>YEA6_YEAST (P39953) Putative mitochondrial carrier YEL006W|
          Length = 335

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 19/61 (31%), Positives = 27/61 (44%)
 Frame = +2

Query: 44  MLLVRMHSCISKSS*TYLHTTIHILRSYNSELPRVVYEHQNPAIRIAATQSAKE*GYNMG 223
           ++L  M S +  S+ TY H  +       S+LP  V  H  P I+I   Q     G+  G
Sbjct: 246 LILASMLSKMVASTVTYPHEILRTRMQLKSDLPNTVQRHLLPLIKITYRQEGFA-GFYSG 304

Query: 224 F 226
           F
Sbjct: 305 F 305

>MAD27_ORYSA (Q6EP49) MADS-box transcription factor 27 (OsMADS27) (RMADS218)|
          Length = 240

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = +2

Query: 23  IRKKKTVMLLVRMHSCISKSS*TY-----LHTTIHILRSYNSELPRVVYEHQNPA 172
           +R KK  +L+  +H    K S  +     L+  I ++R  N+EL + +YE + P+
Sbjct: 137 VRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENAELYKKIYETEGPS 191

>PININ_CANFA (P79149) Pinin|
          Length = 773

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -1

Query: 333 QHSSKRPSGTRWMQCLRSPSPWSMLSKPEVAVQMQPKPML*P 208
           + S  +P   R +Q L  P P   L +PE   Q+QP+P L P
Sbjct: 466 RESEPQPEPVRHLQPLPQPEPEPEL-QPEPQPQLQPEPQLQP 506

>KR10A_HUMAN (P60014) Keratin-associated protein 10-10 (Keratin-associated|
           protein 10.10) (High sulfur keratin-associated protein
           10.10) (Keratin-associated protein 18-10)
           (Keratin-associated protein 18.10)
          Length = 251

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/64 (25%), Positives = 26/64 (40%)
 Frame = -2

Query: 266 ACCRSLK*PCRCSQSPCYNLILLPTVLRQF*LRGFDAHTPHVVAHCCMSAEYVSLCANMF 87
           +CC     PC C+ +P   L+  P                 V + CC +A   S C + +
Sbjct: 25  SCCE----PCCCAPAPSLTLVCTPVSC--------------VSSPCCQTACEPSACQSGY 66

Query: 86  TTTC 75
           T++C
Sbjct: 67  TSSC 70

>KSGA_METJA (Q58435) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase)
          Length = 275

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 143 RVVYEHQNPAIRIAATQSAKE*GYN 217
           R +++H+N ++R A   S+KE  YN
Sbjct: 200 RAIFQHRNKSVRKALIDSSKELNYN 224

>YPC2_ECOLI (P18128) Hypothetical 26.4 kDa protein (ORF 245)|
          Length = 245

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -2

Query: 317 DPPVQGGCSAFGHRAHGA---CCRSLK*PCRCSQSPCYNLILLP 195
           +PP   G  A    AH A   CC  ++ PCR +  PC N   LP
Sbjct: 15  NPPTLPGAGAVWKSAHLAGRRCCVEIRPPCR-APVPCGNPPTLP 57

>PMA1_AJECA (Q07421) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)|
          Length = 916

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 9/32 (28%)
 Frame = +2

Query: 224 FGCICT---------ATSGFDNMLHGLGDRRH 292
           FGC C           ++GFDNM+HG   +++
Sbjct: 861 FGCFCVLGGLYYLLQGSAGFDNMMHGKSPKKN 892

>ZEP1_HUMAN (P15822) Zinc finger protein 40 (Human immunodeficiency virus type I|
            enhancer-binding protein 1) (HIV-EP1) (Major
            histocompatibility complex-binding protein 1) (MBP-1)
            (Positive regulatory domain II-binding factor 1)
            (PRDII-BF1)
          Length = 2717

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 99   TQRYIFCAHTTVSYHVWCMSIKTPQLELPQHSRQKNKVITW 221
            TQ+  F +  T +   WC  ++   L LPQ  ++ +    W
Sbjct: 1927 TQQLAFPSLKTTTNFTWCYLLRQKSLHLPQKDQKTSAYTDW 1967

>CU025_HUMAN (Q9Y426) Protein C21orf25 precursor|
          Length = 696

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 270 WSMLSKPEVAVQMQPKPM 217
           WS +S PE+AV +QPK +
Sbjct: 180 WSFISVPEMAVNIQPKAL 197


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,777,112
Number of Sequences: 219361
Number of extensions: 1122859
Number of successful extensions: 2820
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2820
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)