ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast75h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 333 2e-88
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 333 2e-88
3dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 2e-88
4dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 5e-65
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
6dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
7dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 90 6e-15
8ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predic... 50 0.005
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
10dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
11dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.005
12gb|DQ485150.1| Burkholderia cepacia MPS gene, partial sequence 46 0.082
13gb|AF185273.1|AF185273 Burkholderia cepacia unknown sequence 46 0.082
14ref|XM_550168.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
15ref|XM_476345.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
16gb|AC145433.2| Pan troglodytes BAC clone RP43-43I4 from 7, compl... 42 1.3
17gb|AC142317.1| Pan troglodytes BAC clone RP43-52L16 from 7, comp... 42 1.3
18emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52),... 42 1.3
19gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of... 42 1.3
20dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
23gb|AC010002.6|AC010002 Homo sapiens chromosome 7 clone RP11-194N... 42 1.3
24dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
25dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
26dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
27dbj|AK120703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
28gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.3
29gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
30emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.3
31emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC OJ1471... 42 1.3
32ref|XM_550169.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.1
33ref|NM_190569.1| Oryza sativa (japonica cultivar-group), predic... 40 5.1
34ref|NM_186687.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.1
35gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.1
36gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.1
37gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, comple... 40 5.1
38gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, co... 40 5.1
39emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O... 40 5.1
40emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.1
41gb|BC075800.1| Homo sapiens protein kinase, cAMP-dependent, regu... 40 5.1
42dbj|AK128639.1| Homo sapiens cDNA FLJ46798 fis, clone TRACH30316... 40 5.1
43dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.1
44dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
45gb|AC069141.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 5.1
46dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
47gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, co... 40 5.1
48dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.1
49emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on ch... 40 5.1 
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  333 bits (168), Expect = 2e-88
 Identities = 270/304 (88%)
 Strand = Plus / Minus

                                                                         
Query: 77    aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 136
             ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 89775 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 89716

                                                                         
Query: 137   gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 196
             |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 89715 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 89656

                                                                         
Query: 197   gacgtccgcggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcg 256
             |||||   ||  ||| |||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct: 89655 gacgtttccgacgccacgccgccgtccaccacaccgaggcagagagcgccgcccttggtg 89596

                                                                         
Query: 257   gccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcaccagc 316
             |||||||||||||| |||||||||||||||||||||| ||||||| |||| | |||||||
Sbjct: 89595 gccaccatcgagttcgccccgaacaccacccacgacgtggcctcgctctggaacaccagc 89536

                                                                         
Query: 317   tccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtagcac 376
             || ||||||||||||||||| |||||||| |||| | |||||||||||||||||||||||
Sbjct: 89535 tcgaccgtcggcacggccggccccacgcgtgtgcccgccaccttgctcccgtcgtagcac 89476

                 
Query: 377   agct 380
             ||||
Sbjct: 89475 agct 89472



 Score =  268 bits (135), Expect = 1e-68
 Identities = 264/307 (85%)
 Strand = Plus / Minus

                                                                         
Query: 74    ccaaggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagc 133
             |||||| | ||| ||||||||||||||||| | ||| | ||| ||||| |||| || |||
Sbjct: 96657 ccaaggtgaaagctgttgcaggtcgtctgcagcaacgggaggtaggaggtgaaacccagc 96598

                                                                         
Query: 134   ctcgcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcacc 193
             |  | || || ||| ||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 96597 cgtgacccctccaggtcgaactccagcaggttgtcctccatcatgtgtccgccgatcacc 96538

                                                                         
Query: 194   accgacgtccgcggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttg 253
             |||||||||  ||||||  |||| || ||||| ||||||| ||||||||||||| |||||
Sbjct: 96537 accgacgtctccggggctacgcctccatccacaacgccgaagcagagcgcgccgtccttg 96478

