ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast77f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY093953.1| Triticum aestivum biostress-resistance-related pr... 585 e-164
2ref|NM_191595.2| Oryza sativa (japonica cultivar-group), mRNA 131 2e-27
3dbj|AK101698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
4dbj|AK061797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
5dbj|AK106131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
6ref|XM_550302.1| Oryza sativa (japonica cultivar-group), mRNA 109 7e-21
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
8dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
9gb|AY109240.1| Zea mays PCO097762 mRNA sequence 60 6e-06
10ref|NM_001036832.1| Arabidopsis thaliana carboxylic ester hydrol... 52 0.001
11ref|NM_203086.1| Arabidopsis thaliana carboxylic ester hydrolase... 52 0.001
12ref|NM_122013.2| Arabidopsis thaliana carboxylic ester hydrolase... 52 0.001
13gb|BT000428.1| Arabidopsis thaliana putative protein (At5g20060)... 52 0.001
14emb|BX829959.1|CNS0A09P Arabidopsis thaliana Full-length cDNA Co... 52 0.001
15emb|BX831942.1|CNS09ZOF Arabidopsis thaliana Full-length cDNA Co... 52 0.001
16gb|AY088171.1| Arabidopsis thaliana clone 42475 mRNA, complete s... 52 0.001
17gb|BT001175.1| Arabidopsis thaliana putative protein (At5g20060)... 52 0.001
18gb|AC124664.14| Mus musculus chromosome 1, clone RP23-103B18, co... 42 1.4
19gb|AC115896.9| Mus musculus chromosome 1, clone RP24-443M8, comp... 42 1.4
20ref|XM_843489.1| PREDICTED: Canis familiaris similar to cleavage... 42 1.4
21ref|XM_851362.1| PREDICTED: Canis familiaris similar to cleavage... 42 1.4
22ref|XM_851321.1| PREDICTED: Canis familiaris similar to cleavage... 42 1.4
23ref|XM_537353.2| PREDICTED: Canis familiaris similar to cleavage... 42 1.4
24emb|AL133243.3|CNS01DUG BAC sequence from the SPG4 candidate reg... 42 1.4
25ref|NM_197139.1| Oryza sativa (japonica cultivar-group) putative... 40 5.6
26ref|XM_426495.1| PREDICTED: Gallus gallus truncated dystrophin (... 40 5.6
27gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, co... 40 5.6
28ref|NM_201407.1| Mus musculus DENN/MADD domain containing 4B (De... 40 5.6
29gb|AY512564.1| Mus musculus brain specific protein 4 mRNA, compl... 40 5.6
30gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, com... 40 5.6
31emb|AL356430.19| Human DNA sequence from clone RP11-467B13 on ch... 40 5.6
32emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on ch... 40 5.6
33gb|AC112215.3| Homo sapiens chromosome 3 clone RP11-844E22, comp... 40 5.6
34gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, comp... 40 5.6
35dbj|AK155638.1| Mus musculus B6-derived CD11 +ve dendritic cells... 40 5.6
36gb|BC066102.1| Mus musculus DENN/MADD domain containing 4B, mRNA... 40 5.6
37gb|BC040460.1| Mus musculus DENN/MADD domain containing 4B, mRNA... 40 5.6
38gb|BC049972.1| Mus musculus DENN/MADD domain containing 4B, mRNA... 40 5.6
39gb|BC026996.1| Mus musculus DENN/MADD domain containing 4B, mRNA... 40 5.6
40gb|AY707910.1| Thalassophryne nattereri natterin 3 precursor, mR... 40 5.6
41ref|NM_063932.3| Caenorhabditis elegans M106.2 (M106.2) mRNA, co... 40 5.6
42gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone m... 40 5.6
43gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, R... 40 5.6
44dbj|AK122294.1| Mus musculus mRNA for mKIAA0476 protein 40 5.6
45dbj|AK067532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
46gb|AC006208.3| Homo sapiens 3 PAC RP4-793P23 (Roswell Park Cance... 40 5.6
47emb|Z46935.2|CEM106 Caenorhabditis elegans Cosmid M106, complete... 40 5.6
48emb|CR847939.13| Zebrafish DNA sequence from clone CH211-262I1 i... 40 5.6
49emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on ch... 40 5.6 
>gb|AY093953.1| Triticum aestivum biostress-resistance-related protein mRNA, partial
            cds
          Length = 1265

