>dbj|AK070255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043P14, full
           insert sequence
          Length = 1193

 Score =  115 bits (58), Expect = 1e-22
 Identities = 130/154 (84%)
 Strand = Plus / Minus

                                                                       
Query: 294 cttacgccgcggccaacttcatctcctgttggtcctcgagattcagaacgtcgagcaact 353
           ||||||| | ||||| ||||||||| | ||||||||||||||| ||||| | ||||| ||
Sbjct: 958 cttacgcagtggccagcttcatctcttcttggtcctcgagatttagaacatggagcagct 899

                                                                       
Query: 354 ttggccaagattcagggattcctccgggcaaatcgaactccagaaccttcccctgcttct 413
           |||||||||| |||||||||||||| |||||||| || || | || ||||||||| | | 
Sbjct: 898 ttggccaagactcagggattcctccaggcaaatcaaattctaaaagcttcccctgttgcc 839

                                             
Query: 414 gatagaaatcctccacgggttggctcatttcatt 447
           | |||||| |||| || ||||||||||| |||||
Sbjct: 838 ggtagaaaccctcaacaggttggctcatgtcatt 805

>ref|XM_493821.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 972

 Score =  113 bits (57), Expect = 5e-22
 Identities = 129/153 (84%)
 Strand = Plus / Minus

                                                                       
Query: 295 ttacgccgcggccaacttcatctcctgttggtcctcgagattcagaacgtcgagcaactt 354
           |||||| | ||||| ||||||||| | ||||||||||||||| ||||| | ||||| |||
Sbjct: 972 ttacgcagtggccagcttcatctcttcttggtcctcgagatttagaacatggagcagctt 913

                                                                       
Query: 355 tggccaagattcagggattcctccgggcaaatcgaactccagaaccttcccctgcttctg 414
           ||||||||| |||||||||||||| |||||||| || || | || ||||||||| | | |
Sbjct: 912 tggccaagactcagggattcctccaggcaaatcaaattctaaaagcttcccctgttgccg 853

                                            
Query: 415 atagaaatcctccacgggttggctcatttcatt 447
            |||||| |||| || ||||||||||| |||||
Sbjct: 852 gtagaaaccctcaacaggttggctcatgtcatt 820

>dbj|AK058635.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-D03, full
           insert sequence
          Length = 383

 Score =  111 bits (56), Expect = 2e-21
 Identities = 125/148 (84%)
 Strand = Plus / Minus

                                                                       
Query: 294 cttacgccgcggccaacttcatctcctgttggtcctcgagattcagaacgtcgagcaact 353
           ||||||| | ||||| ||||||||| | ||||||||||||||| ||||| | ||||| ||
Sbjct: 148 cttacgcagtggccagcttcatctcttcttggtcctcgagatttagaacatggagcagct 89

                                                                       
Query: 354 ttggccaagattcagggattcctccgggcaaatcgaactccagaaccttcccctgcttct 413
           |||||||||| |||||||||||||| |||||||| || || | || ||||||||| | | 
Sbjct: 88  ttggccaagactcagggattcctccaggcaaatcaaattctaaaagcttcccctgttgcc 29

                                       
Query: 414 gatagaaatcctccacgggttggctcat 441
           | |||||| |||| || |||||||||||
Sbjct: 28  ggtagaaaccctcaacaggttggctcat 1

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 3e-20
 Identities = 123/146 (84%)
 Strand = Plus / Minus

                                                                           
Query: 294     cttacgccgcggccaacttcatctcctgttggtcctcgagattcagaacgtcgagcaact 353
               ||||||| | ||||| ||||||||| | ||||||||||||||| ||||| | ||||| ||
Sbjct: 1699036 cttacgcagtggccagcttcatctcttcttggtcctcgagatttagaacatggagcagct 1698977

                                                                           
Query: 354     ttggccaagattcagggattcctccgggcaaatcgaactccagaaccttcccctgcttct 413
               |||||||||| |||||||||||||| |||||||| || || | || ||||||||| | | 
Sbjct: 1698976 ttggccaagactcagggattcctccaggcaaatcaaattctaaaagcttcccctgttgcc 1698917

                                         
Query: 414     gatagaaatcctccacgggttggctc 439
               | |||||| |||| || |||||||||
Sbjct: 1698916 ggtagaaaccctcaacaggttggctc 1698891

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 3e-20
 Identities = 123/146 (84%)
 Strand = Plus / Minus

