>Q08601:MCA1_YEAST Metacaspase-1 precursor - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 453
 Score =  185 bits (469), Expect = 4e-46
 Identities = 106/279 (37%), Positives = 155/279 (55%), Gaps = 42/279 (15%)
 Frame = +2

Query: 314  GRKRAVICGISYRFSRHELKGCINDAKCMRHLLTTRFRFPDDSIIMLTEEQTDPYKIPTK 493
            GR++A+I GI+Y  S+++L+GCINDA  + + LT  + +  D I++LT++Q D  ++PT+
Sbjct: 155  GRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTR 214

Query: 494  HNIRMAMYWLLQGCQPGDSLVFHYSGHGAQQRSYSGDEVDGMDETLCPLDFETQGMIVDD 673
             N+  AM WL++  QP DSL  HYSGHG Q     GDE DGMD+ + P+DFETQG I+DD
Sbjct: 215  ANMIRAMQWLVKDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIIDD 274

Query: 674  EINAALVRPLPHGAKLHALIDACHSGTALDLPFLCRMSRTG----QYVWED--------- 814
            E++  +V+PL  G +L AL D+CHSGT LDLP+    S  G      +W+D         
Sbjct: 275  EMHDIMVKPLQQGVRLTALFDSCHSGTVLDLPY--TYSTKGIIKEPNIWKDVGQDGLQAA 332

Query: 815  ------HRPR-----SGVWKGTSGG------------------EAISFSGCDDNQTSADT 907
                  +R         ++K   GG                  + +  SG  DNQTSAD 
Sbjct: 333  ISYATGNRAALIGSLGSIFKTVKGGMGNNVDRERVRQIKFSAADVVMLSGSKDNQTSAD- 391

Query: 908  SALSKITSTGAMTFCFIQAIEQGQATTYGSILNSMRSTI 1024
             A+    +TGAM+  FI+ +      +Y S+L +MR  +
Sbjct: 392  -AVEDGQNTGAMSHAFIKVMTLQPQQSYLSLLQNMRKEL 429

>P38119:UPPS_MYCLE Undecaprenyl pyrophosphate synthetase - Mycobacterium leprae|
          Length = 296

 Score = 36.6 bits (83), Expect = 0.24
 Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
 Frame = -1

Query: 844 SFPDTRSWSVIFPYVLPS--------PAHSAEKWQIKCSSTVASIYECMKLSSMGKWSNK 689
           +FPD  +W V+FP + PS        P H+++    + S+     +  + +   G+W+N+
Sbjct: 25  TFPDKSTWPVVFPMLPPSPDGGPRRPPQHTSKAVAPRLSAAQLPTHVAIVMDGNGRWANQ 84

Query: 688 RSIY 677
           R ++
Sbjct: 85  RGLH 88

>Q7MV04:AROC_PORGI Chorismate synthase - Porphyromonas gingivalis (Bacteroides|
            gingivalis)
          Length = 368

 Score = 34.7 bits (78), Expect = 0.92
 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
 Frame = +2

Query: 707  HGAKLHALIDACHSGTALDLPFLCR---MSRTGQYVWEDHRPR-------SGVWKGTSGG 856
            HG  +  +ID C +G  +D+  + R     R GQ  +   R         SG+++G + G
Sbjct: 17   HGKAIGGVIDGCPAGLFVDMETIERELLRRRPGQSHYTSPRQESDMVQFISGLFRGETTG 76

Query: 857  EAISFSGCDDNQTSADTSALSKITSTGAMTFCFIQAIEQGQATTYGSILNSMRST 1021
              I+F   + +  SAD  +LS I   G   + +    + G   T G   +S R T
Sbjct: 77   APIAFMIDNKDVRSADYDSLSSIFRPGHADYTYFH--KYGIRDTRGGGRSSARET 129

>Q72DN5:AROC_DESVH Chorismate synthase - Desulfovibrio vulgaris (strain Hildenborough|
           / ATCC 29579 / NCIMB 8303)
          Length = 354

 Score = 34.3 bits (77), Expect = 1.2
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
 Frame = +2

Query: 707 HGAKLHALIDACHSGTALDLPFLCR----------MSRTGQYVWEDHRPRSGVWKGTSGG 856
           HGA L  +ID C +G ALD   + R           + T +   +  R  SGV++G + G
Sbjct: 19  HGAGLGGVIDGCPAGIALDEAVIQRELDLRRPGGNSASTTRQEPDRVRLLSGVFEGVTTG 78

Query: 857 EAISFSGCDDNQTSADTSALSKITSTGAMTFCF 955
             I+F   + +Q S D   ++++   G   F +
Sbjct: 79  TPIAFHVENVDQRSRDYGEIARLYRPGHADFTY 111

>Q9NSV0:PRR8_HUMAN Proline-rich protein 8 - Homo sapiens (Human)|
          Length = 439

