ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast79e03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 311 gccgccgactccttcttgtccttgaagaacccgaacaccggccgcgagcagaccggaacg 370 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 27634887 gccgccgcgtccttcttgtccttgaagaacccgaacaccggccgcgagcacaccggcacg 27634946 Query: 371 ttgagcaccacgggcgccacgcgcacgccgg 401 || |||||||| ||||||||||| ||||||| Sbjct: 27634947 ttcagcaccaccggcgccacgcggacgccgg 27634977 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 aacagtcaattgattagaccttc 30 ||||||||||||||||||||||| Sbjct: 27634611 aacagtcaattgattagaccttc 27634633 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgccgccgtcggcgtcggcgtc 247 |||||||||||||||||||||| Sbjct: 21409375 cgccgccgtcggcgtcggcgtc 21409396 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 ctgcgccgccgtcggcgtcggcgtc 247 |||||||| |||||||||||||||| Sbjct: 28453206 ctgcgccggcgtcggcgtcggcgtc 28453182 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 aaagaacaaaccaaatcagttaaaa 72 ||||||||||| ||||||||||||| Sbjct: 27634648 aaagaacaaacaaaatcagttaaaa 27634672
>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0778G11 Length = 59211 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 311 gccgccgactccttcttgtccttgaagaacccgaacaccggccgcgagcagaccggaacg 370 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 39070 gccgccgcgtccttcttgtccttgaagaacccgaacaccggccgcgagcacaccggcacg 39129 Query: 371 ttgagcaccacgggcgccacgcgcacgccgg 401 || |||||||| ||||||||||| ||||||| Sbjct: 39130 ttcagcaccaccggcgccacgcggacgccgg 39160 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 aacagtcaattgattagaccttc 30 ||||||||||||||||||||||| Sbjct: 38794 aacagtcaattgattagaccttc 38816 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 aaagaacaaaccaaatcagttaaaa 72 ||||||||||| ||||||||||||| Sbjct: 38831 aaagaacaaacaaaatcagttaaaa 38855
>dbj|AK109610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G02, full insert sequence Length = 1936 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 311 gccgccgactccttcttgtccttgaagaacccgaacaccggccgcgagcagaccggaacg 370 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 84 gccgccgcgtccttcttgtccttgaagaacccgaacaccggccgcgagcacaccggcacg 143 Query: 371 ttgagcaccacgggcgccacgcgcacgccgg 401 || |||||||| ||||||||||| ||||||| Sbjct: 144 ttcagcaccaccggcgccacgcggacgccgg 174
>dbj|AK102712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033104O20, full insert sequence Length = 1562 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 311 gccgccgactccttcttgtccttgaagaacccgaacaccggccgcgagcagaccggaacg 370 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 1277 gccgccgcgtccttcttgtccttgaagaacccgaacaccggccgcgagcacaccggcacg 1218 Query: 371 ttgagcaccacgggcgccacgcgcacgccgg 401 || |||||||| ||||||||||| ||||||| Sbjct: 1217 ttcagcaccaccggcgccacgcggacgccgg 1187 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Minus Query: 8 aacagtcaattgattagaccttc 30 ||||||||||||||||||||||| Sbjct: 1553 aacagtcaattgattagaccttc 1531 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 aaagaacaaaccaaatcagttaaaa 72 ||||||||||| ||||||||||||| Sbjct: 1516 aaagaacaaacaaaatcagttaaaa 1492
>dbj|AK060681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D12, full insert sequence Length = 1645 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Minus Query: 311 gccgccgactccttcttgtccttgaagaacccgaacaccggccgcgagcagaccggaacg 370 ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 1276 gccgccgcgtccttcttgtccttgaagaacccgaacaccggccgcgagcacaccggcacg 1217 Query: 371 ttgagcaccacgggcgccacgcgcacgccgg 401 || |||||||| ||||||||||| ||||||| Sbjct: 1216 ttcagcaccaccggcgccacgcggacgccgg 1186 Score = 46.1 bits (23), Expect = 0.087 Identities = 23/23 (100%) Strand = Plus / Minus Query: 8 aacagtcaattgattagaccttc 30 ||||||||||||||||||||||| Sbjct: 1552 aacagtcaattgattagaccttc 1530 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 48 aaagaacaaaccaaatcagttaaaa 72 ||||||||||| ||||||||||||| Sbjct: 1515 aaagaacaaacaaaatcagttaaaa 1491
