>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21|
          Length = 348

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 21/69 (30%), Positives = 32/69 (46%)
 Frame = -2

Query: 385 PLHKTRSSKMLIKRHSKRRLSDYGNCSTTRRSRPQAAQTWPRPPQCRPSKSSLCVREPRC 206
           PL  +RSS+   +  S+ R       S +R SR ++      P +C  S+S      PR 
Sbjct: 270 PLSHSRSSRSRSRSRSRSRSRSRSPLSHSRSSRSRSPSRSRSPSRCASSRSRSPAHRPRR 329

Query: 205 DSTTRRNQP 179
            S++R N P
Sbjct: 330 HSSSRVNPP 338

>RF2B_ORYSA (Q6S4P4) Transcription factor RF2b|
          Length = 329

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -1

Query: 425 LTVGNSHLRQRIAALAQDKIFKDAHQEALKEEIERLR 315
           L+  N+ L+ R+ A+ Q    +DA  +ALK+E+ERL+
Sbjct: 188 LSAENAELKIRLQAMEQQAQLRDALNDALKQELERLK 224

>POF21_ARATH (Q04088) Probable transcription factor PosF21 (AtbZIP59)|
          Length = 398

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = -1

Query: 425 LTVGNSHLRQRIAALAQDKIFKDAHQEALKEEIERLRQL 309
           LTV N+ L+ R+  + Q    +D   EALKEEI+ L+ L
Sbjct: 257 LTVENNELKLRLQTMEQQVHLQDELNEALKEEIQHLKVL 295

>LT4R2_HUMAN (Q9NPC1) Leukotriene B4 receptor 2 (LTB4-R2) (Seven transmembrane|
           receptor BLTR2) (Leukotriene B4 receptor BLT2) (LTB4
           receptor JULF2)
          Length = 389

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = -2

Query: 331 RLSDYGNCSTTRRSRPQAAQTWPRPPQCRPSKSSLCVREP 212
           R S  G C T  R        W  PP CRP + S+C R P
Sbjct: 6   RASQVGFCPTPERP------LWRLPPTCRPRRMSVCYRPP 39

>MDC1_RAT (Q5U2M8) Mediator of DNA damage checkpoint protein 1|
          Length = 1279

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
 Frame = -2

Query: 388  PPLHKTRSSKMLIKRHSKRRLSDYGNCSTTRRSRPQAAQTWPRPPQCRPSKSSLCVRE-- 215
            P +   RSS+M    HS   L  Y  C T   ++P A++   RP + R ++SS    E  
Sbjct: 837  PNVRPRRSSRMTPSPHSSAALKPYTTCPT---NQPAASRPTSRPTRGRANRSSTRTPELI 893

Query: 214  ----PRCDSTTRRNQP 179
                P    +T   QP
Sbjct: 894  VPTGPELQPSTSTEQP 909

>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated|
           protein 10.4) (High sulfur keratin-associated protein
           10.4) (Keratin-associated protein 18-4)
           (Keratin-associated protein 18.4)
          Length = 401

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -2

Query: 310 CSTTRRSRPQAAQTWPRPPQCRPSKSSLCVREPRCDSTTRRNQPFC 173
           C TT   RP ++ +    P CRP   + CV  P C + T   QP C
Sbjct: 349 CCTTSCCRPSSSVSLLCRPVCRP---ACCVPVPSCCAPTSSCQPSC 391

>FRM4B_MOUSE (Q920B0) FERM domain-containing protein 4B (GRP1-binding protein|
           GRSP1) (Golgi-associated band 4.1-like protein) (GOBLIN)
          Length = 981

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
 Frame = -2

Query: 421 PSATAISGKELPP-------LHKTRSS---KMLIKRHSKRRLSDYGNCSTTRRSRPQAAQ 272
           PS+   S + LPP       +H  +SS   + +  RHS+  LS + +   T   RPQ  +
Sbjct: 549 PSSVPHSPRILPPKSLGIERIHFRKSSINEQFMDTRHSREMLSTHSSPYKTLERRPQGGR 608

Query: 271 TWPRPPQCRPSKSSLCVREPRCDSTTRRNQPFCVDFLHSLIS 146
           + P  P    +  S    EP   S   R +   ++    L+S
Sbjct: 609 SMPTTPVLTRNAYSSSHLEPDSSSQHCRQRSGSLESQSHLLS 650

>G6PIB_ORYSA (P42863) Glucose-6-phosphate isomerase, cytosolic B (EC 5.3.1.9)|
           (GPI-B) (Phosphoglucose isomerase B) (PGI-B)
           (Phosphohexose isomerase B) (PHI-B)
          Length = 567

