Clone Information

BLAST Search Result

Clone Name	rbast78g07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CP2S1_MOUSE (Q9DBX6) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1)	32	0.37
2	ACT_CRYNV (P48465) Actin	28	4.1
3	GT4_ARATH (Q9M9U0) Putative glycosyltransferase 4 (EC 2.4.-.-) (...	28	5.3
4	ACTN_STYCL (P53475) Actin, muscle	28	5.3
5	ACTM_STYCL (P26198) Actin, muscle	28	6.9
6	CL011_HUMAN (Q9NVM9) Protein C12orf11 (Sarcoma antigen NY-SAR-95)	28	6.9
7	ACTT_FUGRU (P53482) Actin, alpha skeletal muscle 2	28	6.9
8	ACTA_RAT (P62738) Actin, aortic smooth muscle (Alpha-actin-2)	28	6.9
9	ACTA_RABIT (P62740) Actin, aortic smooth muscle (Alpha-actin-2)	28	6.9
10	ACTA_MOUSE (P62737) Actin, aortic smooth muscle (Alpha-actin-2)	28	6.9
11	ACTA_HUMAN (P62736) Actin, aortic smooth muscle (Alpha-actin-2)	28	6.9
12	ACTA_CHICK (P08023) Actin, aortic smooth muscle (Alpha-actin)	28	6.9
13	ACTA_BOVIN (P62739) Actin, aortic smooth muscle (Alpha-actin-2)	28	6.9
14	CL011_MOUSE (Q8QZV7) Protein C12orf11 homolog	28	6.9
15	ACTH_RAT (P63269) Actin, gamma-enteric smooth muscle (Smooth mus...	28	6.9
16	ACTH_MOUSE (P63268) Actin, gamma-enteric smooth muscle (Smooth m...	28	6.9
17	ACTH_HUMAN (P63267) Actin, gamma-enteric smooth muscle (Smooth m...	28	6.9
18	ACTH_CHICK (P63270) Actin, gamma-enteric smooth muscle (Smooth m...	28	6.9
19	GUN2_BACSU (P10475) Endoglucanase precursor (EC 3.2.1.4) (Endo-1...	24	8.7
20	ACTM_CIOSA (O15998) Actin, muscle	27	9.0
21	ACT2_HALRO (P27130) Actin, muscle 2/4/4A	27	9.0
22	ACT1_HALRO (P53460) Actin, muscle 1A	27	9.0
23	ZN451_MOUSE (Q8C0P7) Zinc finger protein 451	27	9.0
24	ACTS_RAT (P68136) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
25	ACTS_RABIT (P68135) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
26	ACTS_PIG (P68137) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
27	ACTS_OREMO (P68264) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
28	ACTS_MOUSE (P68134) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
29	ACTS_HUMAN (P68133) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
30	ACTS_FUGRU (P68140) Actin, alpha skeletal muscle 1	27	9.0
31	ACTS_CYPCA (P53479) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
32	ACTS_CHICK (P68139) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
33	ACTS_CARAU (P49055) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
34	ACTS_BOVIN (P68138) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
35	ACTS_ATRMM (Q90X97) Actin, alpha skeletal muscle (Alpha-actin-1)	27	9.0
36	ACTC_RAT (P68035) Actin, alpha cardiac (Alpha-cardiac actin)	27	9.0
37	ACTC_MOUSE (P68033) Actin, alpha cardiac (Alpha-cardiac actin)	27	9.0
38	ACTC_HUMAN (P68032) Actin, alpha cardiac (Alpha-cardiac actin)	27	9.0
39	ACTC_FUGRU (P53480) Actin, alpha cardiac	27	9.0
40	ACTC_CHICK (P68034) Actin, alpha cardiac (Alpha-cardiac actin)	27	9.0
41	ACT3_XENLA (P04752) Actin, alpha sarcomeric/skeletal (Actin alph...	27	9.0
42	ACT2_XENTR (P20399) Actin, alpha sarcomeric/cardiac (Actin alpha 2)	27	9.0
43	ACT2_XENLA (P10995) Actin, alpha sarcomeric/cardiac (Actin alpha 2)	27	9.0
44	ACT1_XENLA (P04751) Actin, alpha cardiac muscle (Actin alpha 1)	27	9.0
45	ACT1_ORYLA (Q98972) Actin, muscle-type (OlMA1)	27	9.0
46	ACT_PROCL (P45521) Actin (Fragment)	27	9.0
47	ACTB_CANFA (O18840) Actin, cytoplasmic 1 (Beta-actin)	27	9.0
48	ZN451_HUMAN (Q9Y4E5) Zinc finger protein 451 (Coactivator for st...	27	9.0
49	CR9CA_BACTO (Q45733) Pesticidal crystal protein cry9Ca (Insectic...	27	9.0

>CP2S1_MOUSE (Q9DBX6) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1)|
          Length = 501