>ref|XM_464229.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1735 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 311 gccgccgactccttcttgtccttgaagaacccgaacaccggccgcgagcagaccggaacg 370 ||||||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1240 gccgccgcgtccttcctgtccttgaagaacccgaacaccgggcgcgagcagaccggcacg 1181 Query: 371 ttgagcaccacggg 384 |||||||| ||||| Sbjct: 1180 ttgagcacgacggg 1167
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 311 gccgccgactccttcttgtccttgaagaacccgaacaccggccgcgagcagaccggaacg 370 ||||||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 3542170 gccgccgcgtccttcctgtccttgaagaacccgaacaccgggcgcgagcagaccggcacg 3542111 Query: 371 ttgagcaccacggg 384 |||||||| ||||| Sbjct: 3542110 ttgagcacgacggg 3542097
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 311 gccgccgactccttcttgtccttgaagaacccgaacaccggccgcgagcagaccggaacg 370 ||||||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 86965 gccgccgcgtccttcctgtccttgaagaacccgaacaccgggcgcgagcagaccggcacg 86906 Query: 371 ttgagcaccacggg 384 |||||||| ||||| Sbjct: 86905 ttgagcacgacggg 86892
>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0085K21 Length = 180714 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 311 gccgccgactccttcttgtccttgaagaacccgaacaccggccgcgagcagaccggaacg 370 ||||||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 23460 gccgccgcgtccttcctgtccttgaagaacccgaacaccgggcgcgagcagaccggcacg 23401 Query: 371 ttgagcaccacggg 384 |||||||| ||||| Sbjct: 23400 ttgagcacgacggg 23387
>dbj|AK060547.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G04, full insert sequence Length = 1734 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 311 gccgccgactccttcttgtccttgaagaacccgaacaccggccgcgagcagaccggaacg 370 ||||||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1240 gccgccgcgtccttcctgtccttgaagaacccgaacaccgggcgcgagcagaccggcacg 1181 Query: 371 ttgagcaccacggg 384 |||||||| ||||| Sbjct: 1180 ttgagcacgacggg 1167
>ref|XM_468648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1245 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cgccgccgtcggcgtcggcgtc 247 |||||||||||||||||||||| Sbjct: 133 cgccgccgtcggcgtcggcgtc 112
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 225 gcgccgccgtcggcgtcggcgt 246 |||||||||||||||||||||| Sbjct: 58503 gcgccgccgtcggcgtcggcgt 58482
>gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C05 map C12819S, complete sequence Length = 113266 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgccgccgtcggcgtcggcgtc 247 |||||||||||||||||||||| Sbjct: 61187 cgccgccgtcggcgtcggcgtc 61208
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgccgccgtcggcgtcggcgtc 247 |||||||||||||||||||||| Sbjct: 16823337 cgccgccgtcggcgtcggcgtc 16823358 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 222 gctgcgccgccgtcggcgtcggcgtctgct 251 |||||| || |||||||||||||||||||| Sbjct: 1437649 gctgcggcggcgtcggcgtcggcgtctgct 1437620 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 ccgctgcgccgccgtcggcgtcggc 244 ||||| ||||||||||||||||||| Sbjct: 35515378 ccgctccgccgccgtcggcgtcggc 35515354 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccgtcggcgtcggcgtctgc 250 |||||||||||||||||||| Sbjct: 29108961 ccgtcggcgtcggcgtctgc 29108980 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 accgctgcgccgccgtcggc 238 |||||||||||||||||||| Sbjct: 24690342 accgctgcgccgccgtcggc 24690323
>gb|AY302059.1| Oryza sativa (japonica cultivar-group) zinc transporter (ZIP2) mRNA, complete cds Length = 1298 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cgccgccgtcggcgtcggcgtc 247 |||||||||||||||||||||| Sbjct: 164 cgccgccgtcggcgtcggcgtc 143
>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11, from chromosome 3, complete sequence Length = 147806 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 222 gctgcgccgccgtcggcgtcggcgtctgct 251 |||||| || |||||||||||||||||||| Sbjct: 99152 gctgcggcggcgtcggcgtcggcgtctgct 99123
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 225 gcgccgccgtcggcgtcggcgt 246 |||||||||||||||||||||| Sbjct: 21712483 gcgccgccgtcggcgtcggcgt 21712462