                                                                         
Query: 254   gcggccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcacc 313
             | ||||||||| ||||| ||||||||||||||||||||| |||| | | |||||||||||
Sbjct: 96477 gtggccaccatagagttcgccccgaacaccacccacgacacggctttgctctgcagcacc 96418

                                                                         
Query: 314   agctccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtag 373
             ||||| || |||||||||||||| ||| ||||||||||||||||| || |||||||||||
Sbjct: 96417 agctcgacggtcggcacggccggccccgcgcgggtgctccccaccatggtcccgtcgtag 96358

                    
Query: 374   cacagct 380
             || ||||
Sbjct: 96357 caaagct 96351



 Score =  256 bits (129), Expect = 5e-65
 Identities = 204/229 (89%)
 Strand = Plus / Minus

                                                                          
Query: 152    aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggggcc 211
              |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||  ||
Sbjct: 103640 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcggctcc 103581

                                                                          
Query: 212    gcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcggccaccatcgagttg 271
              | |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 103580 gtgccggcgtccaccacgccgaggcagagcgcgcctcccttggtggccaccatcgagttc 103521

                                                                          
Query: 272    gccccgaacaccacccacgacgcggcctcgttctgcagcaccagctccaccgtcggcacg 331
              ||||||||||| |||||||| ||  ||  | | |||||||||||||| |  |||||||||
Sbjct: 103520 gccccgaacacaacccacgaggcacccgtgctttgcagcaccagctcgatggtcggcacg 103461

                                                               
Query: 332    gccgggcccacgcgggtgctccccaccttgctcccgtcgtagcacagct 380
              ||||| |||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 103460 gccggccccacgcgcgtgctccccaccttcctcccgtcgtagcacagct 103412



 Score =  256 bits (129), Expect = 5e-65
 Identities = 263/307 (85%), Gaps = 3/307 (0%)
 Strand = Plus / Minus

                                                                         
Query: 77    aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 136
             ||||| ||||||||||||||||||||||| ||| | ||| |||||||||| || |||| |
Sbjct: 92274 aggcgaaagttgttgcaggtcgtctgccgcaacgggaggtaggagctgaaacccagccgc 92215

                                                                         
Query: 137   gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 196
             | || || ||| || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 92214 gacccctccaggtcaaactccagcaggttgtcctccatcatgtgcccgccgatcaccacc 92155

                                                                         
Query: 197   gacgtccg---cggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttg 253
             || | | |   | | || | |||||||||||||||||| |||||||||||||||||||||
Sbjct: 92154 gatgacggatacagcgcggggccgccgtccaccacgccaaggcagagcgcgccgcccttg 92095

                                                                         
Query: 254   gcggccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcacc 313
             |||| |||||||||||| |||||| |||  | ||||||| |||||||  |||||||||||
Sbjct: 92094 gcgggcaccatcgagtttgccccgtacatgatccacgacacggcctccctctgcagcacc 92035

                                                                         
Query: 314   agctccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtag 373
             ||||| | ||||||||| || || ||| ||||||||||||| || |||| ||||||||||
Sbjct: 92034 agctcaatcgtcggcaccgctggccccgcgcgggtgctccctactttgcgcccgtcgtag 91975

                    
Query: 374   cacagct 380
             |||||||
Sbjct: 91974 cacagct 91968
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  333 bits (168), Expect = 2e-88
 Identities = 270/304 (88%)
 Strand = Plus / Minus

                                                                            
Query: 77       aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 136
                ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 19489063 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 19489004

                                                                            
Query: 137      gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 196
                |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 19489003 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 19488944

                                                                            
Query: 197      gacgtccgcggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcg 256
                |||||   ||  ||| |||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct: 19488943 gacgtttccgacgccacgccgccgtccaccacaccgaggcagagagcgccgcccttggtg 19488884

                                                                            
Query: 257      gccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcaccagc 316
                |||||||||||||| |||||||||||||||||||||| ||||||| |||| | |||||||
Sbjct: 19488883 gccaccatcgagttcgccccgaacaccacccacgacgtggcctcgctctggaacaccagc 19488824