 Score =  585 bits (295), Expect = e-164
 Identities = 384/410 (93%), Gaps = 4/410 (0%)
 Strand = Plus / Minus

                                                                        
Query: 9    acacataccaaatttatggaaatctcaagagtaccaagattcagtaaagcatgtctgcat 68
            ||||||||||||| |||| |||| |||| |||||||||||||||  | ||||||| ||||
Sbjct: 1182 acacataccaaatatatg-aaatttcaatagtaccaagattcagcgaggcatgtccgcat 1124

                                                                        
Query: 69   atgaaatgccaagctaagacatgaccgtatacccaaagcccaagttggctatccaaccat 128
            |||||| ||||||||||||||| |||||||||||||||||||||||||| | | | ||||
Sbjct: 1123 atgaaacgccaagctaagacataaccgtatacccaaagcccaagttggcaaccaagccat 1064

                                                                        
Query: 129  tttatcactcaatttcggcacaaccacaggtacttatattatttagacgccgctacaacg 188
            |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||  |
Sbjct: 1063 tttatcactcaatt-cggcacaaccacaggtacttat--tatttagacgccgctacactg 1007

                                                                        
Query: 189  agcccttttcaaggcatctcttcattcaatcaagttgacgaggaactgccaagttccaag 248
            |||| || ||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 1006 agcctttctcaaggcatctcttcattcaatcaagttgacgatgaactgccgagttccaag 947

                                                                        
Query: 249  cttgccgtaagccacttgacgacttcgtccatctcctctggaacggtatagtgcccgagc 308
            ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 946  cttgctgtaagccacttgacaacttcgtccatctcctctggaacggtatagtgcccgagt 887

                                                                        
Query: 309  ctgctgtaggacttgaattccacatttgcaaacccggttgacttaagtgcatcagcagat 368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886  ctgctgtaggacttgaattccacatttgcaaacccggttgacttaagtgcatcagcagat 827

                                                              
Query: 369  ctctctccatgtttgtagaggaccacatcatcagcttttccatgacaaag 418
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826  ctctctccatgtttgtagaggaccacatcatcagcttttccatgacaaag 777
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>ref|NM_191595.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1285

 Score =  131 bits (66), Expect = 2e-27
 Identities = 129/150 (86%)
 Strand = Plus / Minus

                                                                       
Query: 269 gacttcgtccatctcctctggaacggtatagtgcccgagcctgctgtaggacttgaattc 328
           |||||| ||||||||||| ||||| || ||||| || || ||| |||||||||||||  |
Sbjct: 881 gacttcatccatctcctccggaacagtgtagtgtccaagtctgttgtaggacttgaacac 822

                                                                       
Query: 329 cacatttgcaaacccggttgacttaagtgcatcagcagatctctctccatgtttgtagag 388
           |||||||| ||| || |||| ||| ||||| ||||||||| |||| ||||| ||||||||
Sbjct: 821 cacatttgaaaatccagttgtcttcagtgcgtcagcagatttctcaccatgcttgtagag 762

                                         
Query: 389 gaccacatcatcagcttttccatgacaaag 418
            || ||||||||||||||||||||||||||
Sbjct: 761 aactacatcatcagcttttccatgacaaag 732
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>dbj|AK101698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060D21, full
            insert sequence
          Length = 1453

 Score =  131 bits (66), Expect = 2e-27
 Identities = 129/150 (86%)
 Strand = Plus / Minus

                                                                        
Query: 269  gacttcgtccatctcctctggaacggtatagtgcccgagcctgctgtaggacttgaattc 328
            |||||| ||||||||||| ||||| || ||||| || || ||| |||||||||||||  |
Sbjct: 1048 gacttcatccatctcctccggaacagtgtagtgtccaagtctgttgtaggacttgaacac 989

                                                                        
Query: 329  cacatttgcaaacccggttgacttaagtgcatcagcagatctctctccatgtttgtagag 388
            |||||||| ||| || |||| ||| ||||| ||||||||| |||| ||||| ||||||||
Sbjct: 988  cacatttgaaaatccagttgtcttcagtgcgtcagcagatttctcaccatgcttgtagag 929

                                          
Query: 389  gaccacatcatcagcttttccatgacaaag 418
             || ||||||||||||||||||||||||||
Sbjct: 928  aactacatcatcagcttttccatgacaaag 899
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>dbj|AK061797.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G08, full
           insert sequence
          Length = 1285

