ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast76e10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cgccggcggccacgccaccatc 247 |||||||||||||||||||||| Sbjct: 172158 cgccggcggccacgccaccatc 172137
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cgccggcggccacgccaccatc 247 |||||||||||||||||||||| Sbjct: 84979 cgccggcggccacgccaccatc 84958
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 79 aatcaaatccaaaagtacaaacccaa 104 |||||||| ||||||||||||||||| Sbjct: 2576722 aatcaaatacaaaagtacaaacccaa 2576697 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 12989971 tcaaatacaaaagtacaaacccaa 12989948
>gb|AC132445.3| Mus musculus BAC clone RP23-173F23 from chromosome unknown, complete sequence Length = 194715 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 60 attatcttcaccacatttcaatcaaa 85 |||||||||||||||||||| ||||| Sbjct: 49775 attatcttcaccacatttcattcaaa 49800
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Minus Query: 79 aatcaaatccaaaagtacaaacccaa 104 |||||||| ||||||||||||||||| Sbjct: 2576666 aatcaaatacaaaagtacaaacccaa 2576641 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 12944245 tcaaatacaaaagtacaaacccaa 12944222
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 79 aatcaaatccaaaagtacaaacccaa 104 |||||||| ||||||||||||||||| Sbjct: 91287 aatcaaatacaaaagtacaaacccaa 91312
>emb|BX005233.10| Mouse DNA sequence from clone RP23-214I11 on chromosome X, complete sequence Length = 189118 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 60 attatcttcaccacatttcaatcaaa 85 |||||||||||||||||||| ||||| Sbjct: 169505 attatcttcaccacatttcattcaaa 169530
>gb|AC110622.6| Mus musculus BAC clone RP23-204H3 from chromosome 8, complete sequence Length = 190632 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 aaactatgctttcaccagagg 207 ||||||||||||||||||||| Sbjct: 175344 aaactatgctttcaccagagg 175364
>gb|AC125118.5| Mus musculus BAC clone RP24-264B17 from chromosome 1, complete sequence Length = 177149 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 caaatatcattatcttcacca 72 ||||||||||||||||||||| Sbjct: 171598 caaatatcattatcttcacca 171618
>gb|AC122427.6| Mus musculus BAC clone RP24-175C2 from chromosome 1, complete sequence Length = 180773 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 caaatatcattatcttcacca 72 ||||||||||||||||||||| Sbjct: 26173 caaatatcattatcttcacca 26193
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 gcgccggcggccacgccacca 245 ||||||||||||||||||||| Sbjct: 2149155 gcgccggcggccacgccacca 2149135
>gb|AC147185.2| Mus musculus BAC clone RP24-119J12 from 8, complete sequence Length = 164789 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 aaactatgctttcaccagagg 207 ||||||||||||||||||||| Sbjct: 121067 aaactatgctttcaccagagg 121047
>ref|XM_640282.1| Dictyostelium discoideum hypothetical protein (DDB0216955), partial mRNA Length = 8169 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aatatcattatcttcaccac 73 |||||||||||||||||||| Sbjct: 1170 aatatcattatcttcaccac 1151
>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0122P24, complete sequence Length = 136104 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 71938 tcaaatacaaaagtacaaacccaa 71961
>gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0023E20, complete sequence Length = 130827 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 106283 tcaaatgcaaaagtacaaacccaa 106306
>gb|AC158542.2| Pan troglodytes BAC clone CH251-262O17 from chromosome y, complete sequence Length = 174274 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 acaaatatcattatcttcac 70 |||||||||||||||||||| Sbjct: 61578 acaaatatcattatcttcac 61597
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 5664 tcaaatgcaaaagtacaaacccaa 5641 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 5222 tcaaatgcaaaagtacaaacccaa 5199
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 23169183 tcaaatgcaaaagtacaaacccaa 23169160 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 23168741 tcaaatgcaaaagtacaaacccaa 23168718
>gb|AC125279.1| Mus musculus BAC clone RP23-433F5 from 8, complete sequence Length = 201197 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 acatttcaatcaaatccaaaagta 95 |||||||||||| ||||||||||| Sbjct: 165788 acatttcaatcagatccaaaagta 165765