                                                                            
Query: 317      tccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtagcac 376
                || ||||||||||||||||| |||||||| |||| | |||||||||||||||||||||||
Sbjct: 19488823 tcgaccgtcggcacggccggccccacgcgtgtgcccgccaccttgctcccgtcgtagcac 19488764

                    
Query: 377      agct 380
                ||||
Sbjct: 19488763 agct 19488760



 Score =  268 bits (135), Expect = 1e-68
 Identities = 264/307 (85%)
 Strand = Plus / Minus

                                                                            
Query: 74       ccaaggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagc 133
                |||||| | ||| ||||||||||||||||| | ||| | ||| ||||| |||| || |||
Sbjct: 19495945 ccaaggtgaaagctgttgcaggtcgtctgcagcaacgggaggtaggaggtgaaacccagc 19495886

                                                                            
Query: 134      ctcgcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcacc 193
                |  | || || ||| ||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 19495885 cgtgacccctccaggtcgaactccagcaggttgtcctccatcatgtgtccgccgatcacc 19495826

                                                                            
Query: 194      accgacgtccgcggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttg 253
                |||||||||  ||||||  |||| || ||||| ||||||| ||||||||||||| |||||
Sbjct: 19495825 accgacgtctccggggctacgcctccatccacaacgccgaagcagagcgcgccgtccttg 19495766

                                                                            
Query: 254      gcggccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcacc 313
                | ||||||||| ||||| ||||||||||||||||||||| |||| | | |||||||||||
Sbjct: 19495765 gtggccaccatagagttcgccccgaacaccacccacgacacggctttgctctgcagcacc 19495706

                                                                            
Query: 314      agctccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtag 373
                ||||| || |||||||||||||| ||| ||||||||||||||||| || |||||||||||
Sbjct: 19495705 agctcgacggtcggcacggccggccccgcgcgggtgctccccaccatggtcccgtcgtag 19495646

                       
Query: 374      cacagct 380
                || ||||
Sbjct: 19495645 caaagct 19495639



 Score =  256 bits (129), Expect = 5e-65
 Identities = 204/229 (89%)
 Strand = Plus / Minus

                                                                            
Query: 152      aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggggcc 211
                |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||  ||
Sbjct: 19502928 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcggctcc 19502869

                                                                            
Query: 212      gcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcggccaccatcgagttg 271
                | |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 19502868 gtgccggcgtccaccacgccgaggcagagcgcgcctcccttggtggccaccatcgagttc 19502809

                                                                            
Query: 272      gccccgaacaccacccacgacgcggcctcgttctgcagcaccagctccaccgtcggcacg 331
                ||||||||||| |||||||| ||  ||  | | |||||||||||||| |  |||||||||
Sbjct: 19502808 gccccgaacacaacccacgaggcacccgtgctttgcagcaccagctcgatggtcggcacg 19502749

                                                                 
Query: 332      gccgggcccacgcgggtgctccccaccttgctcccgtcgtagcacagct 380
                ||||| |||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 19502748 gccggccccacgcgcgtgctccccaccttcctcccgtcgtagcacagct 19502700



 Score =  256 bits (129), Expect = 5e-65
 Identities = 263/307 (85%), Gaps = 3/307 (0%)
 Strand = Plus / Minus

                                                                            
Query: 77       aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 136
                ||||| ||||||||||||||||||||||| ||| | ||| |||||||||| || |||| |
Sbjct: 19491562 aggcgaaagttgttgcaggtcgtctgccgcaacgggaggtaggagctgaaacccagccgc 19491503

                                                                            
Query: 137      gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 196
                | || || ||| || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 19491502 gacccctccaggtcaaactccagcaggttgtcctccatcatgtgcccgccgatcaccacc 19491443

                                                                            
Query: 197      gacgtccg---cggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttg 253
                || | | |   | | || | |||||||||||||||||| |||||||||||||||||||||
Sbjct: 19491442 gatgacggatacagcgcggggccgccgtccaccacgccaaggcagagcgcgccgcccttg 19491383

