ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast77a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|BX914196.10| Zebrafish DNA sequence from clone DKEYP-71E8 in... 44 0.36
2emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in ... 44 0.36
3gb|AC090017.18| Homo sapiens 12q BAC RP11-471N19 (Roswell Park C... 42 1.4
4emb|BX005272.6| Zebrafish DNA sequence from clone DKEY-23D7, com... 42 1.4
5gb|AC161193.3| Mus musculus chromosome 8, clone RP23-308L22, com... 40 5.7
6gb|AC112964.8| Mus musculus chromosome 8, clone RP24-82M4, compl... 40 5.7
7gb|AC120889.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
8gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
9ref|NM_003410.2| Homo sapiens zinc finger protein, X-linked (ZFX... 40 5.7
10gb|AC122326.4| Mus musculus BAC clone RP23-337J18 from chromosom... 40 5.7
11emb|BX649356.19| Zebrafish DNA sequence from clone CH211-209H5 i... 40 5.7
12emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in... 40 5.7
13emb|CR385077.11| Zebrafish DNA sequence from clone CH211-262M14 ... 40 5.7
14gb|AC073237.3| Homo sapiens BAC clone RP11-792I5 from 7, complet... 40 5.7
15gb|AC144511.1| Pan troglodytes BAC clone RP43-45C15 from 7, comp... 40 5.7
16emb|BX640465.7| Zebrafish DNA sequence from clone CH211-198B21 i... 40 5.7
17emb|CR391949.7| Zebrafish DNA sequence from clone CH211-149B20 i... 40 5.7
18emb|BX530056.17| Zebrafish DNA sequence from clone CH211-208I16 ... 40 5.7
19emb|AL357127.17| Human DNA sequence from clone RP11-282I1 on chr... 40 5.7
20emb|AL157407.11| Human DNA sequence from clone RP4-609E1 on chro... 40 5.7
21emb|X59739.1|HSZFX2 Human ZFX mRNA for put. transcription activa... 40 5.7
22emb|AL035592.1|SPCC1393 S.pombe chromosome III cosmid c1393 40 5.7
23emb|AL023518.2|SPCC1020 S.pombe chromosome III cosmid c1020 40 5.7
24emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in ... 40 5.7
25emb|BX511186.13| Zebrafish DNA sequence from clone DKEY-246J23 i... 40 5.7
26emb|BX510906.21| Zebrafish DNA sequence from clone CH211-203M24 ... 40 5.7
27emb|BX546500.7| Zebrafish DNA sequence from clone DKEY-15L19 in ... 40 5.7
28gb|BC030756.2| Homo sapiens cDNA clone IMAGE:4797449 40 5.7
29emb|BX284673.9| Zebrafish DNA sequence from clone DKEY-71P21 in ... 40 5.7
30emb|BX682550.7| Zebrafish DNA sequence from clone DKEY-93N13 in ... 40 5.7
31ref|NM_136727.2| Drosophila melanogaster CAP CG18408-RA, transcr... 40 5.7
32gb|AC079880.6| Homo sapiens BAC clone RP11-453E17 from 4, comple... 40 5.7
33gb|AF448043.1|AF448043 Pseudomonas sp. SOD-3 16S ribosomal RNA g... 40 5.7
34gb|AC026696.5| Homo sapiens chromosome 5 clone CTC-348L14, compl... 40 5.7
35emb|BX682548.7| Zebrafish DNA sequence from clone DKEY-94A14 in ... 40 5.7
36gb|AC016568.5| Homo sapiens chromosome 5 clone CTC-566C5, comple... 40 5.7
37gb|AC007417.5| Drosophila melanogaster, chromosome 2R, region 47... 40 5.7
38ref|NM_001022950.1| Schizosaccharomyces pombe 972h- P-type proto... 40 5.7
39emb|BX276087.14| Zebrafish DNA sequence from clone CH211-270M20 ... 40 5.7
40emb|BX890610.8| Zebrafish DNA sequence from clone DKEY-122C9, co... 40 5.7
41dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
42gb|AC175706.2| Mus musculus BAC clone RP24-307B22 from chromosom... 40 5.7
43emb|BX571790.8| Zebrafish DNA sequence from clone CH211-199M3 in... 40 5.7
44emb|BX601646.5| Zebrafish DNA sequence from clone CH211-204J16 i... 40 5.7
45emb|BX470188.11| Zebrafish DNA sequence from clone DKEY-206F10 i... 40 5.7
46emb|AL732386.13| Zebrafish DNA sequence from clone XX-35D8 in li... 40 5.7
47emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, co... 40 5.7
48gb|AE003830.3| Drosophila melanogaster chromosome 2R, section 20... 40 5.7
49emb|CR407543.6| Zebrafish DNA sequence from clone CH211-63M22 in... 40 5.7
50gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome... 40 5.7
51dbj|AB053478.1| Drosophila melanogaster dcp mRNA for DCAPL1, com... 40 5.7
52gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
53gb|AC002404.1|AC002404 Human Chromosome X PAC RPCI1-290C9 from t... 40 5.7
54emb|AL954771.5| Zebrafish DNA sequence from clone CH211-220B15 i... 40 5.7
55dbj|AB209892.1| Homo sapiens mRNA for X-linked zinc finger prote... 40 5.7
56gb|M60471.1|YSPPMA2A S.pombe H+-ATPase (pma2) gene, complete cds 40 5.7