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgccgccgtcggcgtcggcgtc 247 |||||||||||||||||||||| Sbjct: 16816970 cgccgccgtcggcgtcggcgtc 16816991 Score = 44.1 bits (22), Expect = 0.34 Identities = 28/30 (93%) Strand = Plus / Minus Query: 222 gctgcgccgccgtcggcgtcggcgtctgct 251 |||||| || |||||||||||||||||||| Sbjct: 1437647 gctgcggcggcgtcggcgtcggcgtctgct 1437618 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 ccgctgcgccgccgtcggcgtcggc 244 ||||| ||||||||||||||||||| Sbjct: 35605450 ccgctccgccgccgtcggcgtcggc 35605426 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccgtcggcgtcggcgtctgc 250 |||||||||||||||||||| Sbjct: 29200383 ccgtcggcgtcggcgtctgc 29200402 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 accgctgcgccgccgtcggc 238 |||||||||||||||||||| Sbjct: 24607172 accgctgcgccgccgtcggc 24607153
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 cgccgccgtcggcgtcggcgtc 247 |||||||||||||||||||||| Sbjct: 43875 cgccgccgtcggcgtcggcgtc 43896
>dbj|AK121551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033B06, full insert sequence Length = 1333 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cgccgccgtcggcgtcggcgtc 247 |||||||||||||||||||||| Sbjct: 179 cgccgccgtcggcgtcggcgtc 158
>ref|NM_195957.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0075K12.6), mRNA Length = 753 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 ccgtcggcgtcggcgtctgct 251 ||||||||||||||||||||| Sbjct: 685 ccgtcggcgtcggcgtctgct 665
>ref|NM_183804.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 747 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 cgccgctccaccgctgcgccgccgt 234 ||||||||||||||| ||||||||| Sbjct: 365 cgccgctccaccgctccgccgccgt 341
>ref|XM_470414.1| Oryza sativa (japonica cultivar-group), mRNA Length = 846 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 ccgctgcgccgccgtcggcgtcggc 244 ||||| ||||||||||||||||||| Sbjct: 288 ccgctccgccgccgtcggcgtcggc 312
>gb|AC169705.1| Rhesus Macaque BAC CH250-174C17 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 181644 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 318 actccttcttgtccttgaaga 338 ||||||||||||||||||||| Sbjct: 105732 actccttcttgtccttgaaga 105752
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ccgtcggcgtcggcgtctgct 251 ||||||||||||||||||||| Sbjct: 110423 ccgtcggcgtcggcgtctgct 110443
>emb|AL591500.6| Human DNA sequence from clone RP11-460O11 on chromosome 6, complete sequence Length = 60463 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 aaagaaagaacaaaccaaatc 64 ||||||||||||||||||||| Sbjct: 17909 aaagaaagaacaaaccaaatc 17889
>emb|AL135842.15| Human DNA sequence from clone RP1-91G5 on chromosome 1q21.1-21.3 Contains the 3' end of a novel gene, a novel gene, a high mobility group nucleosomal binding domain 3 (HMGN3) pseudogene, the C1orf10 gene for chromosome 1 open reading frame 10, the SPRL5A for small proline rich-like (epidermal differentiation complex) 5A and the NICE-1 gene for NICE-1 protein, complete sequence Length = 188285 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 aaagaaagaacaaaccaaatc 64 ||||||||||||||||||||| Sbjct: 22430 aaagaaagaacaaaccaaatc 22410
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0023F01, complete sequence Length = 145009 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 gcgccgccgtcggcgtcggcg 245 ||||||||||||||||||||| Sbjct: 125993 gcgccgccgtcggcgtcggcg 125973
>gb|AC069077.7| Homo sapiens chromosome 10 clone RP11-418N10, complete sequence Length = 160384 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 agaagaaaacagtcaattgattaga 25 ||||||||||||| ||||||||||| Sbjct: 124151 agaagaaaacagttaattgattaga 124175
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ccgtcggcgtcggcgtctgct 251 ||||||||||||||||||||| Sbjct: 50195 ccgtcggcgtcggcgtctgct 50215
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 cgccgctccaccgctgcgccgccgtcggc 238 ||||||||||||||| |||||||| |||| Sbjct: 14401997 cgccgctccaccgctacgccgccgccggc 14402025
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 gcgccgccgtcggcgtcggcg 245 ||||||||||||||||||||| Sbjct: 26463727 gcgccgccgtcggcgtcggcg 26463747
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ccgtcggcgtcggcgtctgct 251 ||||||||||||||||||||| Sbjct: 10268870 ccgtcggcgtcggcgtctgct 10268890