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = -1

Query: 401 RQRIAALAQDKIFKDAHQEALKEEIERLRQLFHHQKIKATGGTDMATATSMQAKQELLMC 222
           RQR      +K+FK A    LKE+IE+   +F   KI +T    +        + E++  
Sbjct: 54  RQRATGETMEKLFKLAEAAKLKEKIEK---MFSGDKINSTENRSVLHVALRAPRDEVIKS 110

Query: 221 EG 216
           +G
Sbjct: 111 DG 112

>CT151_HUMAN (Q8NC74) Protein C20orf151|
          Length = 664

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -1

Query: 413 NSHLR--QRIAALAQDKIFKDAHQEALKEEIERLRQLFHHQKIKATGGT 273
           +SHL+  QRI  L  +        E LKEE++RLR L    K +A  GT
Sbjct: 92  SSHLQNLQRIFILTNEMNGLKEENETLKEEVKRLRGLGDRPKPRAKEGT 140

>POL1_TORVR (P29150) RNA1 polyprotein (P1) [Contains: X1 protein; X2 protein;|
           Putative ATP-dependent helicase (EC 3.6.1.-)
           (NTP-binding protein) (NTB) (Membrane-binding protein);
           Viral genome-linked protein (VPg); Picornain 3C-like
           protease (EC 3.4.22.-)
          Length = 2197

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
 Frame = -2

Query: 364 SKMLIKRHSKRRLSDYGNCSTTRRSRPQAAQTWPRPP-QCRPSKSSL----CVREPRCDS 200
           +++  K  S +RL  +   +   R RP    ++P PP  C+P  + L         RC  
Sbjct: 244 AELASKSASLQRLKAFHRAN---RVRPVLNNSFPSPPLACKPDPALLERLRLATPSRCTV 300

Query: 199 TTRRNQPFCVDFLHSLISIHRVETHQ 122
            T+R + F V  L + I + +  +HQ
Sbjct: 301 ATKRQRDFVVAPLATQIRVAKCASHQ 326

>Y436_RICPR (O05963) Hypothetical protein RP436|
          Length = 141

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -3

Query: 168 IFFIHSSRFIVWKHTNVTRLFVQFDMFIVFV 76
           IF+   +   + +H N+T+L+ Q++ FI+F+
Sbjct: 68  IFYASKNEQNILRHKNLTKLYYQYETFIIFL 98

>DOF53_ARATH (Q84TE9) Dof zinc finger protein DOF5.3 (AtDOF5.3)|
          Length = 257

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 298 RRSRPQAAQTWPRPPQCRPSKSSLCVREPRCDSTTRRNQPFC 173
           ++  P  A T P+PP+       L +R PRCDST   N  FC
Sbjct: 37  KKPSPATAVTRPQPPE-------LALRCPRCDST---NTKFC 68

>G6PIA_ORYSA (P42862) Glucose-6-phosphate isomerase, cytosolic A (EC 5.3.1.9)|
           (GPI-A) (Phosphoglucose isomerase A) (PGI-A)
           (Phosphohexose isomerase A) (PHI-A)
          Length = 567

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -1

Query: 401 RQRIAALAQDKIFKDAHQEALKEEIERLRQLFHHQKIKATGGTDMATATSMQAKQELLMC 222
           RQR      +K+FK A    LKE+IE+   +F   KI +T    +        + E++  
Sbjct: 54  RQRATGETMEKLFKLAEAAKLKEKIEK---MFRGDKINSTENRSVLHVALRAPRDEVINS 110

Query: 221 EG 216
            G
Sbjct: 111 NG 112

>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)|
           (Estrogen-responsive finger protein) (Efp)
          Length = 634

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 19/67 (28%), Positives = 38/67 (56%)
 Frame = -1

Query: 434 RSLLTVGNSHLRQRIAALAQDKIFKDAHQEALKEEIERLRQLFHHQKIKATGGTDMATAT 255
           R+ LT+ +SH+     AL   +  +   Q+++K ++E+LRQ   + ++KA    D A  +
Sbjct: 202 RNKLTIMHSHINGATKALEDVRSKQQCVQDSMKRKMEQLRQ--EYMEMKAV--IDAAETS 257

Query: 254 SMQAKQE 234
           S++  +E
Sbjct: 258 SLRRLKE 264

>AF17_HUMAN (P55198) Protein AF-17|
          Length = 1093

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/76 (23%), Positives = 37/76 (48%)
 Frame = -1

