||||| |||| |||||||| |||||||||||||| |||||| Sbjct: 15155179 cgacaatctgggttacttgattgcgtttgcagagcgctttggtgcttcacgtttgatg 15155122 Score = 75.8 bits (38), Expect = 9e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 2016 tgatgagcttatgatgtctggggaaggtcggagttttgtgggtggtgacatgaaggagat 2075 |||||| || ||||||||||||||||| | || | | ||| |||||| || |||||||| Sbjct: 15152917 tgatgaactgatgatgtctggggaagggggaagatatatggatggtgaaattaaggagat 15152858 Query: 2076 agaagctggaggtggaggatacaggagagg 2105 ||||||||| |||||| ||||||||||||| Sbjct: 15152857 agaagctggtggtggaagatacaggagagg 15152828 Score = 63.9 bits (32), Expect = 3e-06 Identities = 86/104 (82%) Strand = Plus / Minus Query: 400 gatttggttgtggtggtgaatgggaggaaggagaagatcgcctccggcctgctcaacccc 459 |||||||| ||| | |||||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 15156874 gatttggtggtgatagtgaatggccggaaggagaagatagcctctggcctgctaaacccg 15156815 Query: 460 ttcgtcgcccacctcaaggccgcacaggaccagatcgccaaggg 503 ||| | || ||||| |||| ||| ||||| ||||| || ||||| Sbjct: 15156814 ttcctggcacacctgaaggtcgcccaggatcagattgcaaaggg 15156771 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Plus Query: 574 aggttcgtccgtttcgtgagcacgccggaggtcctggag 612 |||||||| || |||||||||||||||||||| |||||| Sbjct: 25328870 aggttcgtgcggttcgtgagcacgccggaggtgctggag 25328908 Score = 50.1 bits (25), Expect = 0.052 Identities = 37/41 (90%) Strand = Plus / Minus Query: 2740 aggcttaagcaagagaggcaaaagagaattgctgcaagaag 2780 |||||||| | |||||||||||||||||| || |||||||| Sbjct: 15151120 aggcttaaactagagaggcaaaagagaatagccgcaagaag 15151080 Score = 50.1 bits (25), Expect = 0.052 Identities = 34/37 (91%) Strand = Plus / Minus Query: 362 cggccgcgttccagctcactccgacccgcaccaggtg 398 |||||| |||||||||||| |||||||| |||||||| Sbjct: 15157366 cggccgtgttccagctcaccccgacccggaccaggtg 15157330
>dbj|AP005444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H01 Length = 165634 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Minus Query: 2339 agaaaacatcagatgccaaggctggaggtcaacttttctatgagccagatgagttgattc 2398 ||||||| ||||||| ||||||||| |||||| ||||||||||| ||||| ||||| | Sbjct: 158501 agaaaacttcagatgggaaggctggaactcaactcttctatgagccggatgaattgatgc 158442 Query: 2399 cagagcgtggatttgaagatgtgtcatttggatatga 2435 |||||||||||| |||||||| |||||||||||||| Sbjct: 158441 cagagcgtggatctgaagatgcttcatttggatatga 158405 Score = 95.6 bits (48), Expect = 1e-15 Identities = 81/92 (88%) Strand = Plus / Minus Query: 1012 cagttcattgatttgtggaggcaaaaacatgaaactggacagtggattgacgttgaacct 1071 |||||||| || |||||| || ||| |||||||||||||| |||||||| |||||||| Sbjct: 160157 cagttcatcgaactgtggaagcgaaagcatgaaactggacaatggattgaagttgaacca 160098 Query: 1072 gaagcaatgtctgcacgctctgaatttcctcc 1103 |||||||||||| ||| ||||||||||||||| Sbjct: 160097 gaagcaatgtctacacactctgaatttcctcc 160066 Score = 83.8 bits (42), Expect = 4e-12 Identities = 99/118 (83%) Strand = Plus / Minus Query: 882 tgtcttacgtaaagagcaggctatggcctttgcccgtgctgtagctgctggttttgatat 941 ||||||| | ||||||||||||||||| ||||| |||||||| || ||||| ||||| || Sbjct: 161143 tgtcttaaggaaagagcaggctatggcttttgcacgtgctgtggcagctgggtttgacat 161084 Query: 942 agacaacctgctatatttgatatcgttcgcagagcgttttggtgcttcacgcttgatg 999 ||||| ||| || ||||| |||| |||||||| |||||||||||||| |||||| Sbjct: 161083 cgacaatctgggttacttgattgcgtttgcagagcgctttggtgcttcacgtttgatg 161026 Score = 75.8 bits (38), Expect = 9e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 2016 tgatgagcttatgatgtctggggaaggtcggagttttgtgggtggtgacatgaaggagat 