ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast77a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467289.1| Oryza sativa (japonica cultivar-group), mRNA 216 5e-53
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
3dbj|AP005868.3| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
4dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
5dbj|AK066018.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 5e-53
6emb|AJ495787.1|OSA495787 Oryza sativa (japonica cultivar-group) ... 208 1e-50
7gb|AY104127.1| Zea mays PCO110287 mRNA sequence 131 2e-27
8gb|AC110038.25| Mus musculus chromosome 1, clone RP23-258M15, co... 44 0.40
9gb|AC018812.5|AC018812 Homo sapiens chromosome 3 clone RP11-161D... 44 0.40
10gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3... 44 0.40
11emb|AL136959.9| Human DNA sequence from clone RP11-160G19 on chr... 42 1.6
12ref|NM_180503.1| Arabidopsis thaliana protein transporter AT5G16... 40 6.2
13ref|NM_121694.2| Arabidopsis thaliana protein transporter AT5G16... 40 6.2
14ref|NM_180502.1| Arabidopsis thaliana protein transporter AT5G16... 40 6.2
15gb|AC165246.2| Mus musculus BAC clone RP24-220A15 from chromosom... 40 6.2
16ref|NM_197898.1| Oryza sativa (japonica cultivar-group) hepatocy... 40 6.2
17gb|AC110241.17| Mus musculus chromosome 16, clone RP23-129F22, c... 40 6.2
18gb|AY327125.1| Salvelinus malma malma clone Smm-5 microsatellite... 40 6.2
19gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 geno... 40 6.2
20gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome... 40 6.2
21emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigrovi... 40 6.2
22emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome 5, BA... 40 6.2
23emb|AJ495791.1|OSA495791 Oryza sativa (japonica cultivar-group) ... 40 6.2
24emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence 40 6.2
25gb|AC093800.2| Homo sapiens BAC clone RP11-312J17 from 4, comple... 40 6.2
26gb|AY062640.1| Arabidopsis thaliana TOM (target of myb1)-like pr... 40 6.2
27gb|AY056786.1| Arabidopsis thaliana AT5g16880/F2K13_30 mRNA, com... 40 6.2
28gb|AC034243.7| Homo sapiens chromosome 5 clone RP1-204O11, compl... 40 6.2
29gb|AC018710.4|AC018710 Homo sapiens BAC clone RP11-296L20 from 4... 40 6.2
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
32gb|AC016755.6| Homo sapiens BAC clone RP11-519C10 from 2, comple... 40 6.2
33gb|AC007495.9| Homo sapiens chromosome 16 clone RP11-355E10, com... 40 6.2
34gb|AY085140.1| Arabidopsis thaliana clone 1330 mRNA, complete se... 40 6.2
35gb|AC092275.3| Homo sapiens chromosome 16 clone CTC-786C10, comp... 40 6.2
36gb|BT002553.1| Arabidopsis thaliana TOM (target of myb1)-like pr... 40 6.2
37dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
38dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
39dbj|AK067871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
40gb|AC113180.5| Mus musculus chromosome 16, clone RP23-366B13, co... 40 6.2
41gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
42gb|AY884207.1| Homo sapiens catenin (cadherin-associated protein... 40 6.2 
>ref|XM_467289.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1624

 Score =  216 bits (109), Expect = 5e-53
 Identities = 163/181 (90%)
 Strand = Plus / Minus

                                                                        
Query: 280  acggtatttagaagttgattaggacatctttctttgggtcctgccttttggacacgtcct 339
            |||||||||| ||| |||||||| |||||||||| || |||||| |||||| | | || |
Sbjct: 1442 acggtatttaaaagctgattaggtcatctttcttcggatcctgctttttgggcccttctt 1383

                                                                        
Query: 340  gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcgaggatatcat 399
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1382 gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcaaggatatcat 1323

                                                                        
Query: 400  catcgccgcctgacattgctcgagcagcagctggttttctgaccagggcatcctcgttgc 459
            |||| || |||||| ||||||||| | ||||||||||||||||||||||||| || ||||
Sbjct: 1322 catctccacctgaccttgctcgagaaccagctggttttctgaccagggcatcttcattgc 1263

             
Query: 460  c 460
            |
Sbjct: 1262 c 1262



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 134  atcgtatgcaaataaacaagcgacccaa 161
            ||||||||||||||||||||||| ||||
Sbjct: 1569 atcgtatgcaaataaacaagcgatccaa 1542
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  216 bits (109), Expect = 5e-53
 Identities = 163/181 (90%)
 Strand = Plus / Minus