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 cgccgctccaccgctgcgccgccgt 234 ||||||||||||||| ||||||||| Sbjct: 12426622 cgccgctccaccgctccgccgccgt 12426598
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 gctgcgccgccgtcggcgtcg 242 ||||||||||||||||||||| Sbjct: 8090832 gctgcgccgccgtcggcgtcg 8090852
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 ccgctgcgccgccgtcggcgtcggc 244 ||||| ||||||||||||||||||| Sbjct: 48341 ccgctccgccgccgtcggcgtcggc 48317
>gb|AF049136.1|AF049136 Locusta migratoria ecdysone receptor mRNA, complete cds Length = 2401 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 gcgccgccgtcggcgtcggcgtctgcttc 253 |||| |||||||||||||||||| ||||| Sbjct: 568 gcgctgccgtcggcgtcggcgtcggcttc 596
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 ctgcgccgccgtcggcgtcggcgtc 247 |||||||| |||||||||||||||| Sbjct: 60239 ctgcgccggcgtcggcgtcggcgtc 60215
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 cgccgctccaccgctgcgccgccgt 234 ||||||||||||||| ||||||||| Sbjct: 12237 cgccgctccaccgctccgccgccgt 12213
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0011P19 Length = 150811 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 cgccgctccaccgctgcgccgccgt 234 ||||||||||||||| ||||||||| Sbjct: 112267 cgccgctccaccgctccgccgccgt 112243
>dbj|AK107208.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-B11, full insert sequence Length = 2043 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ctgcgccgccgtcggcgtcggcgtc 247 |||||||| |||||||||||||||| Sbjct: 270 ctgcgccggcgtcggcgtcggcgtc 294
>dbj|AK101366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035L04, full insert sequence Length = 916 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 ccgctgcgccgccgtcggcgtcggc 244 ||||| ||||||||||||||||||| Sbjct: 300 ccgctccgccgccgtcggcgtcggc 324
>gb|AC090227.10| Homo sapiens chromosome 18, clone RP11-813F20, complete sequence Length = 224366 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 25 accttctcatcagcatcccaaagaa 49 ||||||||||||||||| ||||||| Sbjct: 61545 accttctcatcagcatctcaaagaa 61569
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ctgcgccgccgtcggcgtcggcgtc 247 |||||||| |||||||||||||||| Sbjct: 785738 ctgcgccggcgtcggcgtcggcgtc 785762
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 ccgtcggcgtcggcgtctgct 251 ||||||||||||||||||||| Sbjct: 10274909 ccgtcggcgtcggcgtctgct 10274929
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 gcgccgccgtcggcgtcggcg 245 ||||||||||||||||||||| Sbjct: 26788991 gcgccgccgtcggcgtcggcg 26789011
>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118101 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 210 cgccgctccaccgctgcgccgccgtcggc 238 ||||||||||||||| |||||||| |||| Sbjct: 115295 cgccgctccaccgctacgccgccgccggc 115267
>gb|AC162280.4| Mus musculus chromosome 3, clone RP24-240C19, complete sequence Length = 165299 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 tcatcagcatcccaaagaaag 51 ||||||||||||||||||||| Sbjct: 96123 tcatcagcatcccaaagaaag 96143
>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam antibiotic nocardicin A biosynthesis gene cluster, partial sequence Length = 33451 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgccgccgtcggcgtcggcg 245 |||||||||||||||||||| Sbjct: 29929 cgccgccgtcggcgtcggcg 29910
>ref|XM_481676.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 308 cgccgctccaccgctccgccgccg 331
>ref|XM_481113.1| Oryza sativa (japonica cultivar-group), mRNA Length = 240 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 71 cgccgctccaccgctccgccgccg 48
>ref|XM_475739.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1572 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 gccgccgtcggcgtcggcgtctgc 250 |||| ||||||||||||||||||| Sbjct: 1213 gccgacgtcggcgtcggcgtctgc 1236
>ref|XM_469584.1| Oryza sativa (japonica cultivar-group), mRNA Length = 903 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccgtcggcgtcggcgtctgc 250 |||||||||||||||||||| Sbjct: 349 ccgtcggcgtcggcgtctgc 330
>ref|XM_478656.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2985 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tccttgctggccgccgactc 321 |||||||||||||||||||| Sbjct: 2064 tccttgctggccgccgactc 2083
