ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast76c05 |
|---|---|
| Clone Library Name | barley_pub |
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 44.7 bits (104), Expect = 5e-05 Identities = 24/41 (58%), Positives = 29/41 (70%) Frame = -2 Query: 405 RLLVVELFLRYDTFTAKVGLDLLGTKVEFTGVTKATSGVAD 283 RLL+VELFLRYDTFTA+ G KV TGVTKA++ + Sbjct: 440 RLLLVELFLRYDTFTAEA-----GKKVVITGVTKASTSAVN 475
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 43.9 bits (102), Expect = 9e-05 Identities = 21/36 (58%), Positives = 26/36 (72%) Frame = -2 Query: 405 RLLVVELFLRYDTFTAKVGLDLLGTKVEFTGVTKAT 298 RLL+VELFLRYD+F +VG LG+ V T + KAT Sbjct: 476 RLLLVELFLRYDSFDVEVGTSTLGSSVTVTSLKKAT 511
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 38.9 bits (89), Expect = 0.003 Identities = 17/36 (47%), Positives = 25/36 (69%) Frame = -2 Query: 405 RLLVVELFLRYDTFTAKVGLDLLGTKVEFTGVTKAT 298 RL V+E+F RYD+F +VG LG+ V F+ + KA+ Sbjct: 482 RLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKAS 517
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 37.7 bits (86), Expect = 0.007 Identities = 20/38 (52%), Positives = 25/38 (65%) Frame = -2 Query: 405 RLLVVELFLRYDTFTAKVGLDLLGTKVEFTGVTKATSG 292 RL+V ELF RYDTF A V + V FT +T+A+SG Sbjct: 463 RLMVAELFRRYDTFAADVVEAPVEPVVTFTSLTRASSG 500
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/36 (47%), Positives = 23/36 (63%) Frame = -2 Query: 405 RLLVVELFLRYDTFTAKVGLDLLGTKVEFTGVTKAT 298 RL VVELF RYD+F +VG LG + T + ++T Sbjct: 500 RLFVVELFKRYDSFDIEVGTSSLGASITLTSLKRST 535
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 33.5 bits (75), Expect = 0.12 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = -2 Query: 405 RLLVVELFLRYDTFTAKVGLDLLGTKVEFTGVTKAT 298 RL V+ELF RYD+F ++G LG V T + +A+ Sbjct: 437 RLFVIELFRRYDSFEIELGESPLGAAVTLTFLKRAS 472
>BLI4_CAEEL (P51559) Endoprotease bli-4 precursor (EC 3.4.21.-) (Blisterase)| (Blistered cuticle protein 4) Length = 943 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = +3 Query: 45 YYTGQDCQK*TQHTHTYTRAQCCEATEQDACTCMTDSYVHY 167 Y G C+ + H HT T+A+ CE D+ HY Sbjct: 722 YLDGDKCKMCSSHCHTCTKAEVCETCPGSLLLIDVDNMPHY 762
>YHR1_HCMVA (P09702) Hypothetical protein HHRF1| Length = 156 Score = 30.8 bits (68), Expect = 0.80 Identities = 24/63 (38%), Positives = 28/63 (44%) Frame = -1 Query: 358 QSRPRPSRHQG*VHRRHQGNVRCGRRCLNPSPDGHR*QRDQRRAATILTPPSRTYVRASL 179 +S RPS G + Q VR R P+ D +R RD R A T P S R SL Sbjct: 64 RSENRPSVRTG---AQKQPAVRATERFTAPAADSYR--RDVRAAGTSALPASPPRARPSL 118 Query: 178 YLP 170 Y P Sbjct: 119 YSP 121
>GP124_HUMAN (Q96PE1) Probable G-protein coupled receptor 124 precursor (Tumor| endothelial marker 5) Length = 1331 Score = 30.8 bits (68), Expect = 0.80 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -1 Query: 361 GQSRPRPSRHQG*VHRRHQGNVRCGRRCLNPSPDGHR 251 G+ P P+ +G + RH NV GRR GHR Sbjct: 1148 GEGEPEPAGTRGNLAHRHPNNVHHGRRAHKSRAKGHR 1184
>CERU_RAT (P13635) Ceruloplasmin precursor (EC 1.16.3.1) (Ferroxidase)| Length = 1059 Score = 30.8 bits (68), Expect = 0.80 Identities = 17/71 (23%), Positives = 32/71 (45%) Frame = +1 Query: 1 TVRQKGESYCRKVRLITLGKIAKSKHNTRTHTRGRNAAKQPNKMHAHA*LTRTYTTKVDI 180 T R++ + + L LG + + + +N A +P +HAH T++ T + Sbjct: 785 TFREQVKRRAEEEHLGMLGPLIHADVGAKVKVVFKNMATRPYSIHAHGVKTKSSTVAPTL 844 Query: 181 ARHVRTYVMAV 213 VRTY+ + Sbjct: 845 PGEVRTYIWQI 855