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +3

Query: 162 GISQAWQQANTLSNLILLQLETPFVTVANHIGTAIFFLVIMTTG*SVKTHQRLYQRRTPQ 341
           GIS  W QA  + + +L  L  P   + +H+GT   F +       V+ HQ  +Q   P 
Sbjct: 212 GISSPWGQAYEMFSWLLQPLPGPHTQLQHHLGTLAAFTIQ-----QVQKHQGRFQTSGPA 266

Query: 342 TD 347
            D
Sbjct: 267 RD 268

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>ACT_CRYNV (P48465) Actin|
          Length = 375

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  I+T  D      +  WH      YN+ RV  ED   ++     T  P 
Sbjct: 63  GILTLKYPIEHGIVTNWDDM----EKIWHHTF---YNELRVAPEDDPVLL-----TEAPL 110

Query: 353 SP 358
           +P
Sbjct: 111 NP 112

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>GT4_ARATH (Q9M9U0) Putative glycosyltransferase 4 (EC 2.4.-.-) (AtGT4)|
          Length = 513

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 126 TTTMRTRARRNFGISQAWQQANTLSNLILLQLETPFVTVANHIGT 260
           TT +     R  G  + WQ  NTL N I   +   FVT+   +GT
Sbjct: 17  TTAVSNGGWRTRGFLRGWQIQNTLFNNIKFMILCCFVTILILLGT 61

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>ACTN_STYCL (P53475) Actin, muscle|
          Length = 378

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH  +   YN+ RV  E+   ++     T  P 
Sbjct: 66  GILTLKYPIEHGIITNWDDM----EKIWHHTM---YNELRVAPEEHPTLL-----TEAPL 113

Query: 353 SP 358
           +P
Sbjct: 114 NP 115

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>ACTM_STYCL (P26198) Actin, muscle|
          Length = 378

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVS 325
           G+ T KYP++  IIT  D      +  WH  +   YN+ RV  E+   +++
Sbjct: 66  GILTLKYPIEHGIITNWDDM----EKIWHHTM---YNELRVAPEEHPTLLT 109

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>CL011_HUMAN (Q9NVM9) Protein C12orf11 (Sarcoma antigen NY-SAR-95)|
          Length = 706

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 304 RLIRDCINEEHHKQTHQSRNSDHQLTAER 390
           R++ DC+ E  H+    + NSDH +  ++
Sbjct: 173 RMLEDCVQETIHEHNKLAANSDHLMQIQK 201

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>ACTT_FUGRU (P53482) Actin, alpha skeletal muscle 2|
          Length = 377

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTA_RAT (P62738) Actin, aortic smooth muscle (Alpha-actin-2)|
          Length = 377

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTA_RABIT (P62740) Actin, aortic smooth muscle (Alpha-actin-2)|
          Length = 377

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTA_MOUSE (P62737) Actin, aortic smooth muscle (Alpha-actin-2)|
          Length = 377

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTA_HUMAN (P62736) Actin, aortic smooth muscle (Alpha-actin-2)|
          Length = 377

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTA_CHICK (P08023) Actin, aortic smooth muscle (Alpha-actin)|
          Length = 377

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTA_BOVIN (P62739) Actin, aortic smooth muscle (Alpha-actin-2)|
          Length = 377

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>CL011_MOUSE (Q8QZV7) Protein C12orf11 homolog|
          Length = 732

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 304 RLIRDCINEEHHKQTHQSRNSDHQLTAER 390
           R++ DC+ E  H+    + NSDH +  ++
Sbjct: 173 RMLEDCVQETIHEHNKLAANSDHLMQIQK 201

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>ACTH_RAT (P63269) Actin, gamma-enteric smooth muscle (Smooth muscle gamma|
           actin) (Alpha-actin-3)
          Length = 376

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 64  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 111

Query: 353 SP 358
           +P
Sbjct: 112 NP 113

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>ACTH_MOUSE (P63268) Actin, gamma-enteric smooth muscle (Smooth muscle gamma|
           actin) (Alpha-actin-3)
          Length = 376

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 64  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 111

Query: 353 SP 358
           +P
Sbjct: 112 NP 113

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>ACTH_HUMAN (P63267) Actin, gamma-enteric smooth muscle (Smooth muscle gamma|
           actin) (Alpha-actin-3)
          Length = 376

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 64  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 111

Query: 353 SP 358
           +P
Sbjct: 112 NP 113

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>ACTH_CHICK (P63270) Actin, gamma-enteric smooth muscle (Smooth muscle gamma|
           actin) (Alpha-actin-3)
          Length = 376

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 64  GILTLKYPIEHGIITNWDDM----EKIWHHSF---YNELRVAPEEHPTLL-----TEAPL 111

Query: 353 SP 358
           +P
Sbjct: 112 NP 113

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>GUN2_BACSU (P10475) Endoglucanase precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Carboxymethyl-cellulase)
           (CMCASE) (Cellulase)
          Length = 499

 Score = 24.3 bits (51), Expect(2) = 8.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +3