2075 |||||| || ||||||||||||||||| | || | | ||| |||||| || |||||||| Sbjct: 158821 tgatgaactgatgatgtctggggaagggggaagatatatggatggtgaaattaaggagat 158762 Query: 2076 agaagctggaggtggaggatacaggagagg 2105 ||||||||| |||||| ||||||||||||| Sbjct: 158761 agaagctggtggtggaagatacaggagagg 158732 Score = 63.9 bits (32), Expect = 3e-06 Identities = 86/104 (82%) Strand = Plus / Minus Query: 400 gatttggttgtggtggtgaatgggaggaaggagaagatcgcctccggcctgctcaacccc 459 |||||||| ||| | |||||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 162778 gatttggtggtgatagtgaatggccggaaggagaagatagcctctggcctgctaaacccg 162719 Query: 460 ttcgtcgcccacctcaaggccgcacaggaccagatcgccaaggg 503 ||| | || ||||| |||| ||| ||||| ||||| || ||||| Sbjct: 162718 ttcctggcacacctgaaggtcgcccaggatcagattgcaaaggg 162675 Score = 50.1 bits (25), Expect = 0.052 Identities = 37/41 (90%) Strand = Plus / Minus Query: 2740 aggcttaagcaagagaggcaaaagagaattgctgcaagaag 2780 |||||||| | |||||||||||||||||| || |||||||| Sbjct: 157024 aggcttaaactagagaggcaaaagagaatagccgcaagaag 156984 Score = 50.1 bits (25), Expect = 0.052 Identities = 34/37 (91%) Strand = Plus / Minus Query: 362 cggccgcgttccagctcactccgacccgcaccaggtg 398 |||||| |||||||||||| |||||||| |||||||| Sbjct: 163270 cggccgtgttccagctcaccccgacccggaccaggtg 163234
>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0030H06 Length = 147890 Score = 97.6 bits (49), Expect = 2e-16 Identities = 85/97 (87%) Strand = Plus / Minus Query: 2339 agaaaacatcagatgccaaggctggaggtcaacttttctatgagccagatgagttgattc 2398 ||||||| ||||||| ||||||||| |||||| ||||||||||| ||||| ||||| | Sbjct: 19346 agaaaacttcagatgggaaggctggaactcaactcttctatgagccggatgaattgatgc 19287 Query: 2399 cagagcgtggatttgaagatgtgtcatttggatatga 2435 |||||||||||| |||||||| |||||||||||||| Sbjct: 19286 cagagcgtggatctgaagatgcttcatttggatatga 19250 Score = 95.6 bits (48), Expect = 1e-15 Identities = 81/92 (88%) Strand = Plus / Minus Query: 1012 cagttcattgatttgtggaggcaaaaacatgaaactggacagtggattgacgttgaacct 1071 |||||||| || |||||| || ||| |||||||||||||| |||||||| |||||||| Sbjct: 21002 cagttcatcgaactgtggaagcgaaagcatgaaactggacaatggattgaagttgaacca 20943 Query: 1072 gaagcaatgtctgcacgctctgaatttcctcc 1103 |||||||||||| ||| ||||||||||||||| Sbjct: 20942 gaagcaatgtctacacactctgaatttcctcc 20911 Score = 83.8 bits (42), Expect = 4e-12 Identities = 99/118 (83%) Strand = Plus / Minus Query: 882 tgtcttacgtaaagagcaggctatggcctttgcccgtgctgtagctgctggttttgatat 941 ||||||| | ||||||||||||||||| ||||| |||||||| || ||||| ||||| || Sbjct: 21988 tgtcttaaggaaagagcaggctatggcttttgcacgtgctgtggcagctgggtttgacat 21929 Query: 942 agacaacctgctatatttgatatcgttcgcagagcgttttggtgcttcacgcttgatg 999 ||||| ||| || ||||| |||| |||||||| |||||||||||||| |||||| Sbjct: 21928 cgacaatctgggttacttgattgcgtttgcagagcgctttggtgcttcacgtttgatg 21871 Score = 75.8 bits (38), Expect = 9e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 2016 tgatgagcttatgatgtctggggaaggtcggagttttgtgggtggtgacatgaaggagat 2075 |||||| || ||||||||||||||||| | || | | ||| |||||| || |||||||| Sbjct: 19666 tgatgaactgatgatgtctggggaagggggaagatatatggatggtgaaattaaggagat 19607 Query: 2076 agaagctggaggtggaggatacaggagagg 2105 ||||||||| |||||| ||||||||||||| Sbjct: 19606 agaagctggtggtggaagatacaggagagg 19577 Score = 63.9 bits (32), Expect = 3e-06 Identities = 86/104 (82%) Strand = Plus / Minus Query: 400 gatttggttgtggtggtgaatgggaggaaggagaagatcgcctccggcctgctcaacccc 459 |||||||| ||| | |||||||| ||||||||||||| ||||| |||||||| ||||| Sbjct: 