>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor|
          Length = 1700

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 17/61 (27%), Positives = 22/61 (36%)
 Frame = -3

Query: 260 CQIHGQPSQPRQGCTHATSPQDSRFIIIIMLGI*MECSSPPPLAYSPCFRNKKTCYHSCS 81
           CQ    P +P+ GCT A    D             +C     +    C  NKK C  +C 
Sbjct: 705 CQCDCVPGKPKGGCTGAQKWCDKT----------CKCKCEKEMPTGGCENNKKWCDETCD 754

Query: 80  C 78
           C
Sbjct: 755 C 755

>RARB_HUMAN (P10826) Retinoic acid receptor beta (RAR-beta) (RAR-epsilon)|
           (HBV-activated protein)
          Length = 455

 Score = 25.8 bits (55), Expect(2) = 4.7
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = -3

Query: 143 PPPLAYSPCF--RNKKTCYH 90
           PPP  Y PCF  ++K + YH
Sbjct: 80  PPPRVYKPCFVCQDKSSGYH 99



 Score = 21.2 bits (43), Expect(2) = 4.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 208 PPPKTLDSSSSSCLEYEWNVPAPL 137
           P P T+++ S+S  E   + P+PL
Sbjct: 56  PSPATIETQSTSSEELVPSPPSPL 79

>CX1A_NAJAT (Q98957) Cardiotoxin 1a precursor|
          Length = 81

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 185 IIIIMLGI*MECSSPPPLAYSPCFRNKKTCY 93
           I+ + LG  ++C+  PP+A   C   K  CY
Sbjct: 13  IVCLDLGYTLKCNKLPPIASKTCPAGKNLCY 43

>RARB_CHICK (P22448) Retinoic acid receptor beta (RAR-beta)|
          Length = 455

 Score = 25.8 bits (55), Expect(2) = 6.0
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = -3

Query: 143 PPPLAYSPCF--RNKKTCYH 90
           PPP  Y PCF  ++K + YH
Sbjct: 80  PPPRVYKPCFVCQDKSSGYH 99



 Score = 20.8 bits (42), Expect(2) = 6.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 208 PPPKTLDSSSSSCLEYEWNVPAPL 137
           P P T+++ S+S  E   + P+PL
Sbjct: 56  PSPATVETQSTSSEELVPSPPSPL 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,287,208
Number of Sequences: 219361
Number of extensions: 981024
Number of successful extensions: 2272
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2270
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)