                                                                            
Query: 280      acggtatttagaagttgattaggacatctttctttgggtcctgccttttggacacgtcct 339
                |||||||||| ||| |||||||| |||||||||| || |||||| |||||| | | || |
Sbjct: 28695068 acggtatttaaaagctgattaggtcatctttcttcggatcctgctttttgggcccttctt 28695009

                                                                            
Query: 340      gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcgaggatatcat 399
                ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 28695008 gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcaaggatatcat 28694949

                                                                            
Query: 400      catcgccgcctgacattgctcgagcagcagctggttttctgaccagggcatcctcgttgc 459
                |||| || |||||| ||||||||| | ||||||||||||||||||||||||| || ||||
Sbjct: 28694948 catctccacctgaccttgctcgagaaccagctggttttctgaccagggcatcttcattgc 28694889

                 
Query: 460      c 460
                |
Sbjct: 28694888 c 28694888



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 134      atcgtatgcaaataaacaagcgacccaa 161
                ||||||||||||||||||||||| ||||
Sbjct: 28695195 atcgtatgcaaataaacaagcgatccaa 28695168
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>dbj|AP005868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0666E12
          Length = 47765

 Score =  216 bits (109), Expect = 5e-53
 Identities = 163/181 (90%)
 Strand = Plus / Minus

                                                                         
Query: 280   acggtatttagaagttgattaggacatctttctttgggtcctgccttttggacacgtcct 339
             |||||||||| ||| |||||||| |||||||||| || |||||| |||||| | | || |
Sbjct: 43081 acggtatttaaaagctgattaggtcatctttcttcggatcctgctttttgggcccttctt 43022

                                                                         
Query: 340   gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcgaggatatcat 399
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 43021 gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcaaggatatcat 42962

                                                                         
Query: 400   catcgccgcctgacattgctcgagcagcagctggttttctgaccagggcatcctcgttgc 459
             |||| || |||||| ||||||||| | ||||||||||||||||||||||||| || ||||
Sbjct: 42961 catctccacctgaccttgctcgagaaccagctggttttctgaccagggcatcttcattgc 42902

              
Query: 460   c 460
             |
Sbjct: 42901 c 42901



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 134   atcgtatgcaaataaacaagcgacccaa 161
             ||||||||||||||||||||||| ||||
Sbjct: 43208 atcgtatgcaaataaacaagcgatccaa 43181
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>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0459B01
          Length = 163087

 Score =  216 bits (109), Expect = 5e-53
 Identities = 163/181 (90%)
 Strand = Plus / Minus

                                                                         
Query: 280   acggtatttagaagttgattaggacatctttctttgggtcctgccttttggacacgtcct 339
             |||||||||| ||| |||||||| |||||||||| || |||||| |||||| | | || |
Sbjct: 11641 acggtatttaaaagctgattaggtcatctttcttcggatcctgctttttgggcccttctt 11582

                                                                         
Query: 340   gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcgaggatatcat 399
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11581 gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcaaggatatcat 11522

                                                                         
Query: 400   catcgccgcctgacattgctcgagcagcagctggttttctgaccagggcatcctcgttgc 459
             |||| || |||||| ||||||||| | ||||||||||||||||||||||||| || ||||
Sbjct: 11521 catctccacctgaccttgctcgagaaccagctggttttctgaccagggcatcttcattgc 11462

              
Query: 460   c 460
             |
Sbjct: 11461 c 11461



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 134   atcgtatgcaaataaacaagcgacccaa 161
             ||||||||||||||||||||||| ||||
Sbjct: 11768 atcgtatgcaaataaacaagcgatccaa 11741
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>dbj|AK066018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D24, full
            insert sequence
          Length = 1624

 Score =  216 bits (109), Expect = 5e-53
 Identities = 163/181 (90%)
 Strand = Plus / Minus

                                                                        
Query: 280  acggtatttagaagttgattaggacatctttctttgggtcctgccttttggacacgtcct 339
            |||||||||| ||| |||||||| |||||||||| || |||||| |||||| | | || |
Sbjct: 1442 acggtatttaaaagctgattaggtcatctttcttcggatcctgctttttgggcccttctt 1383

                                                                        
Query: 340  gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcgaggatatcat 399
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1382 gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcaaggatatcat 1323