23623 gatttggtggtgatagtgaatggccggaaggagaagatagcctctggcctgctaaacccg 23564 Query: 460 ttcgtcgcccacctcaaggccgcacaggaccagatcgccaaggg 503 ||| | || ||||| |||| ||| ||||| ||||| || ||||| Sbjct: 23563 ttcctggcacacctgaaggtcgcccaggatcagattgcaaaggg 23520 Score = 50.1 bits (25), Expect = 0.052 Identities = 37/41 (90%) Strand = Plus / Minus Query: 2740 aggcttaagcaagagaggcaaaagagaattgctgcaagaag 2780 |||||||| | |||||||||||||||||| || |||||||| Sbjct: 17869 aggcttaaactagagaggcaaaagagaatagccgcaagaag 17829 Score = 50.1 bits (25), Expect = 0.052 Identities = 34/37 (91%) Strand = Plus / Minus Query: 362 cggccgcgttccagctcactccgacccgcaccaggtg 398 |||||| |||||||||||| |||||||| |||||||| Sbjct: 24115 cggccgtgttccagctcaccccgacccggaccaggtg 24079
>ref|NM_001058514.1| Oryza sativa (japonica cultivar-group) Os03g0861200 (Os03g0861200) mRNA, complete cds Length = 1482 Score = 89.7 bits (45), Expect = 6e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 2712 ggaagcggagcagatgaaacggctcgaaaggcttaagcaagagaggcaaaagagaattgc 2771 ||||| ||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 822 ggaagaggaacagattaaacggctggaaaggcttaagcaagagaggcagaagaggattgc 763 Query: 2772 tgcaagaag 2780 ||||||||| Sbjct: 762 tgcaagaag 754
>dbj|AK073260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024I18, full insert sequence Length = 1483 Score = 89.7 bits (45), Expect = 6e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 2712 ggaagcggagcagatgaaacggctcgaaaggcttaagcaagagaggcaaaagagaattgc 2771 ||||| ||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 823 ggaagaggaacagattaaacggctggaaaggcttaagcaagagaggcagaagaggattgc 764 Query: 2772 tgcaagaag 2780 ||||||||| Sbjct: 763 tgcaagaag 755
>ref|NM_001066808.1| Oryza sativa (japonica cultivar-group) Os07g0616000 (Os07g0616000) mRNA, complete cds Length = 4835 Score = 69.9 bits (35), Expect = 6e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 550 tggttcaccaggggcaccatccagaggttcgtccgtttcgtgagcacgccggaggtcctg 609 ||||||| || ||||||| || |||||||||| || |||||||||||||||||||| ||| Sbjct: 544 tggttcagcaagggcaccctcgagaggttcgtgcggttcgtgagcacgccggaggtgctg 603 Query: 610 gag 612 ||| Sbjct: 604 gag 606
>dbj|AK120310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055F14, full insert sequence Length = 4836 Score = 69.9 bits (35), Expect = 6e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 550 tggttcaccaggggcaccatccagaggttcgtccgtttcgtgagcacgccggaggtcctg 609 ||||||| || ||||||| || |||||||||| || |||||||||||||||||||| ||| Sbjct: 545 tggttcagcaagggcaccctcgagaggttcgtgcggttcgtgagcacgccggaggtgctg 604 Query: 610 gag 612 ||| Sbjct: 605 gag 607
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Plus Query: 574 aggttcgtccgtttcgtgagcacgccggaggtcctggag 612 |||||||| || |||||||||||||||||||| |||||| Sbjct: 145541 aggttcgtgcggttcgtgagcacgccggaggtgctggag 145579
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 54.0 bits (27), Expect = 0.003 Identities = 36/39 (92%) Strand = Plus / Plus Query: 574 aggttcgtccgtttcgtgagcacgccggaggtcctggag 612 |||||||| || |||||||||||||||||||| |||||| Sbjct: 21960 aggttcgtgcggttcgtgagcacgccggaggtgctggag 21998
>gb|AC016763.8| Homo sapiens BAC clone RP11-548K3 from 2, complete sequence Length = 143283 Score = 50.1 bits (25), Expect = 0.052 Identities = 28/29 (96%) Strand = Plus / Minus Query: 411 ggtggtgaatgggaggaaggagaagatcg 439 ||||| ||||||||||||||||||||||| Sbjct: 2949 ggtggagaatgggaggaaggagaagatcg 2921