>emb|AL772392.4| Human DNA sequence from clone RP11-450P7 on chromosome X Contains the 3' end of the CNK2 gene for connector enhancer of KSR2 (KIAA0902), gene FLJ34960, 3' end of the SMPX gene for X-linked small muscle protein and a CpG island, complete sequence Length = 124186 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 atgctttcaccagaggattcacca 215 ||||||||||||||||||| |||| Sbjct: 95717 atgctttcaccagaggatttacca 95694
>emb|X53330.1|PDHISTCL P.dumerilii histone gene cluster for core histones H2A, H2B, H3 and H4 Length = 6052 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cacatttcaatcaaatccaa 90 |||||||||||||||||||| Sbjct: 1964 cacatttcaatcaaatccaa 1945
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cgccggcggccacgccacca 245 |||||||||||||||||||| Sbjct: 166599 cgccggcggccacgccacca 166618
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23, complete sequence Length = 148736 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 50680 tcaaatacaaaagtacaaacccaa 50703
>emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j24, COMPLETE SEQUENCE Length = 126498 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 acatttcaatcaaatccaaa 91 |||||||||||||||||||| Sbjct: 86364 acatttcaatcaaatccaaa 86383
>dbj|BS000571.1| Pan troglodytes chromosome Y clone:PTFY-001N01, complete sequences Length = 36962 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 acaaatatcattatcttcac 70 |||||||||||||||||||| Sbjct: 27254 acaaatatcattatcttcac 27235
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 acaaatatcattatcttcac 70 |||||||||||||||||||| Sbjct: 10084096 acaaatatcattatcttcac 10084115
>gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomic scaffold Length = 331329 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 acaaatatcattatcttcac 70 |||||||||||||||||||| Sbjct: 61183 acaaatatcattatcttcac 61202
>gb|AC164571.3| Pan troglodytes BAC clone CH251-967O8 from chromosome y, complete sequence Length = 225200 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 acaaatatcattatcttcac 70 |||||||||||||||||||| Sbjct: 77728 acaaatatcattatcttcac 77747
>gb|AC005693.3| Arabidopsis thaliana chromosome 2 clone T25N22 map mi310, complete sequence Length = 80891 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gattcaccagatccttgagc 226 |||||||||||||||||||| Sbjct: 48578 gattcaccagatccttgagc 48597
>gb|AC183493.1| Brassica oleracea Contig B, complete sequence Length = 284024 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 cacaaatatcattatcttca 69 |||||||||||||||||||| Sbjct: 248474 cacaaatatcattatcttca 248493
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 16054 tcaaatgcaaaagtacaaacccaa 16077
>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042K08, from chromosome 2, complete sequence Length = 164628 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 40618 tcaaatacaaaagtacaaacccaa 40641
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 20803955 tcaaatacaaaagtacaaacccaa 20803978
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 7398860 tcaaatacaaaagtacaaacccaa 7398837 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 7256886 tcaaatgcaaaagtacaaacccaa 7256863
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 3583213 tcaaatgcaaaagtacaaacccaa 3583236
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 11878152 tcaaatgcaaaagtacaaacccaa 11878129
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 2657259 tcaaatgcaaaagtacaaacccaa 2657236
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 20980947 tcaaatgcaaaagtacaaacccaa 20980970
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 23162211 tcaaatgcaaaagtacaaacccaa 23162188 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 23161769 tcaaatgcaaaagtacaaacccaa 23161746
>ref|XM_394543.2| PREDICTED: Apis mellifera similar to ENSANGP00000008115 (LOC411069), mRNA Length = 1250 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tcattatcttcaccacattt 77 |||||||||||||||||||| Sbjct: 329 tcattatcttcaccacattt 310
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 13278247 tcaaatgcaaaagtacaaacccaa 13278224
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 21725039 tcaaatgcaaaagtacaaacccaa 21725016