                                                                        
Query: 400  catcgccgcctgacattgctcgagcagcagctggttttctgaccagggcatcctcgttgc 459
            |||| || |||||| ||||||||| | ||||||||||||||||||||||||| || ||||
Sbjct: 1322 catctccacctgaccttgctcgagaaccagctggttttctgaccagggcatcttcattgc 1263

             
Query: 460  c 460
            |
Sbjct: 1262 c 1262



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 134  atcgtatgcaaataaacaagcgacccaa 161
            ||||||||||||||||||||||| ||||
Sbjct: 1569 atcgtatgcaaataaacaagcgatccaa 1542
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>emb|AJ495787.1|OSA495787 Oryza sativa (japonica cultivar-group) mRNA for TOM1 protein
          Length = 1740

 Score =  208 bits (105), Expect = 1e-50
 Identities = 162/181 (89%)
 Strand = Plus / Minus

                                                                        
Query: 280  acggtatttagaagttgattaggacatctttctttgggtcctgccttttggacacgtcct 339
            |||||||||| ||| |||| ||| |||||||||| || |||||| |||||| | | || |
Sbjct: 1441 acggtatttaaaagctgataaggtcatctttcttcggatcctgctttttgggcccttctt 1382

                                                                        
Query: 340  gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcgaggatatcat 399
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1381 gggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcaaggatatcat 1322

                                                                        
Query: 400  catcgccgcctgacattgctcgagcagcagctggttttctgaccagggcatcctcgttgc 459
            |||| || |||||| ||||||||| | ||||||||||||||||||||||||| || ||||
Sbjct: 1321 catctccacctgaccttgctcgagaaccagctggttttctgaccagggcatcttcattgc 1262

             
Query: 460  c 460
            |
Sbjct: 1261 c 1261



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 134  atcgtatgcaaataaacaagcgacccaa 161
            ||||||||||||||||||||||| ||||
Sbjct: 1568 atcgtatgcaaataaacaagcgatccaa 1541
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>gb|AY104127.1| Zea mays PCO110287 mRNA sequence
          Length = 1870

 Score =  131 bits (66), Expect = 2e-27
 Identities = 111/126 (88%)
 Strand = Plus / Minus

                                                                        
Query: 336  tcctgggaactgcttcctcccttcttgccaaatatcatctcatcgagatcatcgaggata 395
            |||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||||| 
Sbjct: 1464 tcctgggagctgctacctcccttcttgccaaatatcatctcgtcgagatcatcaaggatg 1405

                                                                        
Query: 396  tcatcatcgccgcctgacattgctcgagcagcagctggttttctgaccagggcatcctcg 455
            |||||||| || |||||| ||||||  || ||||||||||||||||| ||||| || || 
Sbjct: 1404 tcatcatctccacctgacgttgctctcgcggcagctggttttctgacaagggcgtcttca 1345

                  
Query: 456  ttgcca 461
            ||||||
Sbjct: 1344 ttgcca 1339
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>gb|AC110038.25| Mus musculus chromosome 1, clone RP23-258M15, complete sequence
          Length = 232830

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 68    tgaaacaggaagatgagaagtt 89
             ||||||||||||||||||||||
Sbjct: 92609 tgaaacaggaagatgagaagtt 92588
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>gb|AC018812.5|AC018812 Homo sapiens chromosome 3 clone RP11-161D20 map 3p, complete sequence
          Length = 169199

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 339    tgggaactgcttcctcccttcttgcc 364
              |||||||| |||||||||||||||||
Sbjct: 137894 tgggaactccttcctcccttcttgcc 137919
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>gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3p, complete sequence
          Length = 189097

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 339    tgggaactgcttcctcccttcttgcc 364
              |||||||| |||||||||||||||||
Sbjct: 156196 tgggaactccttcctcccttcttgcc 156171
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>emb|AL136959.9| Human DNA sequence from clone RP11-160G19 on chromosome 13q13.3-14.2
            Contains part of a novel gene, complete sequence
          Length = 22844

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 74   aggaagatgagaagtttgcag 94
            |||||||||||||||||||||
Sbjct: 9997 aggaagatgagaagtttgcag 9977
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>ref|NM_180503.1| Arabidopsis thaliana protein transporter AT5G16880 transcript variant
            AT5G16880.3 mRNA, complete cds
          Length = 1502