                                                                            
Query: 254      gcggccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcacc 313
                |||| |||||||||||| |||||| |||  | ||||||| |||||||  |||||||||||
Sbjct: 19491382 gcgggcaccatcgagtttgccccgtacatgatccacgacacggcctccctctgcagcacc 19491323

                                                                            
Query: 314      agctccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtag 373
                ||||| | ||||||||| || || ||| ||||||||||||| || |||| ||||||||||
Sbjct: 19491322 agctcaatcgtcggcaccgctggccccgcgcgggtgctccctactttgcgcccgtcgtag 19491263

                       
Query: 374      cacagct 380
                |||||||
Sbjct: 19491262 cacagct 19491256
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>dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A08, full
            insert sequence
          Length = 1474

 Score =  333 bits (168), Expect = 2e-88
 Identities = 270/304 (88%)
 Strand = Plus / Minus

                                                                        
Query: 77   aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 136
            ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 1343 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 1284

                                                                        
Query: 137  gcccgctgcagatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 196
            |  | |  ||| || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 1283 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 1224

                                                                        
Query: 197  gacgtccgcggggccgcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcg 256
            |||||   ||  ||| |||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct: 1223 gacgtttccgacgccacgccgccgtccaccacaccgaggcagagagcgccgcccttggtg 1164

                                                                        
Query: 257  gccaccatcgagttggccccgaacaccacccacgacgcggcctcgttctgcagcaccagc 316
            |||||||||||||| |||||||||||||||||||||| ||||||| |||| | |||||||
Sbjct: 1163 gccaccatcgagttcgccccgaacaccacccacgacgtggcctcgctctggaacaccagc 1104

                                                                        
Query: 317  tccaccgtcggcacggccgggcccacgcgggtgctccccaccttgctcccgtcgtagcac 376
            || ||||||||||||||||| |||||||| |||| | |||||||||||||||||||||||
Sbjct: 1103 tcgaccgtcggcacggccggccccacgcgtgtgcccgccaccttgctcccgtcgtagcac 1044

                
Query: 377  agct 380
            ||||
Sbjct: 1043 agct 1040
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>dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148M15, full
            insert sequence
          Length = 1741

 Score =  256 bits (129), Expect = 5e-65
 Identities = 204/229 (89%)
 Strand = Plus / Minus

                                                                        
Query: 152  aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggggcc 211
            |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||  ||
Sbjct: 1519 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcggctcc 1460

                                                                        
Query: 212  gcgccgccgtccaccacgccgaggcagagcgcgccgcccttggcggccaccatcgagttg 271
            | |||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| 
Sbjct: 1459 gtgccggcgtccaccacgccgaggcagagcgcgcctcccttggtggccaccatcgagttc 1400

                                                                        
Query: 272  gccccgaacaccacccacgacgcggcctcgttctgcagcaccagctccaccgtcggcacg 331
            ||||||||||| |||||||| ||  ||  | | |||||||||||||| |  |||||||||
Sbjct: 1399 gccccgaacacaacccacgaggcacccgtgctttgcagcaccagctcgatggtcggcacg 1340

                                                             
Query: 332  gccgggcccacgcgggtgctccccaccttgctcccgtcgtagcacagct 380
            ||||| |||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 1339 gccggccccacgcgcgtgctccccaccttcctcccgtcgtagcacagct 1291
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                            
Query: 149      tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggg 208
                |||||| |||||||| | ||||||||| |||| || ||||||||||||| || |  ||| 
Sbjct: 15506035 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccggcgcctccggc 15505976

                                                         
Query: 209      gccgcgccgccgtccaccacgccgaggcagagcgcgccgcc 249
                ||||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 15505975 gccgctccgccgtccaccacggcgaggcagagcgccccgcc 15505935