 Score =  131 bits (66), Expect = 2e-27
 Identities = 129/150 (86%)
 Strand = Plus / Minus

                                                                       
Query: 269 gacttcgtccatctcctctggaacggtatagtgcccgagcctgctgtaggacttgaattc 328
           |||||| ||||||||||| ||||| || ||||| || || ||| |||||||||||||  |
Sbjct: 881 gacttcatccatctcctccggaacagtgtagtgtccaagtctgttgtaggacttgaacac 822

                                                                       
Query: 329 cacatttgcaaacccggttgacttaagtgcatcagcagatctctctccatgtttgtagag 388
           |||||||| ||| || |||| ||| ||||| ||||||||| |||| ||||| ||||||||
Sbjct: 821 cacatttgaaaatccagttgtcttcagtgcgtcagcagatttctcaccatgcttgtagag 762

                                         
Query: 389 gaccacatcatcagcttttccatgacaaag 418
            || ||||||||||||||||||||||||||
Sbjct: 761 aactacatcatcagcttttccatgacaaag 732
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>dbj|AK106131.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F11, full
           insert sequence
          Length = 1200

 Score =  111 bits (56), Expect = 2e-21
 Identities = 113/132 (85%)
 Strand = Plus / Minus

                                                                       
Query: 287 tggaacggtatagtgcccgagcctgctgtaggacttgaattccacatttgcaaacccggt 346
           |||||| || ||||| || || ||| |||||||||||||  ||||||||| ||| || ||
Sbjct: 889 tggaacagtgtagtgtccaagtctgttgtaggacttgaacaccacatttgaaaatccagt 830

                                                                       
Query: 347 tgacttaagtgcatcagcagatctctctccatgtttgtagaggaccacatcatcagcttt 406
           || ||| ||||| ||||||||| |||| ||||| |||||||| || ||||||||||||||
Sbjct: 829 tgtcttcagtgcgtcagcagatttctcaccatgcttgtagagaactacatcatcagcttt 770

                       
Query: 407 tccatgacaaag 418
           ||||||||||||
Sbjct: 769 tccatgacaaag 758
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>ref|XM_550302.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1184

 Score =  109 bits (55), Expect = 7e-21
 Identities = 97/111 (87%)
 Strand = Plus / Minus

                                                                       
Query: 308 cctgctgtaggacttgaattccacatttgcaaacccggttgacttaagtgcatcagcaga 367
           |||| |||||||||||||  ||||||||| ||| || |||| ||| ||||| ||||||||
Sbjct: 868 cctgttgtaggacttgaacaccacatttgaaaatccagttgtcttcagtgcgtcagcaga 809

                                                              
Query: 368 tctctctccatgtttgtagaggaccacatcatcagcttttccatgacaaag 418
           | |||| ||||| |||||||| || ||||||||||||||||||||||||||
Sbjct: 808 tttctcaccatgcttgtagagaactacatcatcagcttttccatgacaaag 758
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                           
Query: 308     cctgctgtaggacttgaattccacatttgcaaacccggttgacttaagtgcatcagcaga 367
               |||| |||||||||||||  ||||||||| ||| || |||| ||| ||||| ||||||||
Sbjct: 3845802 cctgttgtaggacttgaacaccacatttgaaaatccagttgtcttcagtgcgtcagcaga 3845861

                                                    
Query: 368     tctctctccatgtttgtagaggaccacatcatcagct 404
               | |||| ||||| |||||||| || ||||||||||||
Sbjct: 3845862 tttctcaccatgcttgtagagaactacatcatcagct 3845898
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>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0089K24
          Length = 154137

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                          
Query: 308    cctgctgtaggacttgaattccacatttgcaaacccggttgacttaagtgcatcagcaga 367
              |||| |||||||||||||  ||||||||| ||| || |||| ||| ||||| ||||||||
Sbjct: 119344 cctgttgtaggacttgaacaccacatttgaaaatccagttgtcttcagtgcgtcagcaga 119403

                                                   
Query: 368    tctctctccatgtttgtagaggaccacatcatcagct 404
              | |||| ||||| |||||||| || ||||||||||||
Sbjct: 119404 tttctcaccatgcttgtagagaactacatcatcagct 119440
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>gb|AY109240.1| Zea mays PCO097762 mRNA sequence
          Length = 1400

