>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic|
           7S globulin high-kDa subunit; Basic 7S globulin low-kDa
           subunit]
          Length = 427

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
 Frame = -2

Query: 443 SLGAFDTCFNTDEVAAGGAPAVTIHMD--GGVDLALPMENTLIHSSATPLACLAMAEAPX 270
           S+  F  CFN++++ A   P+V + MD   G    +  E+ ++ +    + CL +     
Sbjct: 321 SVAPFGLCFNSNKINA--YPSVDLVMDKPNGPVWRISGEDLMVQAQPG-VTCLGVMNGGM 377

Query: 269 XXXXXXXXXXXXXXXNLRIVFDVANSRVGFARES 168
                          NL +VFD+A SRVGF+  S
Sbjct: 378 QPRAEITLGARQLEENL-VVFDLARSRVGFSTSS 410

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
 Frame = +1

Query: 172  SRAKPTRELATSKTIRRFCC---CRLATTLTTELTFCGASAMARHASGVALLWISVFSMG 342
            S+ +P   +AT  TI           +T LTT+ T   A++                SM 
Sbjct: 3052 SQNRPPHPMATMSTIHPSSTPETTHTSTVLTTKATTTRATS----------------SMS 3095

Query: 343  SARSTPPSMWIVTAGAPPAATSSVLKH 423
            +  STP + WI+T     A T++ L H
Sbjct: 3096 TPSSTPGTTWILTELTTAATTTAALPH 3122

>TAF4_DROME (P47825) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 110 kDa subunit)
           (p110) (TAFII-110) (110 kDa TBP-associated factor)
          Length = 921

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 358 PPSMWIVTAGAPPAATSSVLKHVSNAPSDVYP 453
           PPS+  ++ G PP  T SVL  +++A +   P
Sbjct: 527 PPSLAAISGGPPPTPTLSVLSTLNSASTTTLP 558

>FUT3_BOVIN (Q11126) Galactoside 3(4)-L-fucosyltransferase (EC 2.4.1.65) (Blood|
           group Lewis alpha-4-fucosyltransferase) (Lewis FT)
           (Fucosyltransferase 3) (FUCT-III) (FUTB)
          Length = 365

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 307 VALLWISVFSMGSARSTPPSMWIVTAGAPPAATSSVLKHV 426
           +AL + S   M   +  P  MW+   GAP  AT     H+
Sbjct: 26  LALCFFSYLRMSQEKPKPKPMWVSELGAPSQATEGSSAHL 65

>PALY_RHOTO (P11544) Phenylalanine ammonia-lyase (EC 4.3.1.5)|
          Length = 716

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -3

Query: 190 ASASPGSPATSFLSHRTTFLHAFAQ 116
           ++AS  SPA S+LS RT  L+AF +
Sbjct: 646 SAASTSSPALSYLSPRTQILYAFVR 670

>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:|
           Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin
           2 low-kDa subunit]
          Length = 433

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
 Frame = -2

Query: 443 SLGAFDTCFNTDEVAAGGAPAVTIHMD--GGVDLALPMENTLIHSSATPLACLAMAEAPX 270
           S+  F  CFN++++ A   P+V + MD   G    +  E+ ++ +    + CL +     
Sbjct: 327 SVAPFGLCFNSNKINA--YPSVDLVMDKPNGPVWRISGEDLMVQAQPG-VTCLGVMNGGM 383

Query: 269 XXXXXXXXXXXXXXXNLRIVFDVANSRVGFARES 168
                           L +VFD+A SRVGF+  S
Sbjct: 384 QPRAEVTLGTRQLEEKL-MVFDLARSRVGFSTSS 416

>CDC16_SCHPO (P36618) Cell division control protein 16|
          Length = 299

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 340 GSARSTPPSMWIVTAGAPPAATSSVLKHVSNAPS 441
           G   ST P +W V   APP      +++V   PS
Sbjct: 41  GGNSSTRPYVWAVLLNAPPRNADEYIRYVRQGPS 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,480,312
Number of Sequences: 219361
Number of extensions: 686502
Number of successful extensions: 2194
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2193
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)