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 357  ttcttgccaaatatcatctcatcgagatcatc 388
            ||||| || |||||||||||||| ||||||||
Sbjct: 1225 ttcttaccgaatatcatctcatcaagatcatc 1194
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>ref|NM_121694.2| Arabidopsis thaliana protein transporter AT5G16880 transcript variant
            AT5G16880.1 mRNA, complete cds
          Length = 1579

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 357  ttcttgccaaatatcatctcatcgagatcatc 388
            ||||| || |||||||||||||| ||||||||
Sbjct: 1302 ttcttaccgaatatcatctcatcaagatcatc 1271
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>ref|NM_180502.1| Arabidopsis thaliana protein transporter AT5G16880 transcript variant
            AT5G16880.2 mRNA, complete cds
          Length = 1579

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 357  ttcttgccaaatatcatctcatcgagatcatc 388
            ||||| || |||||||||||||| ||||||||
Sbjct: 1302 ttcttaccgaatatcatctcatcaagatcatc 1271
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>gb|AC165246.2| Mus musculus BAC clone RP24-220A15 from chromosome 9, complete sequence
          Length = 161208

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   atcaactgaacaagctctgg 120
             ||||||||||||||||||||
Sbjct: 12838 atcaactgaacaagctctgg 12857
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>ref|NM_197898.1| Oryza sativa (japonica cultivar-group) hepatocyte growth
            factor-regulated tyrosine kinase substrate-like protein
            (OSJNBa0035H01.5), mRNA
          Length = 1554

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  cccttcttgccaaatatcat 373
            ||||||||||||||||||||
Sbjct: 1189 cccttcttgccaaatatcat 1170
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>gb|AC110241.17| Mus musculus chromosome 16, clone RP23-129F22, complete sequence
          Length = 256720

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     ataaccatgaaacaggaaga 80
              ||||||||||||||||||||
Sbjct: 234170 ataaccatgaaacaggaaga 234151
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>gb|AY327125.1| Salvelinus malma malma clone Smm-5 microsatellite sequence
          Length = 668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  caagagctattcattccatg 30
           ||||||||||||||||||||
Sbjct: 541 caagagctattcattccatg 560
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>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete
             sequence
          Length = 64582

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   cccttcttgccaaatatcat 373
             ||||||||||||||||||||
Sbjct: 49966 cccttcttgccaaatatcat 49947
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>gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome 3, complete sequence
          Length = 209458

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    atataaccatgaaacaggaa 78
             ||||||||||||||||||||
Sbjct: 40751 atataaccatgaaacaggaa 40732
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>emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigroviridis
          Length = 265677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     aaacaggaagatgagaagtt 89
              ||||||||||||||||||||
Sbjct: 191484 aaacaggaagatgagaagtt 191503
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>emb|AL391141.1|ATF2K13 Arabidopsis thaliana DNA chromosome 5, BAC clone F2K13 (ESSA project)
          Length = 98101

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 357  ttcttgccaaatatcatctcatcgagatcatc 388
            ||||| || |||||||||||||| ||||||||
Sbjct: 8280 ttcttaccgaatatcatctcatcaagatcatc 8249
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>emb|AJ495791.1|OSA495791 Oryza sativa (japonica cultivar-group) mRNA for TOM2 protein
          Length = 1606

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  cccttcttgccaaatatcat 373
            ||||||||||||||||||||
Sbjct: 1205 cccttcttgccaaatatcat 1186
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>emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence
          Length = 265677

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     aaacaggaagatgagaagtt 89
              ||||||||||||||||||||
Sbjct: 191484 aaacaggaagatgagaagtt 191503
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>gb|AC093800.2| Homo sapiens BAC clone RP11-312J17 from 4, complete sequence
          Length = 161370

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    aggacatctttctttgggtc 319
              ||||||||||||||||||||
Sbjct: 107909 aggacatctttctttgggtc 107928
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>gb|AY062640.1| Arabidopsis thaliana TOM (target of myb1)-like protein (F2K13_30)
            mRNA, complete cds
          Length = 1545

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 357  ttcttgccaaatatcatctcatcgagatcatc 388
            ||||| || |||||||||||||| ||||||||
Sbjct: 1268 ttcttaccgaatatcatctcatcaagatcatc 1237
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>gb|AY056786.1| Arabidopsis thaliana AT5g16880/F2K13_30 mRNA, complete cds
          Length = 1542