>emb|BX914196.10| Zebrafish DNA sequence from clone DKEYP-71E8 in linkage group 7,
             complete sequence
          Length = 166715

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 352   tagatccatgctttgatgttgt 373
             ||||||||||||||||||||||
Sbjct: 53611 tagatccatgctttgatgttgt 53590



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>emb|BX004988.5| Zebrafish DNA sequence from clone CH211-79C4 in linkage group 14,
             complete sequence
          Length = 166194

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 352   tagatccatgctttgatgttgt 373
             ||||||||||||||||||||||
Sbjct: 65806 tagatccatgctttgatgttgt 65785



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>gb|AC090017.18| Homo sapiens 12q BAC RP11-471N19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 196962

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 102   actacaacacttcacacattttaca 126
             |||||||||||||||||| ||||||
Sbjct: 14506 actacaacacttcacacaatttaca 14482



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>emb|BX005272.6| Zebrafish DNA sequence from clone DKEY-23D7, complete sequence
          Length = 215838

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 354    gatccatgctttgatgttgtc 374
              |||||||||||||||||||||
Sbjct: 181898 gatccatgctttgatgttgtc 181878



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>gb|AC161193.3| Mus musculus chromosome 8, clone RP23-308L22, complete sequence
          Length = 177860

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    ccttcagagaaaccccaggt 61
             ||||||||||||||||||||
Sbjct: 38704 ccttcagagaaaccccaggt 38723



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>gb|AC112964.8| Mus musculus chromosome 8, clone RP24-82M4, complete sequence
          Length = 193076

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    ccttcagagaaaccccaggt 61
             ||||||||||||||||||||
Sbjct: 90667 ccttcagagaaaccccaggt 90686



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>gb|AC120889.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0018K14, complete sequence
          Length = 152725

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tgcatattgttgtactaaga 149
             ||||||||||||||||||||
Sbjct: 50423 tgcatattgttgtactaaga 50442



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>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064E13,
              complete sequence
          Length = 150158

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    tgcatattgttgtactaaga 149
              ||||||||||||||||||||
Sbjct: 139613 tgcatattgttgtactaaga 139632



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>ref|NM_003410.2| Homo sapiens zinc finger protein, X-linked (ZFX), mRNA
          Length = 5811

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 105  acaacacttcacacatttta 124
            ||||||||||||||||||||
Sbjct: 5240 acaacacttcacacatttta 5259



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>gb|AC122326.4| Mus musculus BAC clone RP23-337J18 from chromosome 10, complete sequence
          Length = 236165

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    gccagagagctgctgctcct 328
              ||||||||||||||||||||
Sbjct: 193917 gccagagagctgctgctcct 193936



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>emb|BX649356.19| Zebrafish DNA sequence from clone CH211-209H5 in linkage group 3,
              complete sequence
          Length = 200759

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    gatccatgctttgatgttgt 373
              ||||||||||||||||||||
Sbjct: 181908 gatccatgctttgatgttgt 181927



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>emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in linkage group 8, complete
              sequence
          Length = 153753