>emb|BX004882.10| Zebrafish DNA sequence from clone CH211-185C9, complete sequence Length = 137477 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 catttcaatcaaatccaaaa 92 |||||||||||||||||||| Sbjct: 127263 catttcaatcaaatccaaaa 127244
>gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098-4354721 strain AX4, complete sequence Length = 125623 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 aatatcattatcttcaccac 73 |||||||||||||||||||| Sbjct: 81261 aatatcattatcttcaccac 81242
>gb|AC163766.3| Pan troglodytes BAC clone CH251-115P4 from chromosome y, complete sequence Length = 185225 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 acaaatatcattatcttcac 70 |||||||||||||||||||| Sbjct: 146556 acaaatatcattatcttcac 146537
>gb|AC148940.5| Pan troglodytes BAC clone CH251-96J19 from chromosome y, complete sequence Length = 182743 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 acaaatatcattatcttcac 70 |||||||||||||||||||| Sbjct: 170467 acaaatatcattatcttcac 170486
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 82977 tcaaatgcaaaagtacaaacccaa 82954
>dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090E14 Length = 161119 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 107871 tcaaatgcaaaagtacaaacccaa 107894
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 77090 tcaaatgcaaaagtacaaacccaa 77067
>emb|AL928854.6| Zebrafish DNA sequence from clone CH211-59D2, complete sequence Length = 101762 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 catttcaatcaaatccaaaa 92 |||||||||||||||||||| Sbjct: 77164 catttcaatcaaatccaaaa 77183
>dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0622F08 Length = 140628 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 86174 tcaaatgcaaaagtacaaacccaa 86151
>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1521_G01 Length = 144102 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 3498 tcaaatgcaaaagtacaaacccaa 3475
>dbj|AP003918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_A03 Length = 168689 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 156437 tcaaatgcaaaagtacaaacccaa 156414
>dbj|AP005487.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1212_C09 Length = 120818 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 27297 tcaaatgcaaaagtacaaacccaa 27274
>gb|AC117231.4| Mus musculus BAC clone RP23-394M5 from 8, complete sequence Length = 195936 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 acatttcaatcaaatccaaaagta 95 |||||||||||| ||||||||||| Sbjct: 15334 acatttcaatcagatccaaaagta 15311
>emb|BX465184.7| Zebrafish DNA sequence from clone DKEY-20N10 in linkage group 20, complete sequence Length = 139351 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aactgcaaccacaaatatca 60 |||||||||||||||||||| Sbjct: 85090 aactgcaaccacaaatatca 85109
>emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on chromosome 13, complete sequence Length = 226457 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tatggaaactctaactgcaa 48 |||||||||||||||||||| Sbjct: 222704 tatggaaactctaactgcaa 222685
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 3583134 tcaaatgcaaaagtacaaacccaa 3583157
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 7468946 tcaaatacaaaagtacaaacccaa 7468923 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 7326972 tcaaatgcaaaagtacaaacccaa 7326949
>emb|AL731883.4|CNS08C8N Oryza sativa chromosome 12, . BAC OSJNBa0024B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148110 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 tcaaatccaaaagtacaaacccaa 104 |||||| ||||||||||||||||| Sbjct: 77999 tcaaatacaaaagtacaaacccaa 78022
>gb|AC142258.4| Mus musculus BAC clone RP24-511I20 from 13, complete sequence Length = 159880 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tatggaaactctaactgcaa 48 |||||||||||||||||||| Sbjct: 60292 tatggaaactctaactgcaa 60273 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,422,504 Number of Sequences: 3902068 Number of extensions: 2422504 Number of successful extensions: 44212 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43714 Number of HSP's gapped (non-prelim): 498 length of query: 300 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 278 effective length of database: 17,147,199,772 effective search space: 4766921536616 effective search space used: 4766921536616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
