| Clone Name | rbast79e07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ROBO1_MOUSE (O89026) Roundabout homolog 1 precursor | 28 | 8.7 | 2 | ROBO1_RAT (O55005) Roundabout homolog 1 precursor | 28 | 8.7 | 3 | ROBO1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1) (... | 28 | 8.7 |
|---|
>ROBO1_MOUSE (O89026) Roundabout homolog 1 precursor| Length = 1612 Score = 27.7 bits (60), Expect = 8.7 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = +3 Query: 72 KKNGQLAVDKVYRLKINKGWLMSTHTRKS 158 KK+G DK R+ I G LM T+TRKS Sbjct: 166 KKDGSPLDDKDERITIRGGKLMITYTRKS 194
>ROBO1_RAT (O55005) Roundabout homolog 1 precursor| Length = 1651 Score = 27.7 bits (60), Expect = 8.7 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = +3 Query: 72 KKNGQLAVDKVYRLKINKGWLMSTHTRKS 158 KK+G DK R+ I G LM T+TRKS Sbjct: 205 KKDGSPLDDKDERITIRGGKLMITYTRKS 233
>ROBO1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1) (Deleted in U| twenty twenty) Length = 1651 Score = 27.7 bits (60), Expect = 8.7 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = +3 Query: 72 KKNGQLAVDKVYRLKINKGWLMSTHTRKS 158 KK+G DK R+ I G LM T+TRKS Sbjct: 205 KKDGSPLDDKDERITIRGGKLMITYTRKS 233 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,953,743 Number of Sequences: 219361 Number of extensions: 423000 Number of successful extensions: 994 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 981 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 994 length of database: 80,573,946 effective HSP length: 38 effective length of database: 72,238,228 effective search space used: 1733717472 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)