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                                 
Query: 348      tgctccccaccttgctcccgtcgtagcacagct 380
                ||||| |||||||||||||||||||||||||||
Sbjct: 15505815 tgctctccaccttgctcccgtcgtagcacagct 15505783
to top
>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0689B09
          Length = 144932

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                         
Query: 149   tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggg 208
             |||||| |||||||| | ||||||||| |||| || ||||||||||||| || |  ||| 
Sbjct: 26890 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccggcgcctccggc 26831

                                                      
Query: 209   gccgcgccgccgtccaccacgccgaggcagagcgcgccgcc 249
             ||||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 26830 gccgctccgccgtccaccacggcgaggcagagcgccccgcc 26790



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                              
Query: 348   tgctccccaccttgctcccgtcgtagcacagct 380
             ||||| |||||||||||||||||||||||||||
Sbjct: 26670 tgctctccaccttgctcccgtcgtagcacagct 26638
to top
>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1299_A11
          Length = 160099

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                          
Query: 149    tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggg 208
              |||||| |||||||| | ||||||||| |||| || ||||||||||||| || |  ||| 
Sbjct: 155327 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccggcgcctccggc 155268

                                                       
Query: 209    gccgcgccgccgtccaccacgccgaggcagagcgcgccgcc 249
              ||||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 155267 gccgctccgccgtccaccacggcgaggcagagcgccccgcc 155227



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                               
Query: 348    tgctccccaccttgctcccgtcgtagcacagct 380
              ||||| |||||||||||||||||||||||||||
Sbjct: 155107 tgctctccaccttgctcccgtcgtagcacagct 155075
to top
>ref|NM_190069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1269

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 149  tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 197
            |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 1181 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 1133
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 149      tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 197
                |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 41126162 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 41126210



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 223     caccacgccgaggcagagcgc 243
               |||||||||||||||||||||
Sbjct: 2776452 caccacgccgaggcagagcgc 2776432



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 304      ctgcagcaccagctccaccg 323
                ||||||||||||||||||||
Sbjct: 36231887 ctgcagcaccagctccaccg 36231868



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 223     caccacgccgaggcagagcg 242
               ||||||||||||||||||||
Sbjct: 2782536 caccacgccgaggcagagcg 2782517
to top
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 149   tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 197
             |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 23217 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 23265
to top
>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full
            insert sequence
          Length = 1405

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 149  tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 197
            |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 1102 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 1054
to top
>gb|DQ485150.1| Burkholderia cepacia MPS gene, partial sequence
          Length = 1811

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 190  caccaccgacgtccgcggggccgcgcc 216
            ||||||||||||||||||| |||||||
Sbjct: 1638 caccaccgacgtccgcgggtccgcgcc 1664
to top
>gb|AF185273.1|AF185273 Burkholderia cepacia unknown sequence
          Length = 2351

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 190  caccaccgacgtccgcggggccgcgcc 216
            ||||||||||||||||||| |||||||
Sbjct: 1758 caccaccgacgtccgcgggtccgcgcc 1784
to top
>ref|XM_550168.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2374

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 223 caccacgccgaggcagagcgc 243
           |||||||||||||||||||||
Sbjct: 481 caccacgccgaggcagagcgc 461
to top
>ref|XM_476345.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1752

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 301  gttctgcagcaccagctccaccgtc 325
            |||||||||||||| ||||||||||
Sbjct: 1419 gttctgcagcaccacctccaccgtc 1395
to top
>gb|AC145433.2| Pan troglodytes BAC clone RP43-43I4 from 7, complete sequence
          Length = 179409

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 231   cgaggcagagcgcgccgccct 251
             |||||||||||||||||||||
Sbjct: 52859 cgaggcagagcgcgccgccct 52879
to top
>gb|AC142317.1| Pan troglodytes BAC clone RP43-52L16 from 7, complete sequence
          Length = 147345

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 231    cgaggcagagcgcgccgccct 251
              |||||||||||||||||||||
Sbjct: 132948 cgaggcagagcgcgccgccct 132928
to top
>emb|Z86099.2|HSV2HG52 Herpes simplex virus type 2 (strain HG52), complete genome
          Length = 154746