>PYRDB_LACLC (P54322) Dihydroorotate dehydrogenase B, catalytic subunit (EC| 1.3.3.1) (Dihydroorotate oxidase B) (DHOdehase B) (DHODase B) (DHOD B) Length = 311 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 Query: 257 PSVTKGSTQGSNDPYTAITYVRTCLAISTLVVYVRVS 147 P+V G DP A V+ C A+S + +YV++S Sbjct: 136 PNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLS 172
>SWR1_CANGA (Q6FK48) Helicase SWR1 (EC 3.6.1.-)| Length = 1450 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +1 Query: 253 DGRPVKDLNSVCHTGRCLGDAGELNLGAEKVEADFGREGVVPEEQL 390 DGR + +V G + GEL LG ++ + G++P E+L Sbjct: 1104 DGRTTIEKFAVLTPGAVTSNIGELTLGMDEFVTPNSKSGIIPYEEL 1149
>PYRDB_LACLA (Q9CFW8) Dihydroorotate dehydrogenase B, catalytic subunit (EC| 1.3.3.1) (Dihydroorotate oxidase B) (DHOdehase B) (DHODase B) (DHOD B) Length = 311 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 Query: 257 PSVTKGSTQGSNDPYTAITYVRTCLAISTLVVYVRVS 147 P+V G DP A V+ C A+S + +YV++S Sbjct: 136 PNVKHGGQAFGTDPDVAAALVKACKAVSKVPLYVKLS 172
>SYCP2_RAT (O70608) Synaptonemal complex protein 2 (SCP-2) (Synaptonemal| complex lateral element protein) (rnSCP2) Length = 1505 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = -1 Query: 358 QSRPRPSRHQG*VHRRHQGNVRCGRRCLNP-SPDGHR*QRDQRRAATILTPPSRTYV-RA 185 +S+P P + + +H + + N++ ++ NP PD QRD++ + +T PSR + A Sbjct: 424 ESQPSPVK-ENLIHLKEKSNLQ--KKLTNPLEPDNSSSQRDRKNSQDEITTPSRKKMSEA 480 Query: 184 SLYLP 170 S+ +P Sbjct: 481 SMIVP 485
>GP124_MOUSE (Q91ZV8) Probable G-protein coupled receptor 124 precursor (Tumor| endothelial marker 5) Length = 1329 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/37 (35%), Positives = 17/37 (45%) Frame = -1 Query: 361 GQSRPRPSRHQG*VHRRHQGNVRCGRRCLNPSPDGHR 251 G P P+ +G + RH N+ GRR GHR Sbjct: 1144 GDGEPEPTGSRGSLAPRHHNNLHHGRRVHKSRAKGHR 1180
>ATS4_MOUSE (Q8BNJ2) ADAMTS-4 precursor (EC 3.4.24.82) (A disintegrin and| metalloproteinase with thrombospondin motifs 4) (ADAM-TS 4) (ADAM-TS4) (Aggrecanase 1) Length = 833 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +1 Query: 235 VDPFVTDGRPVK-DLNSVCHTGRCLGDAGELNLGAEK 342 ++P V DG P D +SVC GRC+ + +G++K Sbjct: 630 LEPRVADGTPCSPDTSSVCVQGRCIHAGCDRIIGSKK 666
>YNF7_RHIME (Q52992) Hypothetical 25.1 kDa protein in nfe locus (ORFB) (ORF7)| Length = 232 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -1 Query: 319 HRRHQGNVRCGRRCLNPSP 263 H RH N+R G RC N SP Sbjct: 96 HARHDTNLRTGERCPNESP 114
>ATS4_HUMAN (O75173) ADAMTS-4 precursor (EC 3.4.24.82) (A disintegrin and| metalloproteinase with thrombospondin motifs 4) (ADAM-TS 4) (ADAM-TS4) (Aggrecanase 1) (ADMP-1) Length = 837 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +1 Query: 235 VDPFVTDGRPVK-DLNSVCHTGRCLGDAGELNLGAEK 342 ++P V DG P D +SVC GRC+ + +G++K Sbjct: 634 LEPRVVDGTPCSPDSSSVCVQGRCIHAGCDRIIGSKK 670
>DAK_PICPA (O74192) Dihydroxyacetone kinase (EC 2.7.1.29) (Glycerone kinase)| (DHA kinase) Length = 608 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%) Frame = +1 Query: 220 SLLPCVDPFVTDGRPVKDL---NSVCHTGRCLGDAGELNLGAEKVEADFGREGVVPEEQL 390 +L+ ++PFV + KDL N H G K+EA FGR V EE+ Sbjct: 523 TLIDALEPFVKEFAKSKDLKLANKAAHDGA---------EATRKLEAKFGRASYVAEEEF 573 Query: 391 HHQE 402 E Sbjct: 574 KQFE 577