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 117/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 270  acttcgtccatctcctctggaacggtatagtgcccgagcctgctgtaggacttgaattcc 329
            ||||| ||||||||||||||||| || |||||||| || ||  |||| | ||||||   |
Sbjct: 1051 acttcatccatctcctctggaacagtgtagtgcccaagactattgtatgccttgaagagc 992

                                                                        
Query: 330  acatttgcaaacccggttgacttaagtgcatcagcagatctctctccatgtttgtagagg 389
            ||||| | ||| ||  ||| ||| |  ||| ||||||||||||| || || ||||||   
Sbjct: 991  acattggaaaagccatttgccttcaaggcaccagcagatctctccccgtgcttgtaggca 932

                                      
Query: 390  accacatcatcagcttttccatgaca 415
            || |||||||||||||||||||||||
Sbjct: 931  actacatcatcagcttttccatgaca 906
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>ref|NM_001036832.1| Arabidopsis thaliana carboxylic ester hydrolase AT5G20060
           transcript variant AT5G20060.3 mRNA, complete cds
          Length = 1158

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 390 accacatcatcagcttttccatgaca 415
           ||||||||||||||||||||||||||
Sbjct: 831 accacatcatcagcttttccatgaca 806
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>ref|NM_203086.1| Arabidopsis thaliana carboxylic ester hydrolase AT5G20060 transcript
            variant AT5G20060.2 mRNA, complete cds
          Length = 1461

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 390  accacatcatcagcttttccatgaca 415
            ||||||||||||||||||||||||||
Sbjct: 1163 accacatcatcagcttttccatgaca 1138
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>ref|NM_122013.2| Arabidopsis thaliana carboxylic ester hydrolase AT5G20060
           transcript variant AT5G20060.1 mRNA, complete cds
          Length = 1012

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 390 accacatcatcagcttttccatgaca 415
           ||||||||||||||||||||||||||
Sbjct: 714 accacatcatcagcttttccatgaca 689
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>gb|BT000428.1| Arabidopsis thaliana putative protein (At5g20060) mRNA, complete
           cds
          Length = 992

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 390 accacatcatcagcttttccatgaca 415
           ||||||||||||||||||||||||||
Sbjct: 694 accacatcatcagcttttccatgaca 669
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>emb|BX829959.1|CNS0A09P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB49ZG02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 665

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 390 accacatcatcagcttttccatgaca 415
           ||||||||||||||||||||||||||
Sbjct: 384 accacatcatcagcttttccatgaca 359
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>emb|BX831942.1|CNS09ZOF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH40ZD11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1372

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 390  accacatcatcagcttttccatgaca 415
            ||||||||||||||||||||||||||
Sbjct: 1163 accacatcatcagcttttccatgaca 1138
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>gb|AY088171.1| Arabidopsis thaliana clone 42475 mRNA, complete sequence
          Length = 1011

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 390 accacatcatcagcttttccatgaca 415
           ||||||||||||||||||||||||||
Sbjct: 713 accacatcatcagcttttccatgaca 688
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>gb|BT001175.1| Arabidopsis thaliana putative protein (At5g20060) mRNA, complete
           cds
          Length = 832

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 390 accacatcatcagcttttccatgaca 415
           ||||||||||||||||||||||||||
Sbjct: 599 accacatcatcagcttttccatgaca 574
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>gb|AC124664.14| Mus musculus chromosome 1, clone RP23-103B18, complete sequence
          Length = 220456

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 207   tcttcattcaatcaagttgac 227
             |||||||||||||||||||||
Sbjct: 35172 tcttcattcaatcaagttgac 35192
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>gb|AC115896.9| Mus musculus chromosome 1, clone RP24-443M8, complete sequence
          Length = 203303

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   tcttcattcaatcaagttgac 227
             |||||||||||||||||||||
Sbjct: 34749 tcttcattcaatcaagttgac 34729
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>ref|XM_843489.1| PREDICTED: Canis familiaris similar to cleavage and polyadenylation
            specific factor 2, transcript variant 2 (LOC480230), mRNA
          Length = 2750

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 194  ttttcaaggcatctcttcattcaat 218
            ||||||||| |||||||||||||||
Sbjct: 1009 ttttcaagggatctcttcattcaat 1033
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>ref|XM_851362.1| PREDICTED: Canis familiaris similar to cleavage and polyadenylation
            specific factor 2, transcript variant 4 (LOC480230), mRNA
          Length = 2615