Query: 443  DHQRSLLTVGNSHLRQRIAALAQDKIFKDAHQEALKEEIERLRQLFHHQKIKATGGTDMA 264
            + QR LL      L+Q    LA  ++  + HQ  + + I++++Q    Q+++  GG+ + 
Sbjct: 934  EQQRHLLQQQEQQLQQLQQLLASPQLTPE-HQTVVYQMIQQIQQKRELQRLQMAGGSQLP 992

Query: 263  TATSMQAKQELLMCEG 216
             A+ +      L+  G
Sbjct: 993  MASLLAGSSTPLLSAG 1008

>MDC1_MOUSE (Q5PSV9) Mediator of DNA damage checkpoint protein 1|
          Length = 1707

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
 Frame = -2

Query: 388  PPLHKTRSSKMLIKRHSKRRLSDYGNCSTTRRSRPQAAQTWPRPPQCRPSKSSLCVRE-- 215
            P +   RSS+M    HS   L     C T   ++P A++   RP + R ++SS    E  
Sbjct: 1004 PNVRPRRSSRMTPSPHSSAALKPNTTCPT---NQPAASRPTSRPTRGRANRSSTRTPELI 1060

Query: 214  ----PRCDSTTRRNQP 179
                P    +T   QP
Sbjct: 1061 VPVDPELQPSTSTEQP 1076

>LUXA_PHOLL (Q7N575) Alkanal monooxygenase alpha chain (EC 1.14.14.3)|
           (Bacterial luciferase alpha chain)
          Length = 359

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 55  GMSEHHMNKNNEHVKLHK 108
           GM+E +M  +NEH+K HK
Sbjct: 138 GMTEGYMEADNEHIKFHK 155

>PT1_BUCBP (Q89B04) Phosphoenolpyruvate-protein phosphotransferase (EC|
           2.7.3.9) (Phosphotransferase system, enzyme I)
          Length = 576

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -1

Query: 341 LKEEIERLRQLFHHQKI 291
           L+ E+E+L+QL HHQKI
Sbjct: 402 LQYELEKLKQLLHHQKI 418

>ATS18_HUMAN (Q8TE60) ADAMTS-18 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 18) (ADAM-TS
            18) (ADAM-TS18)
          Length = 1221

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
 Frame = -2

Query: 253  QCRPSKSSLCVREPR---------CDSTTRRNQPFCVDFLH--SLISIHRVETHQCY 116
            Q RPS S L  ++P          C +  +R  P CVDF +   L+  H V  H+ Y
Sbjct: 1153 QGRPSSSCLLHQKPPVLRACNTNFCPAPEKREDPSCVDFFNWCHLVPQHGVCNHKFY 1209

>TS1R2_HUMAN (Q8TE23) Taste receptor type 1 member 2 precursor (G-protein|
           coupled receptor 71) (Sweet taste receptor T1R2)
          Length = 839

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
 Frame = -2

Query: 307 STTRRSRPQAAQTWPRPPQCRPSKSSLCVREPRCDSTTRRNQPFCVDFLHSLISIHRVE- 131
           S  R   PQA      PP  R S+S  C +E  CD+        C++   S  +I R+  
Sbjct: 336 SEFREWGPQAGP----PPLSRTSQSYTCNQE--CDN--------CLNATLSFNTILRLSG 381

Query: 130 ---THQCY*IICAV*H-VHCFCSCDVHSSLSIIVLGWEIVVDIY 11
               +  Y  + AV H +H    CD  +    +V  W+++ +I+
Sbjct: 382 ERVVYSVYSAVYAVAHALHSLLGCDKSTCTKRVVYPWQLLEEIW 425

>LUXA2_PHOLU (P23146) Alkanal monooxygenase alpha chain (EC 1.14.14.3)|
           (Bacterial luciferase alpha chain)
          Length = 362

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 55  GMSEHHMNKNNEHVKLHK 108
           GM+E +M  +NEH+K HK
Sbjct: 138 GMTEGYMEADNEHIKFHK 155

>LUXA1_PHOLU (P19839) Alkanal monooxygenase alpha chain (EC 1.14.14.3)|
           (Bacterial luciferase alpha chain)
          Length = 360

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 55  GMSEHHMNKNNEHVKLHK 108
           GM+E +M  +NEH+K HK
Sbjct: 138 GMTEGYMEADNEHIKFHK 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,179,475
Number of Sequences: 219361
Number of extensions: 1215490
Number of successful extensions: 3907
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3899
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)