>MYT1L_RAT (P70475) Myelin transcription factor 1-like protein (MyT1L protein)| (Neural zinc finger factor 1) (NZF-1) Length = 1187 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +2 Query: 209 RCKDRCCPALIPLSPMA 259 R +D CCP L PL PM+ Sbjct: 780 RPRDSCCPVLTPLEPMS 796
>MYT1L_MOUSE (P97500) Myelin transcription factor 1-like protein (MyT1L protein)| (Postmitotic neural gene 1 protein) (Zinc finger protein Png-1) (Neural zinc finger factor 1) (NZF-1) Length = 1187 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +2 Query: 209 RCKDRCCPALIPLSPMA 259 R +D CCP L PL PM+ Sbjct: 782 RPRDSCCPVLTPLEPMS 798
>ATS4_RAT (Q9ESP7) ADAMTS-4 precursor (EC 3.4.24.82) (A disintegrin and| metalloproteinase with thrombospondin motifs 4) (ADAM-TS 4) (ADAM-TS4) (Aggrecanase 1) (Fragment) Length = 630 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +1 Query: 235 VDPFVTDGRPVK-DLNSVCHTGRCLGDAGELNLGAEK 342 ++P V DG P D +SVC GRC+ + +G++K Sbjct: 427 LEPRVADGTPCSPDSSSVCVQGRCIHAGCDRIIGSKK 463
>EXPA_DROME (Q07436) Protein expanded| Length = 1427 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 13/70 (18%) Frame = -2 Query: 270 LHRTAIGDKGINAGQQRSLHRHHVRTY-----------VPRYIYLS--SVRTSQSCMCMH 130 L + ++ + G Q SLH HHV ++ VP ++ S S+ QSC+ + Sbjct: 933 LSQQSLHNSNYAGGSQASLHHHHVPSHHRHSGSAAIGIVPYGLHKSTASLHHQQSCVLLP 992 Query: 129 LVRLLRSIAP 100 +++ + +AP Sbjct: 993 VIKPRQFLAP 1002
>MCH1_KLULA (Q6CPY8) Probable transporter MCH1| Length = 479 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Frame = -2 Query: 192 YVPRYIYLSSV--RTSQSCMCMHLVRL-LRSIAPSCMCACVVFTFGNLAQCNKPDFSTIR 22 +VP Y+YLS V S C + +V + IA S + C + T L K +I Sbjct: 104 FVPSYLYLSCVFQLGSDPCFALSVVAFAIVGIATSSLYFCALITCAKLYPDTK--LLSIS 161 Query: 21 FPLLAYG 1 FP +G Sbjct: 162 FPTTCFG 168
>DAPF_BUCAP (Q8K901) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = -2 Query: 273 ILHRTAIGDKGINAGQQRSLHRHHVRTYVPRYIYLSSVRTSQSCMCMHLVRLLRSIAPSC 94 +L + +I +GIN G + ++++H++ V Y V +QSC + IA + Sbjct: 188 LLEKNSIFPQGINVGFMKVINKNHIQLRV----YERDVGETQSCGSGACAAVAVGIAKNL 243 Query: 93 MC 88 +C Sbjct: 244 LC 245
>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)| (MyT1-L) Length = 1186 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +2 Query: 209 RCKDRCCPALIPLSPMA 259 R +D CCP L PL PM+ Sbjct: 781 RPRDSCCPILTPLEPMS 797
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +1 Query: 256 GRPV-KDLNSVCHTGRCLGDAGELNLGAEKVEADFGREGVVPEE-QLHH 396 GRP DL+++C T A L A + D+ E V PEE Q HH Sbjct: 2113 GRPRGSDLSTICDTSPMKRSASVLGPKASRRLDDYSLERVPPEENQRHH 2161
>GPR87_HUMAN (Q9BY21) Probable G-protein coupled receptor 87 (G-protein coupled| receptor 95) Length = 358 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/20 (45%), Positives = 16/20 (80%) Frame = -3 Query: 215 YTAITYVRTCLAISTLVVYV 156 +TA+TYV +CL ++ LV+ + Sbjct: 204 HTAVTYVNSCLFVAVLVILI 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,910,529 Number of Sequences: 219361 Number of extensions: 1208210 Number of successful extensions: 2770 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2686 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2768 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