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    gatccatgctttgatgttgt 373
              ||||||||||||||||||||
Sbjct: 103405 gatccatgctttgatgttgt 103424



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>emb|CR385077.11| Zebrafish DNA sequence from clone CH211-262M14 in linkage group 15,
             complete sequence
          Length = 105764

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 355   atccatgctttgatgttgtcaatg 378
             ||||||||||| ||||||||||||
Sbjct: 46695 atccatgcttttatgttgtcaatg 46672



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>gb|AC073237.3| Homo sapiens BAC clone RP11-792I5 from 7, complete sequence
          Length = 54291

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tcctcgccagagagctgctg 323
             ||||||||||||||||||||
Sbjct: 10927 tcctcgccagagagctgctg 10908



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>gb|AC144511.1| Pan troglodytes BAC clone RP43-45C15 from 7, complete sequence
          Length = 153510

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tcctcgccagagagctgctg 323
             ||||||||||||||||||||
Sbjct: 10897 tcctcgccagagagctgctg 10878



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>emb|BX640465.7| Zebrafish DNA sequence from clone CH211-198B21 in linkage group 9,
             complete sequence
          Length = 214459

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   gatccatgctttgatgttgt 373
             ||||||||||||||||||||
Sbjct: 20824 gatccatgctttgatgttgt 20805



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>emb|CR391949.7| Zebrafish DNA sequence from clone CH211-149B20 in linkage group 9,
              complete sequence
          Length = 162252

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 351    gtagatccatgctttgatgttgtcaatg 378
              ||||||||||||||| ||||||| ||||
Sbjct: 156810 gtagatccatgcttttatgttgttaatg 156783



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>emb|BX530056.17| Zebrafish DNA sequence from clone CH211-208I16 in linkage group 18,
              complete sequence
          Length = 235804

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    gatccatgctttgatgttgt 373
              ||||||||||||||||||||
Sbjct: 110797 gatccatgctttgatgttgt 110816



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>emb|AL357127.17| Human DNA sequence from clone RP11-282I1 on chromosome 10 Contains the
             3' end of a novel gene and a novel gene, complete sequence
          Length = 124343

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    cagaaactacaacacttcac 116
             ||||||||||||||||||||
Sbjct: 35488 cagaaactacaacacttcac 35469



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>emb|AL157407.11| Human DNA sequence from clone RP4-609E1 on chromosome 1p31.2-32.1
             Contains the ARHI gene for ras homolog gene family member
             I, part of a novel gene (FLJ38762),  ADP-ribosylation
             factor-like 5 (ARL5) pseudogene and the 3' end of a
             putative NFkB activating protein 373, complete sequence
          Length = 142396

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    gtcacactgaaattatcatt 41
             ||||||||||||||||||||
Sbjct: 12994 gtcacactgaaattatcatt 12975



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>emb|X59739.1|HSZFX2 Human ZFX mRNA for put. transcription activator, isoform 2
          Length = 5527

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 105  acaacacttcacacatttta 124
            ||||||||||||||||||||
Sbjct: 5064 acaacacttcacacatttta 5083



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>emb|AL035592.1|SPCC1393 S.pombe chromosome III cosmid c1393
          Length = 32625

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 ccaaaagcaaaggaccaatt 217
           ||||||||||||||||||||
Sbjct: 165 ccaaaagcaaaggaccaatt 184



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>emb|AL023518.2|SPCC1020 S.pombe chromosome III cosmid c1020
          Length = 42460

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   ccaaaagcaaaggaccaatt 217
             ||||||||||||||||||||
Sbjct: 42298 ccaaaagcaaaggaccaatt 42317



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>emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in linkage group 21,
             complete sequence
          Length = 185814

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   gatccatgctttgatgttgt 373
             ||||||||||||||||||||
Sbjct: 77635 gatccatgctttgatgttgt 77616



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>emb|BX511186.13| Zebrafish DNA sequence from clone DKEY-246J23 in linkage group 18,
              complete sequence
          Length = 138351

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    gatccatgctttgatgttgt 373
              ||||||||||||||||||||
Sbjct: 122709 gatccatgctttgatgttgt 122728



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>emb|BX510906.21| Zebrafish DNA sequence from clone CH211-203M24 in linkage group 20,
             complete sequence
          Length = 70824