                                                                           
Query: 294     cttacgccgcggccaacttcatctcctgttggtcctcgagattcagaacgtcgagcaact 353
               ||||||| | ||||| ||||||||| | ||||||||||||||| ||||| | ||||| ||
Sbjct: 1699034 cttacgcagtggccagcttcatctcttcttggtcctcgagatttagaacatggagcagct 1698975

                                                                           
Query: 354     ttggccaagattcagggattcctccgggcaaatcgaactccagaaccttcccctgcttct 413
               |||||||||| |||||||||||||| |||||||| || || | || ||||||||| | | 
Sbjct: 1698974 ttggccaagactcagggattcctccaggcaaatcaaattctaaaagcttcccctgttgcc 1698915

                                         
Query: 414     gatagaaatcctccacgggttggctc 439
               | |||||| |||| || |||||||||
Sbjct: 1698914 ggtagaaaccctcaacaggttggctc 1698889

>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              clone:P0043E01
          Length = 154128

 Score =  107 bits (54), Expect = 3e-20
 Identities = 123/146 (84%)
 Strand = Plus / Minus

                                                                          
Query: 294    cttacgccgcggccaacttcatctcctgttggtcctcgagattcagaacgtcgagcaact 353
              ||||||| | ||||| ||||||||| | ||||||||||||||| ||||| | ||||| ||
Sbjct: 111499 cttacgcagtggccagcttcatctcttcttggtcctcgagatttagaacatggagcagct 111440

                                                                          
Query: 354    ttggccaagattcagggattcctccgggcaaatcgaactccagaaccttcccctgcttct 413
              |||||||||| |||||||||||||| |||||||| || || | || ||||||||| | | 
Sbjct: 111439 ttggccaagactcagggattcctccaggcaaatcaaattctaaaagcttcccctgttgcc 111380

                                        
Query: 414    gatagaaatcctccacgggttggctc 439
              | |||||| |||| || |||||||||
Sbjct: 111379 ggtagaaaccctcaacaggttggctc 111354

>gb|AY105553.1| Zea mays PCO069350 mRNA sequence
          Length = 740

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 124/152 (81%)
 Strand = Plus / Minus

                                                                       
Query: 296 tacgccgcggccaacttcatctcctgttggtcctcgagattcagaacgtcgagcaacttt 355
           ||||| || |||||| ||| ||||| |||||||||||| || ||||| | ||||| ||||
Sbjct: 328 tacgctgcagccaacctcaactcctcttggtcctcgaggtttagaacctggagcagcttt 269

                                                                       
Query: 356 ggccaagattcagggattcctccgggcaaatcgaactccagaaccttcccctgcttctga 415
           ||||||||||||||||| || || ||||| || || ||||  | |||||||||||   | 
Sbjct: 268 ggccaagattcagggatcccaccaggcaagtcaaattccaagagcttcccctgctctcgg 209

                                           
Query: 416 tagaaatcctccacgggttggctcatttcatt 447
           |||||| | ||||| ||||| ||||| |||||
Sbjct: 208 tagaaaccttccacaggttgactcatgtcatt 177

>dbj|AK059424.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E06, full
           insert sequence
          Length = 326

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 294 cttacgccgcggccaacttcatctcctgttggtcctcgagattcagaac 342
           ||||||| | ||||| ||||||||| | ||||||||||||||| |||||
Sbjct: 51  cttacgcagtggccagcttcatctcttcttggtcctcgagatttagaac 3

>gb|U95743.1|HUU95743 Homo sapiens chromosome 16 BAC clone CIT987-SK65D3, complete sequence
          Length = 192730

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 391   ctccagaaccttcccctgcttctgat 416
             |||||| |||||||||||||||||||
Sbjct: 92789 ctccagtaccttcccctgcttctgat 92764

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 15      cttcatcttgaataaacatta 35
               |||||||||||||||||||||
Sbjct: 3805514 cttcatcttgaataaacatta 3805534

>emb|AL928924.12| Mouse DNA sequence from clone RP23-307E15 on chromosome 2, complete
             sequence
          Length = 195936

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 238   gaaaaaatgtaaggtatgctt 258
             |||||||||||||||||||||
Sbjct: 16902 gaaaaaatgtaaggtatgctt 16922

>gb|AC113104.15| Mus musculus chromosome 18, clone RP23-321L15, complete sequence
          Length = 207418

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    ttggctcatttcattgtaaa 452
              ||||||||||||||||||||
Sbjct: 198562 ttggctcatttcattgtaaa 198543

>gb|AC036222.23| Homo sapiens chromosome 17, clone RP11-433M22, complete sequence
          Length = 174965