>ref|XM_472832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2280 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgccgccgtcggcgtcggcg 245 |||||||||||||||||||| Sbjct: 2021 cgccgccgtcggcgtcggcg 2040
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccgtcggcgtcggcgtctgc 250 |||||||||||||||||||| Sbjct: 30330 ccgtcggcgtcggcgtctgc 30311
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 accgctgcgccgccgtcggc 238 |||||||||||||||||||| Sbjct: 65889 accgctgcgccgccgtcggc 65870
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gccgccgtcggcgtcggcgtctgc 250 |||| ||||||||||||||||||| Sbjct: 1537 gccgacgtcggcgtcggcgtctgc 1514
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgggcgccacgcgcacgccg 400 |||||||||||||||||||| Sbjct: 2283751 cgggcgccacgcgcacgccg 2283732
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gccgccgtcggcgtcggcgtctgc 250 |||| ||||||||||||||||||| Sbjct: 67829 gccgacgtcggcgtcggcgtctgc 67806
>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete sequence Length = 91084 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccgtcggcgtcggcgtctgc 250 |||||||||||||||||||| Sbjct: 62415 ccgtcggcgtcggcgtctgc 62396
>gb|AY341851.1| Oryza sativa (japonica cultivar-group) WRKY10 mRNA, complete cds Length = 2531 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgccgccgtcggcgtcggcg 245 |||||||||||||||||||| Sbjct: 2102 cgccgccgtcggcgtcggcg 2121
>gb|AY341843.1| Oryza sativa (japonica cultivar-group) WRKY2 mRNA, complete cds Length = 3152 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgccgccgtcggcgtcggcg 245 |||||||||||||||||||| Sbjct: 2758 cgccgccgtcggcgtcggcg 2777
>gb|AC026110.42| Homo sapiens 12 BAC RP11-434E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153190 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 agttaaaaaaccaactaaac 84 |||||||||||||||||||| Sbjct: 127838 agttaaaaaaccaactaaac 127819
>emb|AL583925.1|MLEPRTN9 Mycobacterium leprae strain TN complete genome; segment 9/10 Length = 308950 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gccgccgtcggcgtcggcgt 246 |||||||||||||||||||| Sbjct: 218875 gccgccgtcggcgtcggcgt 218856
>emb|BX510929.10| Zebrafish DNA sequence from clone CH211-261F9, complete sequence Length = 156428 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 aaagaaagaacaaaccaaat 63 |||||||||||||||||||| Sbjct: 122015 aaagaaagaacaaaccaaat 122034
>tpg|BK005038.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 35 (WRKY35) gene, complete cds Length = 3290 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgccgccgtcggcgtcggcg 245 |||||||||||||||||||| Sbjct: 3031 cgccgccgtcggcgtcggcg 3050
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 accgctgcgccgccgtcggc 238 |||||||||||||||||||| Sbjct: 121653 accgctgcgccgccgtcggc 121634
>gb|AY082963.1| Hordeum vulgare clone HV_CEb0009E08f CONSTANS-like protein CO7 (CO7) mRNA, partial cds Length = 1056 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 ccgctgcgccgccgtcggcgtcggcgtc 247 |||||||| || |||||||||||||||| Sbjct: 668 ccgctgcgacggcgtcggcgtcggcgtc 641
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 220 ccgctgcgccgccgtcggcgtcggcgtc 247 |||| ||||||||||||||||| ||||| Sbjct: 20377 ccgcggcgccgccgtcggcgtccgcgtc 20404
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgccgccgtcggcgtcggcg 245 |||||||||||||||||||| Sbjct: 23555595 cgccgccgtcggcgtcggcg 23555576
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 14650825 cgccgctccaccgctccgccgccg 14650848 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 10838707 cgccgctccaccgctccgccgccg 10838730 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 9964851 cgccgctccaccgctccgccgccg 9964828 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 9850151 cgccgctccaccgctccgccgccg 9850174
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tccttgctggccgccgactc 321 |||||||||||||||||||| Sbjct: 21857568 tccttgctggccgccgactc 21857549
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gccgccgtcggcgtcggcgtctgc 250 |||| ||||||||||||||||||| Sbjct: 26150489 gccgacgtcggcgtcggcgtctgc 26150466