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Minus Query: 2734 ctcgaaaggcttaagcaagagaggcaaa 2761 |||||||||||||||||| ||||||||| Sbjct: 2583554 ctcgaaaggcttaagcaacagaggcaaa 2583527
>gb|AC013434.8|AC013434 Homo sapiens chromosome 7 clone RP11-192D18, complete sequence Length = 149103 Score = 48.1 bits (24), Expect = 0.20 Identities = 27/28 (96%) Strand = Plus / Minus Query: 176 atttctcttccgcaaacttgttgaattt 203 ||||||||||| |||||||||||||||| Sbjct: 70390 atttctcttcctcaaacttgttgaattt 70363
>ref|NM_123697.1| Arabidopsis thaliana unknown protein (AT5G43310) mRNA, complete cds Length = 3858 Score = 46.1 bits (23), Expect = 0.81 Identities = 32/35 (91%) Strand = Plus / Plus Query: 904 atggcctttgcccgtgctgtagctgctggttttga 938 ||||||||||| |||||||| || ||||||||||| Sbjct: 742 atggcctttgcacgtgctgtggcagctggttttga 776
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Plus Query: 520 ctccagcccgatccgggtgccga 542 ||||||||||||||||||||||| Sbjct: 699959 ctccagcccgatccgggtgccga 699981
>ref|XM_500347.1| Yarrowia lipolytica CLIB122, YALI0B00528g predicted mRNA Length = 2781 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Plus Query: 319 acggcgacggcgacggcgatgag 341 ||||||||||||||||||||||| Sbjct: 86 acggcgacggcgacggcgatgag 108
>gb|AC100208.16| Mus musculus chromosome 7, clone RP23-59J14, complete sequence Length = 280763 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1745 ctaatgggcatcaagatggagat 1767 ||||||||||||||||||||||| Sbjct: 25622 ctaatgggcatcaagatggagat 25600
>gb|AC129300.3| Mus musculus BAC clone RP24-427A8 from chromosome 7, complete sequence Length = 155123 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1745 ctaatgggcatcaagatggagat 1767 ||||||||||||||||||||||| Sbjct: 56264 ctaatgggcatcaagatggagat 56286
>gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, complete sequence Length = 229964 Score = 46.1 bits (23), Expect = 0.81 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1348 acagatgatcccaggtacaaccactcagaaa 1378 ||||||||||||||| ||| ||||||||||| Sbjct: 130861 acagatgatcccagggacagccactcagaaa 130891
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 46.1 bits (23), Expect = 0.81 Identities = 29/31 (93%) Strand = Plus / Minus Query: 307 tgaaccccacccacggcgacggcgacggcga 337 |||| ||||||| |||||||||||||||||| Sbjct: 2677212 tgaagcccaccctcggcgacggcgacggcga 2677182 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 acggcgacggcgacggcgatga 340 |||||||||||||||||||||| Sbjct: 10572682 acggcgacggcgacggcgatga 10572703
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Plus Query: 319 acggcgacggcgacggcgatgag 341 ||||||||||||||||||||||| Sbjct: 7048138 acggcgacggcgacggcgatgag 7048160 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 cggcgacggcgacggcgatgagg 342 ||||||||||||||||||||||| Sbjct: 23915511 cggcgacggcgacggcgatgagg 23915489
>emb|AL928596.5| Human DNA sequence from clone RP11-1037J10 on chromosome X, complete sequence Length = 64394 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1680 aaagaaaaaagggggcaagaaaa 1702 ||||||||||||||||||||||| Sbjct: 36633 aaagaaaaaagggggcaagaaaa 36611
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Plus Query: 319 acggcgacggcgacggcgatgag 341 ||||||||||||||||||||||| Sbjct: 35718 acggcgacggcgacggcgatgag 35740
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 cggcgacggcgacggcgatgagg 342 ||||||||||||||||||||||| Sbjct: 61915 cggcgacggcgacggcgatgagg 61893