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 321   ccgtcggcacggccgggccca 341
             |||||||||||||||||||||
Sbjct: 83009 ccgtcggcacggccgggccca 83029
to top
>gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of the complete genome
          Length = 10886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 239  agcgcgccgcccttggcggccacca 263
            ||||||||||||||||||| |||||
Sbjct: 9834 agcgcgccgcccttggcggtcacca 9858
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 301     gttctgcagcaccagctccaccgtc 325
               |||||||||||||| ||||||||||
Sbjct: 9075077 gttctgcagcaccatctccaccgtc 9075053



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 301     gttctgcagcaccagctccaccgtc 325
               |||||||||||||| ||||||||||
Sbjct: 8873317 gttctgcagcaccatctccaccgtc 8873293
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
             complete sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 301   gttctgcagcaccagctccaccgtc 325
             |||||||||||||| ||||||||||
Sbjct: 58153 gttctgcagcaccacctccaccgtc 58177



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 228     cgccgaggcagagcgcgccg 247
               ||||||||||||||||||||
Sbjct: 7441037 cgccgaggcagagcgcgccg 7441056
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 212      gcgccgccgtccaccacgccg 232
                |||||||||||||||||||||
Sbjct: 20175099 gcgccgccgtccaccacgccg 20175079
to top
>gb|AC010002.6|AC010002 Homo sapiens chromosome 7 clone RP11-194N22, complete sequence
          Length = 169921

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 231    cgaggcagagcgcgccgccct 251
              |||||||||||||||||||||
Sbjct: 150167 cgaggcagagcgcgccgccct 150147
to top
>dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0007G12
          Length = 111819

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 212   gcgccgccgtccaccacgccg 232
             |||||||||||||||||||||
Sbjct: 41099 gcgccgccgtccaccacgccg 41079
to top
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0009G03
          Length = 163526

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 223   caccacgccgaggcagagcgc 243
             |||||||||||||||||||||
Sbjct: 82129 caccacgccgaggcagagcgc 82109



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   caccacgccgaggcagagcg 242
             ||||||||||||||||||||
Sbjct: 88213 caccacgccgaggcagagcg 88194
to top
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1026C12
          Length = 170240

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 301   gttctgcagcaccagctccaccgtc 325
             |||||||||||||| ||||||||||
Sbjct: 57452 gttctgcagcaccacctccaccgtc 57476
to top
>dbj|AK120703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170P19, full
           insert sequence
          Length = 2394

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 223 caccacgccgaggcagagcgc 243
           |||||||||||||||||||||
Sbjct: 481 caccacgccgaggcagagcgc 461
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 239     agcgcgccgcccttggcggccacca 263
               ||||||||||||| |||||||||||
Sbjct: 3289353 agcgcgccgccctgggcggccacca 3289377
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 301     gttctgcagcaccagctccaccgtc 325
               |||||||||||||| ||||||||||
Sbjct: 9074962 gttctgcagcaccatctccaccgtc 9074938



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 301     gttctgcagcaccagctccaccgtc 325
               |||||||||||||| ||||||||||
Sbjct: 8873200 gttctgcagcaccatctccaccgtc 8873176
to top
>emb|AL954154.5|CNS08CCS Oryza sativa chromosome 12, . BAC OSJNBb0072E04 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151176

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 301   gttctgcagcaccagctccaccgtc 325
             |||||||||||||| ||||||||||
Sbjct: 61946 gttctgcagcaccatctccaccgtc 61922
to top
>emb|AL713903.5|CNS07YQ3 Oryza sativa chromosome 12, . BAC OJ1471_C07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103007

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 301   gttctgcagcaccagctccaccgtc 325
             |||||||||||||| ||||||||||
Sbjct: 43016 gttctgcagcaccatctccaccgtc 43040
to top
>ref|XM_550169.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 caccacgccgaggcagagcg 242
           ||||||||||||||||||||
Sbjct: 348 caccacgccgaggcagagcg 329
to top
>ref|NM_190569.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1692

