| Clone Name | rbast77h12 |
|---|---|
| Clone Library Name | barley_pub |
>APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 33.5 bits (75), Expect = 0.13 Identities = 15/16 (93%), Positives = 15/16 (93%) Frame = -2 Query: 373 YAEAHLKLSELGFGEA 326 YAEAHLKLSELGF EA Sbjct: 234 YAEAHLKLSELGFAEA 249
>APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb)| Length = 251 Score = 32.0 bits (71), Expect = 0.37 Identities = 14/15 (93%), Positives = 14/15 (93%) Frame = -2 Query: 373 YAEAHLKLSELGFGE 329 YAEAHLKLSELGF E Sbjct: 236 YAEAHLKLSELGFAE 250
>APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 31.6 bits (70), Expect = 0.49 Identities = 13/16 (81%), Positives = 15/16 (93%) Frame = -2 Query: 373 YAEAHLKLSELGFGEA 326 YAEAH+KLSELGF +A Sbjct: 234 YAEAHMKLSELGFADA 249
>APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11.1.11) (APXa)| Length = 249 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = -2 Query: 373 YAEAHLKLSELGFGEA 326 Y EAHLKLSELGF +A Sbjct: 234 YKEAHLKLSELGFADA 249
>APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11)| Length = 291 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -2 Query: 373 YAEAHLKLSELGFGEASEG 317 YAE+H KLSELGF S G Sbjct: 232 YAESHKKLSELGFTPRSSG 250
>THA11_MOUSE (Q9JJD0) THAP domain-containing protein 11| Length = 305 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = -2 Query: 166 IWIRSVGRWGVALFCF*RLVSCDGPA-CSVN----R*VLCSSFPVVFPCRGRNEKK 14 +W+++V R GV+ CF G CSV+ R P +FP RG NE+K Sbjct: 35 LWLKNVSRAGVS-GCFSTFQPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERK 89
>THA11_HUMAN (Q96EK4) THAP domain-containing protein 11| Length = 313 Score = 28.5 bits (62), Expect = 4.1 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = -2 Query: 166 IWIRSVGRWGVALFCF*RLVSCDGPA-CSVN----R*VLCSSFPVVFPCRGRNEKK 14 +W+++V R GV+ CF G CSV+ R P +FP RG NE+K Sbjct: 35 LWLKNVSRAGVS-GCFSTFQPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERK 89
>ZG42_XENLA (P18720) Gastrula zinc finger protein XLCGF42.1 (Fragment)| Length = 168 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Frame = +2 Query: 20 FISSSTGK--NNRKGTT*HLAVHTTSRSITRYEASKAKQCNT 139 F S GK R G T HL +HT + T E K C T Sbjct: 90 FSCSECGKCFTRRSGLTAHLRIHTGEKPYTCTECGKCFTCRT 131
>LEU2_RHOPA (Q6ND69) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 469 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +2 Query: 134 NTPSTDRSNPNPD 172 N P+TDRS PNPD Sbjct: 67 NVPTTDRSKPNPD 79
>LEU2_NITWN (Q3SNV3) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 468 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +2 Query: 134 NTPSTDRSNPNPD 172 N P+TDRS PNPD Sbjct: 66 NVPTTDRSKPNPD 78
>YM96_YEAST (Q04893) Hypothetical 113.1 kDa protein in PRE5-FET4 intergenic| region Length = 1140 Score = 27.3 bits (59), Expect = 9.2 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%) Frame = +2 Query: 23 ISSSTGKNNRKGTT*HLAVHTTSRSI---TRYEASKAKQ 130 +SSST K NR T A+H TS S T Y S AK+ Sbjct: 1080 LSSSTEKVNRSTTKPTAAIHGTSSSAKQSTTYTVSTAKE 1118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,698,361 Number of Sequences: 219361 Number of extensions: 711960 Number of successful extensions: 1798 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1755 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1796 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)