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 213   gtttttatccttcttccccattat 236
             |||||||||||||||| |||||||
Sbjct: 89967 gtttttatccttcttctccattat 89990

>gb|AY176748.1| Gymnoascoideus petalosporus strain ATCC 34351 28S ribosomal RNA
           gene, partial sequence
          Length = 948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 aggggacttacgccgcggcc 307
           ||||||||||||||||||||
Sbjct: 133 aggggacttacgccgcggcc 114

>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    gcaccggctcgcgaaaacgc 140
              ||||||||||||||||||||
Sbjct: 282211 gcaccggctcgcgaaaacgc 282230

>ref|NM_001016517.2| Xenopus tropicalis zinc finger protein 160 (zfp160), mRNA
          Length = 2204

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 214 tttttatccttcttccccat 233
           ||||||||||||||||||||
Sbjct: 80  tttttatccttcttccccat 61

>emb|AL591426.17| Mouse DNA sequence from clone RP23-345E8 on chromosome 11 Contains a
             novel gene, the Arht1 gene for ras homolog gene family
             member T1, the 5' end of the Rhbdl4 gene for rhomboid
             veinlet-like 4 (Drosophila), complete sequence
          Length = 153420

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   acatatctatggagacaaga 212
             ||||||||||||||||||||
Sbjct: 54217 acatatctatggagacaaga 54198

>emb|BX914217.19| Zebrafish DNA sequence from clone DKEY-175H14 in linkage group 18,
             complete sequence
          Length = 133981

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tcttcatcttgaataaacat 33
             ||||||||||||||||||||
Sbjct: 50191 tcttcatcttgaataaacat 50172

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 408     gcttctgatagaaatcctcc 427
               ||||||||||||||||||||
Sbjct: 1761900 gcttctgatagaaatcctcc 1761919

>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete
             sequence
          Length = 219580

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     tccatcactcttcatcttga 25
             ||||||||||||||||||||
Sbjct: 87847 tccatcactcttcatcttga 87828

>gb|AY220127.1| Mus musculus osteopontin gene, promoter region and 5' UTR
          Length = 5521

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 4    agtccatcactcttcatctt 23
            ||||||||||||||||||||
Sbjct: 2210 agtccatcactcttcatctt 2191

>gb|AC011748.7| Homo sapiens BAC clone RP11-441M4 from 2, complete sequence
          Length = 127037

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   ctgcttctgatagaaatcct 425
             ||||||||||||||||||||
Sbjct: 97635 ctgcttctgatagaaatcct 97616

>gb|AC012668.13| Homo sapiens BAC clone RP11-458D8 from 2, complete sequence
          Length = 192396

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 15     cttcatcttgaataaacattacat 38
              |||| |||||||||||||||||||
Sbjct: 151003 cttcctcttgaataaacattacat 150980

>dbj|AB075340.1| Gymnoascus punctatus gene for 28S ribosomal RNA, partial sequence
          Length = 611

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 aggggacttacgccgcggcc 307
           ||||||||||||||||||||
Sbjct: 153 aggggacttacgccgcggcc 134

>dbj|AB075339.1| Gymnoascus marginosporus gene for 28S ribosomal RNA, partial
           sequence
          Length = 605

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 aggggacttacgccgcggcc 307
           ||||||||||||||||||||
Sbjct: 146 aggggacttacgccgcggcc 127

>emb|CR926215.2| Xenopus tropicalis finished cDNA, clone TNeu074i11
          Length = 2204

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 214 tttttatccttcttccccat 233
           ||||||||||||||||||||
Sbjct: 80  tttttatccttcttccccat 61

>dbj|AB040687.1| Rollandina hyalinospora gene for 28S rRNA, partial sequence,
           strain:CBS 548.72
          Length = 562

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 aggggacttacgccgcggcc 307
           ||||||||||||||||||||
Sbjct: 134 aggggacttacgccgcggcc 115

>dbj|AB040685.1| Gymnoascoideus petalosporus gene for 28S rRNA, partial sequence,
           strain:CBS 252.72
          Length = 563

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 aggggacttacgccgcggcc 307
           ||||||||||||||||||||
Sbjct: 136 aggggacttacgccgcggcc 117


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,018,196
Number of Sequences: 3902068
Number of extensions: 4018196
Number of successful extensions: 74051
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73930
Number of HSP's gapped (non-prelim): 121
length of query: 465
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 443
effective length of database: 17,147,199,772
effective search space: 7596209498996
effective search space used: 7596209498996
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)