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   gatccatgctttgatgttgt 373
             ||||||||||||||||||||
Sbjct: 18597 gatccatgctttgatgttgt 18578



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>emb|BX546500.7| Zebrafish DNA sequence from clone DKEY-15L19 in linkage group 23,
             complete sequence
          Length = 237446

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   gatccatgctttgatgttgt 373
             ||||||||||||||||||||
Sbjct: 11520 gatccatgctttgatgttgt 11501



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>gb|BC030756.2| Homo sapiens cDNA clone IMAGE:4797449
          Length = 1235

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 acaacacttcacacatttta 124
           ||||||||||||||||||||
Sbjct: 752 acaacacttcacacatttta 771



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>emb|BX284673.9| Zebrafish DNA sequence from clone DKEY-71P21 in linkage group 13,
              complete sequence
          Length = 171564

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 355    atccatgctttgatgttgtcaatg 378
              ||||||||||||||||||| ||||
Sbjct: 100516 atccatgctttgatgttgttaatg 100539



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>emb|BX682550.7| Zebrafish DNA sequence from clone DKEY-93N13 in linkage group 3, complete
              sequence
          Length = 149762

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    gatccatgctttgatgttgt 373
              ||||||||||||||||||||
Sbjct: 102079 gatccatgctttgatgttgt 102098



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>ref|NM_136727.2| Drosophila melanogaster CAP CG18408-RA, transcript variant A (CAP),
            mRNA
          Length = 7846

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   aaccccaggtacataagtac 71
            ||||||||||||||||||||
Sbjct: 4633 aaccccaggtacataagtac 4652



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>gb|AC079880.6| Homo sapiens BAC clone RP11-453E17 from 4, complete sequence
          Length = 166862

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   acaacacttcacacatttta 124
             ||||||||||||||||||||
Sbjct: 53806 acaacacttcacacatttta 53825



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>gb|AF448043.1|AF448043 Pseudomonas sp. SOD-3 16S ribosomal RNA gene, partial sequence
          Length = 1401

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 216 ttcacatccatctcaccaaccacc 239
           ||||||||||||| ||||||||||
Sbjct: 542 ttcacatccatcttaccaaccacc 519



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>gb|AC026696.5| Homo sapiens chromosome 5 clone CTC-348L14, complete sequence
          Length = 125862

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   tgttcaatgactttcttccc 419
             ||||||||||||||||||||
Sbjct: 22738 tgttcaatgactttcttccc 22757



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>emb|BX682548.7| Zebrafish DNA sequence from clone DKEY-94A14 in linkage group 2,
            complete sequence
          Length = 111741

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  gatccatgctttgatgttgt 373
            ||||||||||||||||||||
Sbjct: 2852 gatccatgctttgatgttgt 2833



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>gb|AC016568.5| Homo sapiens chromosome 5 clone CTC-566C5, complete sequence
          Length = 220932

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 400  tgttcaatgactttcttccc 419
            ||||||||||||||||||||
Sbjct: 5719 tgttcaatgactttcttccc 5700



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>gb|AC007417.5| Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
             BACR48F07, complete sequence
          Length = 175681

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    aaccccaggtacataagtac 71
             ||||||||||||||||||||
Sbjct: 84623 aaccccaggtacataagtac 84642



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>ref|NM_001022950.1| Schizosaccharomyces pombe 972h- P-type proton ATPase (SPCC1020.01z),
            partial mRNA
          Length = 3033

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  ccaaaagcaaaggaccaatt 217
            ||||||||||||||||||||
Sbjct: 1558 ccaaaagcaaaggaccaatt 1577



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>emb|BX276087.14| Zebrafish DNA sequence from clone CH211-270M20 in linkage group 10,
              complete sequence
          Length = 167208

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    gatccatgctttgatgttgt 373
              ||||||||||||||||||||
Sbjct: 104575 gatccatgctttgatgttgt 104594



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>emb|BX890610.8| Zebrafish DNA sequence from clone DKEY-122C9, complete sequence
          Length = 189827

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    acaccctgcatattgttgta 143
              ||||||||||||||||||||
Sbjct: 105059 acaccctgcatattgttgta 105078



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 130      tgcatattgttgtactaaga 149
                ||||||||||||||||||||
Sbjct: 20130404 tgcatattgttgtactaaga 20130423