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 194  ttttcaaggcatctcttcattcaat 218
            ||||||||| |||||||||||||||
Sbjct: 1009 ttttcaagggatctcttcattcaat 1033
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>ref|XM_851321.1| PREDICTED: Canis familiaris similar to cleavage and polyadenylation
            specific factor 2, transcript variant 3 (LOC480230), mRNA
          Length = 2645

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 194  ttttcaaggcatctcttcattcaat 218
            ||||||||| |||||||||||||||
Sbjct: 1009 ttttcaagggatctcttcattcaat 1033
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>ref|XM_537353.2| PREDICTED: Canis familiaris similar to cleavage and polyadenylation
            specific factor 2, transcript variant 1 (LOC480230), mRNA
          Length = 2768

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 194  ttttcaaggcatctcttcattcaat 218
            ||||||||| |||||||||||||||
Sbjct: 1009 ttttcaagggatctcttcattcaat 1033
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>emb|AL133243.3|CNS01DUG BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 559D11 of
             library RPCI-11 from chromosome 2 of Homo sapiens (Human)
          Length = 166318

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    tttatggaaatctcaagagta 41
             |||||||||||||||||||||
Sbjct: 70794 tttatggaaatctcaagagta 70774
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>ref|NM_197139.1| Oryza sativa (japonica cultivar-group) putative alpha-galactosidase
           (OSJNBa0051D19.18), mRNA
          Length = 1242

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 335 tgcaaacccggttgacttaagtgcatcagcag 366
           ||||| ||||||||||  ||||||||||||||
Sbjct: 240 tgcaagcccggttgacacaagtgcatcagcag 209
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>ref|XM_426495.1| PREDICTED: Gallus gallus truncated dystrophin (LOC395580), mRNA
          Length = 4122

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 ggcacaaccacaggtactta 164
           ||||||||||||||||||||
Sbjct: 493 ggcacaaccacaggtactta 512
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>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence
          Length = 205291

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     aatgccaagctaagacatga 92
              ||||||||||||||||||||
Sbjct: 174881 aatgccaagctaagacatga 174862
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>ref|NM_201407.1| Mus musculus DENN/MADD domain containing 4B (Dennd4b), mRNA
          Length = 4308

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   aatgccaagctaagacatga 92
            ||||||||||||||||||||
Sbjct: 3932 aatgccaagctaagacatga 3913
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>gb|AY512564.1| Mus musculus brain specific protein 4 mRNA, complete cds
          Length = 4308

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   aatgccaagctaagacatga 92
            ||||||||||||||||||||
Sbjct: 3932 aatgccaagctaagacatga 3913
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>gb|AC118632.7| Mus musculus chromosome 18, clone RP24-94D24, complete sequence
          Length = 198636

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tatgaaatgccaagctaaga 87
              ||||||||||||||||||||
Sbjct: 121165 tatgaaatgccaagctaaga 121184
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>emb|AL356430.19| Human DNA sequence from clone RP11-467B13 on chromosome 13 Contains
             part of the NBEA gene for neurobeachin (BCL8B FLJ10197
             KIAA1544) and a pseudogene similar to part og a noveln
             proteon (KIAA1925), complete sequence
          Length = 170885

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   aggtacttatattatttaga 175
             ||||||||||||||||||||
Sbjct: 18785 aggtacttatattatttaga 18766
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>emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on chromosome 9 Contains the
             5' end of a novel gene (CGI-67), a novel gene, a novel
             gene (LOC138240) and a CpG island, complete sequence
          Length = 195844

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    atatgaaatgccaagctaag 86
             ||||||||||||||||||||
Sbjct: 52502 atatgaaatgccaagctaag 52521
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>gb|AC112215.3| Homo sapiens chromosome 3 clone RP11-844E22, complete sequence
          Length = 199310

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   gaggaccacatcatcagctt 405
             ||||||||||||||||||||
Sbjct: 25391 gaggaccacatcatcagctt 25410
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>gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, complete sequence
          Length = 217029

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   gaggaccacatcatcagctt 405
             ||||||||||||||||||||
Sbjct: 17027 gaggaccacatcatcagctt 17046
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>dbj|AK155638.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F730101M12
            product:Similar to calmodulin-binding protein related to
            a Rab3 GDP/GTP exchange protein (Fragment), full insert
            sequence
          Length = 5386