 Score = 33.9 bits (76), Expect = 1.6
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +1

Query: 379 HQRRQVHAPPPHHPLQ-VPRRLHHHAHRRTN*P 474
           HQ    H PPP HP Q  P+  HHH H   + P
Sbjct: 57  HQPPPQHQPPPQHPPQHPPQHQHHHHHHHLSVP 89

>Q64PP7:AROC_BACFR Chorismate synthase - Bacteroides fragilis|
          Length = 358

 Score = 32.3 bits (72), Expect = 4.6
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 10/116 (8%)
 Frame = +2

Query: 707  HGAKLHALIDACHSGTALDLPFL---CRMSRTGQYVWEDHRPR-------SGVWKGTSGG 856
            HG  +  +ID   +G  +D  F+       R GQ V    R         SG+++G S G
Sbjct: 18   HGKGIGGVIDGFPAGIVIDEEFVQQELNRRRPGQSVITTSRKEADKVEFLSGIFEGKSTG 77

Query: 857  EAISFSGCDDNQTSADTSALSKITSTGAMTFCFIQAIEQGQATTYGSILNSMRSTI 1024
              I F   ++NQ S D + L K+       + +   ++ G     G   +S R TI
Sbjct: 78   CPIGFIVWNENQHSNDYNNLEKVYRPSHADYTY--TVKYGIRDHRGGGRSSARETI 131

>P31618:Y17K_TYDVA Hypothetical 16.7 kDa protein - Tobacco yellow dwarf virus (strain|
           Australia) (TYDV)
          Length = 146

 Score = 32.0 bits (71), Expect = 6.0
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +2

Query: 746 SGTALDLPFLCRMSRTGQYVWEDHRPRSGVWKGTSGGEAISFSGCDDNQT 895
           +GT +   ++C  SRTG+  W     R   W GT     I F+  DD+ T
Sbjct: 14  AGTRIPSLYICGPSRTGKTTWARSLGRHNYWNGT-----IDFTVYDDHAT 58

>Q5L9G0:AROC_BACFN Chorismate synthase - Bacteroides fragilis (strain ATCC 25285 / NCTC|
            9343)
          Length = 358

 Score = 32.0 bits (71), Expect = 6.0
 Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
 Frame = +2

Query: 707  HGAKLHALIDACHSGTALDLPFLCR---MSRTGQYVWEDHRPR-------SGVWKGTSGG 856
            HG  +  +ID   +G  +D  F+ +     R GQ V    R         SG+++G S G
Sbjct: 18   HGKGIGGVIDGFPAGIVIDEEFVQQELSRRRPGQSVITTSRKEADKVEFLSGIFEGKSTG 77

Query: 857  EAISFSGCDDNQTSADTSALSKITSTGAMTFCFIQAIEQGQATTYGSILNSMRSTI 1024
              I F   ++NQ S D + L K+       + +   ++ G     G   +S R TI
Sbjct: 78   CPIGFIVWNENQHSNDYNNLEKVYRPSHADYTY--TVKYGIRDHRGGGRSSARETI 131

>Q9SJY7:AGP2_ARATH Classical arabinogalactan protein 2 precursor - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 131

 Score = 32.0 bits (71), Expect = 6.0
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -2

Query: 1176 GFAYTSNVSHAVS-CGSCLNPPVLALPPVRSIEMSDVTAPPPAIEAPLP 1033
            GF  TS ++ A +   + + PP  ALPPV +   S + +PP  +  P P
Sbjct: 13   GFLATSCLAQAPAPAPTTVTPPPTALPPVTAETPSPIASPPVPVNEPTP 61

>Q7M841:AROC_WOLSU Chorismate synthase - Wolinella succinogenes|
          Length = 360

 Score = 31.6 bits (70), Expect = 7.8
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
 Frame = +2

Query: 707 HGAKLHALIDACHSGTALDLPFL---CRMSRTGQYVWEDHRPRS-------GVWKGTSGG 856
           HGA +  ++D   +G  +D  FL       R GQ ++   R  S       GV +G + G
Sbjct: 17  HGAGIGCVLDGVPAGLRVDEEFLNLELSRRRPGQSLYSTPRKESDRVEILSGVMEGFTTG 76

Query: 857 EAISFSGCDDNQTSADTSALSKITSTGAMTFCF 955
             ++    ++NQ S+D  ++  I   G   F +
Sbjct: 77  TPLAMFIPNENQKSSDYESIRSIFRPGHADFTY 109


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 206,194,162
Number of extensions: 4330258
Number of successful extensions: 12214
Number of sequences better than 10.0: 10
Number of HSP's gapped: 12171
Number of HSP's successfully gapped: 11
Length of query: 441
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 325
Effective length of database: 68,868,219
Effective search space: 22382171175
Effective search space used: 22382171175
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)