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>gb|AC175706.2| Mus musculus BAC clone RP24-307B22 from chromosome y, complete sequence
          Length = 186810

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    aaggaccaattcacatccat 226
              ||||||||||||||||||||
Sbjct: 139100 aaggaccaattcacatccat 139081



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>emb|BX571790.8| Zebrafish DNA sequence from clone CH211-199M3 in linkage group 20,
             complete sequence
          Length = 200944

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   gatccatgctttgatgttgt 373
             ||||||||||||||||||||
Sbjct: 27574 gatccatgctttgatgttgt 27555



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>emb|BX601646.5| Zebrafish DNA sequence from clone CH211-204J16 in linkage group 19,
              complete sequence
          Length = 163533

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    gatccatgctttgatgttgt 373
              ||||||||||||||||||||
Sbjct: 115440 gatccatgctttgatgttgt 115421



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>emb|BX470188.11| Zebrafish DNA sequence from clone DKEY-206F10 in linkage group 20,
              complete sequence
          Length = 167082

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    gatccatgctttgatgttgt 373
              ||||||||||||||||||||
Sbjct: 120979 gatccatgctttgatgttgt 120998



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>emb|AL732386.13| Zebrafish DNA sequence from clone XX-35D8 in linkage group 9,
            complete sequence
          Length = 50895

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  gatccatgctttgatgttgt 373
            ||||||||||||||||||||
Sbjct: 8189 gatccatgctttgatgttgt 8208



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>emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, complete sequence
          Length = 182526

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   gatccatgctttgatgttgt 373
             ||||||||||||||||||||
Sbjct: 79237 gatccatgctttgatgttgt 79256



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>gb|AE003830.3| Drosophila melanogaster chromosome 2R, section 20 of 73 of the complete
              sequence
          Length = 240481

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     aaccccaggtacataagtac 71
              ||||||||||||||||||||
Sbjct: 160779 aaccccaggtacataagtac 160798



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>emb|CR407543.6| Zebrafish DNA sequence from clone CH211-63M22 in linkage group 10,
             complete sequence
          Length = 105526

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   gatccatgctttgatgttgt 373
             ||||||||||||||||||||
Sbjct: 86592 gatccatgctttgatgttgt 86573



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>gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome 10, complete sequence
          Length = 247228

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    gccagagagctgctgctcct 328
              ||||||||||||||||||||
Sbjct: 183214 gccagagagctgctgctcct 183195



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>dbj|AB053478.1| Drosophila melanogaster dcp mRNA for DCAPL1, complete cds
          Length = 7746

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   aaccccaggtacataagtac 71
            ||||||||||||||||||||
Sbjct: 5227 aaccccaggtacataagtac 5246



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 130      tgcatattgttgtactaaga 149
                ||||||||||||||||||||
Sbjct: 20415503 tgcatattgttgtactaaga 20415522



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>gb|AC002404.1|AC002404 Human Chromosome X PAC RPCI1-290C9 from the Pieter de Jong Human PAC
             library; complete sequence
          Length = 110816

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   acaacacttcacacatttta 124
             ||||||||||||||||||||
Sbjct: 28487 acaacacttcacacatttta 28468



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>emb|AL954771.5| Zebrafish DNA sequence from clone CH211-220B15 in linkage group 21,
             complete sequence
          Length = 197721

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   gatccatgctttgatgttgt 373
             ||||||||||||||||||||
Sbjct: 29271 gatccatgctttgatgttgt 29290



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>dbj|AB209892.1| Homo sapiens mRNA for X-linked zinc finger protein variant protein
          Length = 7337

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 105  acaacacttcacacatttta 124
            ||||||||||||||||||||
Sbjct: 5252 acaacacttcacacatttta 5271



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>gb|M60471.1|YSPPMA2A S.pombe H+-ATPase (pma2) gene, complete cds
          Length = 3500

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  ccaaaagcaaaggaccaatt 217
            ||||||||||||||||||||
Sbjct: 1734 ccaaaagcaaaggaccaatt 1753


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,775,222
Number of Sequences: 3902068
Number of extensions: 3775222
Number of successful extensions: 88608
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88482
Number of HSP's gapped (non-prelim): 126
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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