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   aatgccaagctaagacatga 92
            ||||||||||||||||||||
Sbjct: 4342 aatgccaagctaagacatga 4323
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>gb|BC066102.1| Mus musculus DENN/MADD domain containing 4B, mRNA (cDNA clone
            IMAGE:30531856), partial cds
          Length = 4871

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   aatgccaagctaagacatga 92
            ||||||||||||||||||||
Sbjct: 3794 aatgccaagctaagacatga 3775
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>gb|BC040460.1| Mus musculus DENN/MADD domain containing 4B, mRNA (cDNA clone
            IMAGE:4208326), partial cds
          Length = 3488

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   aatgccaagctaagacatga 92
            ||||||||||||||||||||
Sbjct: 2407 aatgccaagctaagacatga 2388
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>gb|BC049972.1| Mus musculus DENN/MADD domain containing 4B, mRNA (cDNA clone
            IMAGE:4187596), partial cds
          Length = 3721

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   aatgccaagctaagacatga 92
            ||||||||||||||||||||
Sbjct: 2646 aatgccaagctaagacatga 2627
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>gb|BC026996.1| Mus musculus DENN/MADD domain containing 4B, mRNA (cDNA clone
            IMAGE:5365056), partial cds
          Length = 2284

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   aatgccaagctaagacatga 92
            ||||||||||||||||||||
Sbjct: 1210 aatgccaagctaagacatga 1191
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>gb|AY707910.1| Thalassophryne nattereri natterin 3 precursor, mRNA, complete cds
          Length = 1257

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   agcatgtctgcatatgaaat 75
            ||||||||||||||||||||
Sbjct: 1143 agcatgtctgcatatgaaat 1162
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>ref|NM_063932.3| Caenorhabditis elegans M106.2 (M106.2) mRNA, complete cds
          Length = 1772

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 agtgcccgagcctgctgtag 317
           ||||||||||||||||||||
Sbjct: 533 agtgcccgagcctgctgtag 514
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>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete
              sequence
          Length = 196824

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     aatgccaagctaagacatga 92
              ||||||||||||||||||||
Sbjct: 145148 aatgccaagctaagacatga 145129
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>gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, RP23-145I16, complete
              sequence
          Length = 229553

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    gaactgccaagttccaagct 250
              ||||||||||||||||||||
Sbjct: 141059 gaactgccaagttccaagct 141040
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>dbj|AK122294.1| Mus musculus mRNA for mKIAA0476 protein
          Length = 4878

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   aatgccaagctaagacatga 92
            ||||||||||||||||||||
Sbjct: 3819 aatgccaagctaagacatga 3800
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>dbj|AK067532.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108A09, full
           insert sequence
          Length = 1518

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 335 tgcaaacccggttgacttaagtgcatcagcag 366
           ||||| ||||||||||  ||||||||||||||
Sbjct: 294 tgcaagcccggttgacacaagtgcatcagcag 263
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>gb|AC006208.3| Homo sapiens 3 PAC RP4-793P23 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 123943

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 386   gaggaccacatcatcagctt 405
             ||||||||||||||||||||
Sbjct: 83908 gaggaccacatcatcagctt 83927
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>emb|Z46935.2|CEM106 Caenorhabditis elegans Cosmid M106, complete sequence
          Length = 39973

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   agtgcccgagcctgctgtag 317
             ||||||||||||||||||||
Sbjct: 14514 agtgcccgagcctgctgtag 14533
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>emb|CR847939.13| Zebrafish DNA sequence from clone CH211-262I1 in linkage group 11,
             complete sequence
          Length = 181988

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   aagtgcatcagcagatctct 372
             ||||||||||||||||||||
Sbjct: 97238 aagtgcatcagcagatctct 97219
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>emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on chromosome 7, complete
             sequence
          Length = 148047

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   gaactgccaagttccaagct 250
             ||||||||||||||||||||
Sbjct: 90241 gaactgccaagttccaagct 90260


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,601,933
Number of Sequences: 3902068
Number of extensions: 3601933
Number of successful extensions: 69545
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69447
Number of HSP's gapped (non-prelim): 95
length of query: 418
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 396
effective length of database: 17,147,199,772
effective search space: 6790291109712
effective search space used: 6790291109712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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