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 actccttcttgtccttgaag 337 |||||||||||||||||||| Sbjct: 1743470 actccttcttgtccttgaag 1743451
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 acccgaacaccggccgcgagcagaccgg 366 |||||| |||| |||||||||||||||| Sbjct: 1997207 acccgaccacccgccgcgagcagaccgg 1997180
>gb|AE005007.1| Halobacterium sp. NRC-1 section 38 of 170 of the complete genome Length = 10293 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 gctgcgccgccgtcggcgtcggcg 245 ||||||||| |||||||||||||| Sbjct: 6361 gctgcgccggcgtcggcgtcggcg 6338
>dbj|AP004695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0474F07 Length = 136440 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 88529 cgccgctccaccgctccgccgccg 88552
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 4753 cgccgctccaccgctccgccgccg 4730
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 112098 cgccgctccaccgctccgccgccg 112075
>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1063H10 Length = 170453 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 114083 cgccgctccaccgctccgccgccg 114106
>dbj|AP004556.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026A08 Length = 171272 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 52492 cgccgctccaccgctccgccgccg 52515
>emb|AL512548.1|B0311F12 Oryza sativa genomic DNA, chromosome 4, BAC clone: B0311F12, complete sequence Length = 55361 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 cgccgctccaccgctgcgccgccg 233 ||||||||||||||| |||||||| Sbjct: 17900 cgccgctccaccgctccgccgccg 17923
>dbj|AK110710.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-C12, full insert sequence Length = 997 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 ccgtcggcgtcggcgtctgc 250 |||||||||||||||||||| Sbjct: 573 ccgtcggcgtcggcgtctgc 592
>dbj|AK101260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032I06, full insert sequence Length = 1108 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 ccgtcggcgtcggcgtctgc 250 |||||||||||||||||||| Sbjct: 473 ccgtcggcgtcggcgtctgc 454
>dbj|AK067424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107C16, full insert sequence Length = 2986 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tccttgctggccgccgactc 321 |||||||||||||||||||| Sbjct: 2064 tccttgctggccgccgactc 2083
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tccttgctggccgccgactc 321 |||||||||||||||||||| Sbjct: 71244 tccttgctggccgccgactc 71225
>emb|AL133372.4|CNS01DUX Human chromosome 14 DNA sequence BAC R-269C4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 190910 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 aaagaaagaacaaaccaaat 63 |||||||||||||||||||| Sbjct: 137675 aaagaaagaacaaaccaaat 137694
>emb|X80162.1|HSPHP32VD Bacteriophage phi-H hp32 gene Length = 4505 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgccgccgtcggcgtcggcg 245 |||||||||||||||||||| Sbjct: 955 cgccgccgtcggcgtcggcg 936
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 217 ccaccgctgcgccgccgtcggcgt 240 |||||||| ||||||||||||||| Sbjct: 624533 ccaccgcttcgccgccgtcggcgt 624556
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cgccgccgtcggcgtcggcg 245 |||||||||||||||||||| Sbjct: 111498 cgccgccgtcggcgtcggcg 111479
>emb|X14573.1|PVRICP18 Pseudorabies virus ICP18.5 gene Length = 2524 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 ccgctgcgccgccgtcggcgtcggcgtc 247 |||| ||||||||||||||||| ||||| Sbjct: 1612 ccgcggcgccgccgtcggcgtccgcgtc 1585
>gb|U00018.1|U00018 Mycobacterium leprae cosmid B2168 Length = 42991 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gccgccgtcggcgtcggcgt 246 |||||||||||||||||||| Sbjct: 30461 gccgccgtcggcgtcggcgt 30442 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,008,953 Number of Sequences: 3902068 Number of extensions: 3008953 Number of successful extensions: 77631 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75423 Number of HSP's gapped (non-prelim): 2208 length of query: 401 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 379 effective length of database: 17,147,199,772 effective search space: 6498788713588 effective search space used: 6498788713588 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