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 cggcgacggcgacggcgatgagg 342 ||||||||||||||||||||||| Sbjct: 30033 cggcgacggcgacggcgatgagg 30011
>dbj|AB017070.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNL12 Length = 45911 Score = 46.1 bits (23), Expect = 0.81 Identities = 32/35 (91%) Strand = Plus / Minus Query: 904 atggcctttgcccgtgctgtagctgctggttttga 938 ||||||||||| |||||||| || ||||||||||| Sbjct: 44544 atggcctttgcacgtgctgtggcagctggttttga 44510
>emb|BX663519.12| Zebrafish DNA sequence from clone DKEY-182M1 in linkage group 15, complete sequence Length = 164720 Score = 46.1 bits (23), Expect = 0.81 Identities = 26/27 (96%) Strand = Plus / Minus Query: 188 caaacttgttgaattttctttcttctt 214 |||||||||| |||||||||||||||| Sbjct: 7243 caaacttgttaaattttctttcttctt 7217
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 46.1 bits (23), Expect = 0.81 Identities = 29/31 (93%) Strand = Plus / Minus Query: 307 tgaaccccacccacggcgacggcgacggcga 337 |||| ||||||| |||||||||||||||||| Sbjct: 46138 tgaagcccaccctcggcgacggcgacggcga 46108
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.81 Identities = 23/23 (100%) Strand = Plus / Minus Query: 319 acggcgacggcgacggcgatgag 341 ||||||||||||||||||||||| Sbjct: 48427 acggcgacggcgacggcgatgag 48405
>gb|AC183773.2| Pan troglodytes BAC clone CH251-2N7 from chromosome 7, complete sequence Length = 168126 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1681 aagaaaaaagggggcaagaaaa 1702 |||||||||||||||||||||| Sbjct: 17149 aagaaaaaagggggcaagaaaa 17128
>gb|AC183385.3| Pan troglodytes BAC clone CH251-277F20 from chromosome 7, complete sequence Length = 148939 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1681 aagaaaaaagggggcaagaaaa 1702 |||||||||||||||||||||| Sbjct: 144507 aagaaaaaagggggcaagaaaa 144486
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 gaaccccacccacggcgacggc 329 |||||||||||||||||||||| Sbjct: 3290513 gaaccccacccacggcgacggc 3290534
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 44.1 bits (22), Expect = 3.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 825 agtacacgaggagcattcaaaagttc 850 |||||||||||||||||||| ||||| Sbjct: 205455 agtacacgaggagcattcaagagttc 205430
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 316 cccacggcgacggcgacggcga 337 |||||||||||||||||||||| Sbjct: 740551 cccacggcgacggcgacggcga 740530
>gb|AC131794.3| Mus musculus BAC clone RP24-486P14 from chromosome 9, complete sequence Length = 166272 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3084 acataatctacacattgtatta 3105 |||||||||||||||||||||| Sbjct: 144129 acataatctacacattgtatta 144108
>gb|AC092648.3| Homo sapiens BAC clone RP11-421N10 from 7, complete sequence Length = 171881 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1681 aagaaaaaagggggcaagaaaa 1702 |||||||||||||||||||||| Sbjct: 86697 aagaaaaaagggggcaagaaaa 86718
>gb|AC153012.4| Mus musculus BAC clone RP23-302F19 from chromosome 9, complete sequence Length = 196764 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3084 acataatctacacattgtatta 3105 |||||||||||||||||||||| Sbjct: 112894 acataatctacacattgtatta 112873
>gb|AC100852.2| Homo sapiens chromosome 17, clone RP11-125C16, complete sequence Length = 157980 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2499 tgcagaggatttatctgtttgc 2520 |||||||||||||||||||||| Sbjct: 114754 tgcagaggatttatctgtttgc 114733