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 357  ttcttgccaaatatcatctcatcgagatcatc 388
            ||||| || |||||||||||||| ||||||||
Sbjct: 1303 ttcttaccgaatatcatctcatcaagatcatc 1272
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>gb|AC034243.7| Homo sapiens chromosome 5 clone RP1-204O11, complete sequence
          Length = 191308

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    atcaactgaacaagctctggagga 124
              ||||||||||||| ||||||||||
Sbjct: 143510 atcaactgaacaacctctggagga 143487
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>gb|AC018710.4|AC018710 Homo sapiens BAC clone RP11-296L20 from 4, complete sequence
          Length = 197236

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    cccatataaccatgaaacaggaag 79
             |||||||||||||||| |||||||
Sbjct: 59182 cccatataaccatgaaccaggaag 59159
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 354      cccttcttgccaaatatcat 373
                ||||||||||||||||||||
Sbjct: 22534248 cccttcttgccaaatatcat 22534229
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 158      ccaatccctaactgaatgtacgtgcagtgcag 189
                |||||| ||| |||||| ||||||||||||||
Sbjct: 21844406 ccaatcactagctgaatctacgtgcagtgcag 21844437
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>gb|AC016755.6| Homo sapiens BAC clone RP11-519C10 from 2, complete sequence
          Length = 46762

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    aagtttgcagcaacttatca 104
             ||||||||||||||||||||
Sbjct: 40870 aagtttgcagcaacttatca 40889
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>gb|AC007495.9| Homo sapiens chromosome 16 clone RP11-355E10, complete sequence
          Length = 198575

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     aacaggaagatgagaagttt 90
              ||||||||||||||||||||
Sbjct: 153298 aacaggaagatgagaagttt 153317
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>gb|AY085140.1| Arabidopsis thaliana clone 1330 mRNA, complete sequence
          Length = 1540

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 357  ttcttgccaaatatcatctcatcgagatcatc 388
            ||||| || |||||||||||||| ||||||||
Sbjct: 1301 ttcttaccgaatatcatctcatcaagatcatc 1270
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>gb|AC092275.3| Homo sapiens chromosome 16 clone CTC-786C10, complete sequence
          Length = 191996

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   tgggaactgcttcctccctt 358
             ||||||||||||||||||||
Sbjct: 85111 tgggaactgcttcctccctt 85092
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>gb|BT002553.1| Arabidopsis thaliana TOM (target of myb1)-like protein (At5g16880)
            mRNA, complete cds
          Length = 1388

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 357  ttcttgccaaatatcatctcatcgagatcatc 388
            ||||| || |||||||||||||| ||||||||
Sbjct: 1136 ttcttaccgaatatcatctcatcaagatcatc 1105
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>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0610D01
          Length = 146418

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 158    ccaatccctaactgaatgtacgtgcagtgcag 189
              |||||| ||| |||||| ||||||||||||||
Sbjct: 102487 ccaatcactagctgaatctacgtgcagtgcag 102518
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>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0006A22
          Length = 190690

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 158   ccaatccctaactgaatgtacgtgcagtgcag 189
             |||||| ||| |||||| ||||||||||||||
Sbjct: 66891 ccaatcactagctgaatctacgtgcagtgcag 66922
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>dbj|AK067871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126G20, full
           insert sequence
          Length = 1169

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 cccttcttgccaaatatcat 373
           ||||||||||||||||||||
Sbjct: 792 cccttcttgccaaatatcat 773
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>gb|AC113180.5| Mus musculus chromosome 16, clone RP23-366B13, complete sequence
          Length = 215198

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     ataaccatgaaacaggaaga 80
              ||||||||||||||||||||
Sbjct: 136207 ataaccatgaaacaggaaga 136188
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 354      cccttcttgccaaatatcat 373
                ||||||||||||||||||||
Sbjct: 22546716 cccttcttgccaaatatcat 22546697
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>gb|AY884207.1| Homo sapiens catenin (cadherin-associated protein), alpha 1, 102kDa
             (CTNNA1) gene, complete cds
          Length = 155983

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 101   atcaactgaacaagctctggagga 124
             ||||||||||||| ||||||||||
Sbjct: 70538 atcaactgaacaacctctggagga 70515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,079,542
Number of Sequences: 3902068
Number of extensions: 4079542
Number of successful extensions: 77639
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77472
Number of HSP's gapped (non-prelim): 167
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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