ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast77d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SPA9_MOUSE (Q9D7D2) Serpin A9 precursor 31 0.66
2ENH5_HUMAN (P61549) HERV-H_19p13.11 provirus ancestral Env polyp... 27 9.6
3FASTK_MOUSE (Q9JIX9) Fas-activated serine/threonine kinase (EC 2... 27 9.6

>SPA9_MOUSE (Q9D7D2) Serpin A9 precursor|
          Length = 418

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 23  IQAKYRCNSNFSGLQKTHFFNISTAFH 103
           I+  +  N++FSG+ KTHF  +S A H
Sbjct: 329 IRDAFNSNADFSGITKTHFLQVSKAAH 355



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>ENH5_HUMAN (P61549) HERV-H_19p13.11 provirus ancestral Env polyprotein|
           precursor (Envelope polyprotein) (Env protein RGH1) (Env
           protein RTLV-H) [Includes: Surface protein (SU)]
          Length = 369

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = -1

Query: 316 GRSEPCLCIHPLLSFSYLKSENKPWYARPFSTLVMICCALHDGENKIERGVLYDESCMVI 137
           GR  PC+ +HP L  S   S++ P   RP S L+     +   EN  ER +L D  C +I
Sbjct: 216 GRHLPCISLHPWLP-SPCSSDSPP---RPSSRLL-----IPSPENNSER-LLIDTQCFLI 265



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>FASTK_MOUSE (Q9JIX9) Fas-activated serine/threonine kinase (EC 2.7.11.8) (FAST|
           kinase)
          Length = 511

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 178 IERGVLYDESCMVIRFCTSLDVHSRVKC 95
           +E+  L D S ++IR C S DVH+   C
Sbjct: 96  VEQATLQDLSQLIIRNCPSFDVHTIHVC 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,277,772
Number of Sequences: 219361
Number of extensions: 916825
Number of successful extensions: 2013
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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