Query: 333 TPQTDPPVQEFGSSTDCRAG 392
           TP  D P QE G S   RAG
Sbjct: 342 TPSKDKPTQENGISVQYRAG 361



 Score = 21.6 bits (44), Expect(2) = 8.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 146 SKKKLWHLTGLATSKYPVKLNIITTRD 226
           SK   W L+ L+ S   V+ NI+ T+D
Sbjct: 308 SKTGGWRLSDLSASGTFVRENILGTKD 334

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>ACTM_CIOSA (O15998) Actin, muscle|
          Length = 378

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 66  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 113

Query: 353 SP 358
           +P
Sbjct: 114 NP 115

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>ACT2_HALRO (P27130) Actin, muscle 2/4/4A|
          Length = 378

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 66  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 113

Query: 353 SP 358
           +P
Sbjct: 114 NP 115

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>ACT1_HALRO (P53460) Actin, muscle 1A|
          Length = 378

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 66  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 113

Query: 353 SP 358
           +P
Sbjct: 114 NP 115

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>ZN451_MOUSE (Q8C0P7) Zinc finger protein 451|
          Length = 1056

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 227 PFRHCCKSYWHGHLLLGY 280
           P  HC K + +GHLLLG+
Sbjct: 172 PIMHCNKEFDNGHLLLGH 189

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>ACTS_RAT (P68136) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_RABIT (P68135) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_PIG (P68137) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_OREMO (P68264) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_MOUSE (P68134) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_HUMAN (P68133) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_FUGRU (P68140) Actin, alpha skeletal muscle 1|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_CYPCA (P53479) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_CHICK (P68139) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_CARAU (P49055) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_BOVIN (P68138) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTS_ATRMM (Q90X97) Actin, alpha skeletal muscle (Alpha-actin-1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTC_RAT (P68035) Actin, alpha cardiac (Alpha-cardiac actin)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTC_MOUSE (P68033) Actin, alpha cardiac (Alpha-cardiac actin)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTC_HUMAN (P68032) Actin, alpha cardiac (Alpha-cardiac actin)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTC_FUGRU (P53480) Actin, alpha cardiac|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACTC_CHICK (P68034) Actin, alpha cardiac (Alpha-cardiac actin)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACT3_XENLA (P04752) Actin, alpha sarcomeric/skeletal (Actin alpha 3)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACT2_XENTR (P20399) Actin, alpha sarcomeric/cardiac (Actin alpha 2)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACT2_XENLA (P10995) Actin, alpha sarcomeric/cardiac (Actin alpha 2)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACT1_XENLA (P04751) Actin, alpha cardiac muscle (Actin alpha 1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACT1_ORYLA (Q98972) Actin, muscle-type (OlMA1)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      +  WH      YN+ RV  E+   ++     T  P 
Sbjct: 65  GILTLKYPIEHGIITNWDDM----EKIWHHTF---YNELRVAPEEHPTLL-----TEAPL 112

Query: 353 SP 358
           +P
Sbjct: 113 NP 114

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>ACT_PROCL (P45521) Actin (Fragment)|
          Length = 322

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  IIT  D      K ++H      YN+ R+  E+S  ++     T  P 
Sbjct: 10  GILTLKYPIEHGIITNWDDME---KIWYHTF----YNELRIAPEESPTML-----TEAPL 57

Query: 353 SP 358
           +P
Sbjct: 58  NP 59

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>ACTB_CANFA (O18840) Actin, cytoplasmic 1 (Beta-actin)|
          Length = 375

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +2

Query: 173 GLATSKYPVKLNIITTRDPFRHCCKSYWHGHLLLGYNDYRVICEDSSEIVSTKNTTNRPT 352
           G+ T KYP++  I+T  D      +  WH      YN+ RV  E++  ++     T  P 
Sbjct: 63  GILTLKYPIEHGIVTNWDDM----EKIWHHTF---YNELRVAPEEAPVLL-----TEAPL 110

Query: 353 SP 358
           +P
Sbjct: 111 NP 112

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>ZN451_HUMAN (Q9Y4E5) Zinc finger protein 451 (Coactivator for steroid|
           receptors)
          Length = 1061

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 227 PFRHCCKSYWHGHLLLGY 280
           P  HC K + +GHLLLG+
Sbjct: 172 PIMHCNKEFDNGHLLLGH 189

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>CR9CA_BACTO (Q45733) Pesticidal crystal protein cry9Ca (Insecticidal|
           delta-endotoxin CryIXC(a)) (Crystaline entomocidal
           protoxin) (130 kDa crystal protein)
          Length = 1157

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = +2

Query: 203 LNIITTRDPFRHCCKSYWHGHLL-LGYNDYRVICEDSSEIVSTKNTTNRPTSPG 361
           L I + R P       YW GH L   Y +   + EDS  +++T   T  P   G
Sbjct: 353 LTISSNRFPVSSNFMDYWSGHTLRRSYLNDSAVQEDSYGLITTTRATINPGVDG 406


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,801,318
Number of Sequences: 219361
Number of extensions: 964489
Number of successful extensions: 2776
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 2711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2776
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result