>ref|XM_566495.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA00700) partial mRNA Length = 1556 Score = 44.1 bits (22), Expect = 3.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 825 agtacacgaggagcattcaaaagttc 850 |||||||||||||||||||| ||||| Sbjct: 439 agtacacgaggagcattcaagagttc 464
>gb|AC067745.7| Homo sapiens chromosome 10 clone RP11-417C21, complete sequence Length = 156140 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2053 gtgggtggtgacatgaaggaga 2074 |||||||||||||||||||||| Sbjct: 136835 gtgggtggtgacatgaaggaga 136814
>gb|AC166003.3| Nomascus leucogenys leucogenys clone CH271-85O19, complete sequence Length = 164417 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1885 aaagagaacacaagaaatatgg 1906 |||||||||||||||||||||| Sbjct: 16934 aaagagaacacaagaaatatgg 16955
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 acggcgacggcgacggcgatga 340 |||||||||||||||||||||| Sbjct: 3602633 acggcgacggcgacggcgatga 3602612
>emb|AL450328.6| Human DNA sequence from clone RP11-193H22 on chromosome 6, complete sequence Length = 119389 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 ctttcttcttgcttctcccaaa 226 |||||||||||||||||||||| Sbjct: 32220 ctttcttcttgcttctcccaaa 32241
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 917 gtgctgtagctgctggttttga 938 |||||||||||||||||||||| Sbjct: 2547697 gtgctgtagctgctggttttga 2547718
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15, complete sequence Length = 130618 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 319 acggcgacggcgacggcgatga 340 |||||||||||||||||||||| Sbjct: 68917 acggcgacggcgacggcgatga 68896
>gb|AC005070.1|AC005070 Homo sapiens BAC clone CTB-152G17 from 7q22-q31.1, complete sequence Length = 113033 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 197 tgaattttctttcttcttgctt 218 |||||||||||||||||||||| Sbjct: 111869 tgaattttctttcttcttgctt 111848
>gb|DQ316259.1| Homo sapiens nemo like kinase (NLK) gene, complete cds Length = 158034 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2499 tgcagaggatttatctgtttgc 2520 |||||||||||||||||||||| Sbjct: 108447 tgcagaggatttatctgtttgc 108426
>gb|AC157478.3| Mus musculus BAC clone RP23-33K19 from chromosome 15, complete sequence Length = 229783 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1624 agtgatgattcacacagaaaat 1645 |||||||||||||||||||||| Sbjct: 72293 agtgatgattcacacagaaaat 72272
>emb|AL772421.5|CNS08C9Z Oryza sativa chromosome 12, . BAC OJ1007_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130672 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 acggcgacggcgacggcgatga 340 |||||||||||||||||||||| Sbjct: 98488 acggcgacggcgacggcgatga 98509
>emb|AL772419.4|CNS08C9X Oryza sativa chromosome 12, . BAC OJ1115_G02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 112916 Score = 44.1 bits (22), Expect = 3.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 319 acggcgacggcgacggcgatga 340 |||||||||||||||||||||| Sbjct: 35985 acggcgacggcgacggcgatga 36006 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 604,682,881 Number of extensions: 34175729 Number of successful extensions: 205404 Number of sequences better than 10.0: 56 Number of HSP's gapped: 205386 Number of HSP's successfully gapped: 141 Length of query: 3291 Length of database: 18,610,659,111 Length adjustment: 24 Effective length of query: 3267 Effective length of database: 18,499,340,271 Effective search space: 60437344665357 Effective search space used: 60437344665357 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