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  ctgcagcaccagctccaccg 323
            ||||||||||||||||||||
Sbjct: 1362 ctgcagcaccagctccaccg 1343
to top
>ref|NM_186687.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3015

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 cgccgaggcagagcgcgccg 247
           ||||||||||||||||||||
Sbjct: 571 cgccgaggcagagcgcgccg 552
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    cgaacaccacccacgacgcg 295
              ||||||||||||||||||||
Sbjct: 400431 cgaacaccacccacgacgcg 400412
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     cgaacaccacccacgacgcg 295
               ||||||||||||||||||||
Sbjct: 1131154 cgaacaccacccacgacgcg 1131135
to top
>gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, complete sequence
          Length = 196803

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    gcaagcacacatatcatctt 34
             ||||||||||||||||||||
Sbjct: 56902 gcaagcacacatatcatctt 56921
to top
>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence
          Length = 209936

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     acccaaggcggaagttgttgcagg 95
              ||||||||| ||||||||||||||
Sbjct: 191105 acccaaggctgaagttgttgcagg 191128
to top
>emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O16 on chromosome 22, complete
             sequence
          Length = 50502

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   cagggaggagctgaacccga 131
             ||||||||||||||||||||
Sbjct: 38983 cagggaggagctgaacccga 38964
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     cgaacaccacccacgacgcg 295
               ||||||||||||||||||||
Sbjct: 1012114 cgaacaccacccacgacgcg 1012095
to top
>gb|BC075800.1| Homo sapiens protein kinase, cAMP-dependent, regulatory, type II,
           beta, mRNA (cDNA clone MGC:87711 IMAGE:30331962),
           complete cds
          Length = 3745

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 141 gctgcagatcgaactccagcaggt 164
           |||||||| |||||||||||||||
Sbjct: 317 gctgcagagcgaactccagcaggt 294
to top
>dbj|AK128639.1| Homo sapiens cDNA FLJ46798 fis, clone TRACH3031660, highly  similar
           to cAMP-dependent protein kinase type II-beta regulatory
           chain
          Length = 3470

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 141 gctgcagatcgaactccagcaggt 164
           |||||||| |||||||||||||||
Sbjct: 127 gctgcagagcgaactccagcaggt 104
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    ctgcagcaccagctccaccg 323
              ||||||||||||||||||||
Sbjct: 114161 ctgcagcaccagctccaccg 114142
to top
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0406G08
          Length = 144233

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    ctgcagcaccagctccaccg 323
              ||||||||||||||||||||
Sbjct: 108900 ctgcagcaccagctccaccg 108881
to top
>gb|AC069141.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-23G24, complete
             sequence
          Length = 197264

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 307   cagcaccagctccaccgtcggcac 330
             |||||||||||||||| |||||||
Sbjct: 18955 cagcaccagctccaccatcggcac 18932
to top
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0061L20
          Length = 138926

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   cgccgaggcagagcgcgccg 247
             ||||||||||||||||||||
Sbjct: 19351 cgccgaggcagagcgcgccg 19370
to top
>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence
          Length = 248750

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 72    acccaaggcggaagttgttgcagg 95
             ||||||||| ||||||||||||||
Sbjct: 12934 acccaaggctgaagttgttgcagg 12957
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 313     cagctccaccgtcggcacggccgg 336
               ||||||||||||||||||| ||||
Sbjct: 2063641 cagctccaccgtcggcacgtccgg 2063664
to top
>emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on chromosome 11, complete
             sequence
          Length = 149561

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   actccagcaggttgtcctcc 172
             ||||||||||||||||||||
Sbjct: 28862 actccagcaggttgtcctcc 28881


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,666,073
Number of Sequences: 3902068
Number of extensions: 2666073
Number of successful extensions: 58485
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57358
Number of HSP's gapped (non-prelim): 1118
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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