ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf17m08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P21877:ACSA1_ACEXY Cellulose synthase 1 [Includes: Cellulose syn... 30 9.3

>P21877:ACSA1_ACEXY Cellulose synthase 1 [Includes: Cellulose synthase catalytic domain|
           [UDP-forming] - Acetobacter xylinus (Gluconacetobacter
           xylinus)
          Length = 1550
 Score = 30.0 bits (66), Expect = 9.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 169 PASKVMNHIIQDGGIATYAVYAAPCGA 249
           P  KV  HI+ DG    +A +AA CGA
Sbjct: 178 PPEKVRVHILDDGRRPEFAAFAAECGA 204


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 101,067,978
Number of extensions: 1888026
Number of successful extensions: 3731
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3730
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 130
Effective length of database: 70,513,989
Effective search space: 9166818570
Effective search space used: 9166818570
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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