| Clone Name | rbast75d02 |
|---|---|
| Clone Library Name | barley_pub |
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 31.6 bits (70), Expect = 0.87 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -3 Query: 434 VVNNVIPVSWKAGATYRSLVNY 369 V +NVIP +W+ GA Y+S VN+ Sbjct: 252 VASNVIPANWQPGAIYKSNVNF 273
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 31.2 bits (69), Expect = 1.1 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -3 Query: 434 VVNNVIPVSWKAGATYRSLVNY 369 V NVIP +WK +YRS+VN+ Sbjct: 238 VAYNVIPANWKPDESYRSIVNF 259
>YBF1_YEAST (P34217) Hypothetical 73.8 kDa protein in SAS3-SEC17 intergenic| region Length = 668 Score = 29.3 bits (64), Expect = 4.3 Identities = 18/72 (25%), Positives = 35/72 (48%) Frame = +1 Query: 100 LHHKLFSSTTKQRKRNKIQTNRRHASLGER*EAIEGRASTILAWPTLPLLTQASGHSRTH 279 +HH ++ Q ++ + QT + S ++ ++ + +T+ +P SG+S H Sbjct: 471 IHHSSQYNSADQPQQPQPQTQQNVQSAAQQQQSFLRQQATLTPSSRIP-----SGYSANH 525 Query: 280 IRINIYNPRSRN 315 +IN NP RN Sbjct: 526 YQINSVNPLLRN 537
>HEMN_RALEU (O34162) Oxygen-independent coproporphyrinogen III oxidase (EC| 1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase) Length = 491 Score = 29.3 bits (64), Expect = 4.3 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Frame = -1 Query: 112 ACGAVQLMLHAHVPSCVSVCF---CSAILERN 26 AC A L L+ H+P C ++C+ C+ I+ R+ Sbjct: 57 ACRADALSLYLHIPFCENICYYCGCNKIITRD 88
>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)| (Ath-ExpBeta-1.3) Length = 264 Score = 29.3 bits (64), Expect = 4.3 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -3 Query: 434 VVNNVIPVSWKAGATYRSLVNYP 366 + VIP W GA Y S VN+P Sbjct: 236 IAKGVIPEKWSPGAIYHSKVNFP 258
>XKDD_BACSU (P39783) Phage-like element PBSX protein xkdD| Length = 116 Score = 28.9 bits (63), Expect = 5.7 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -1 Query: 361 LASNQEVQSNLEPWVNFYCGDYKYLYVYASGNGRRLVSEEEE 236 LA ++ + + PW CGD K +Y+Y++ SEEE+ Sbjct: 4 LAKTKQAEKSPAPWRAVPCGDTKPIYIYSA------YSEEEK 39
>YD56_SCHPO (Q10309) Putative phospholipid-transporting ATPase C6C3.06c (EC| 3.6.3.1) Length = 1033 Score = 28.9 bits (63), Expect = 5.7 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +1 Query: 46 CKNTHSHNLVHGRATLVALHHKLFSSTTKQRKR 144 C N H+ +VH A + ++HH + T +KR Sbjct: 235 CSNQHTEGIVHADAPIKSVHHFYGTFTLNNQKR 267
>ZIMP7_HUMAN (Q8NF64) PIAS-like protein Zimp7| Length = 920 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 406 GRPEPPTAPWLTTPKLASNQEVQSNLEP 323 G P PP P + P ++ NQEV+S P Sbjct: 372 GNPTPPMTPSSSVPYMSPNQEVKSPFLP 399
>GLMS_CHLCV (Q821Z7) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 608 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -1 Query: 367 PKLASNQEVQSNLEPWVNFYCGDYKYLYVYASGNGRRLV 251 P+L + NL W N YC + +++++ GRRL+ Sbjct: 442 PELCNRLLANENLHSWANDYCDEDRFIFL-----GRRLM 475
>OS25_PLARE (P19455) 25 kDa ookinete surface antigen precursor (Prs25)| Length = 217 Score = 28.1 bits (61), Expect = 9.7 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -3 Query: 122 EEKSLWCSATNVARPCTKLCECVFLQRNP 36 EEK L C T V +PC +C+ + +P Sbjct: 59 EEKVLKCDETTVNKPCGDFSKCIKIDGSP 87
>ZFP37_HUMAN (Q9Y6Q3) Zinc finger protein 37 homolog (Zfp-37)| Length = 597 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = +1 Query: 58 HSHNLVHGRATLVALHHKLFSSTTKQRKRNKIQTNRRHASL 180 HS N V ++ H K F+ + ++ K QT ++H L Sbjct: 160 HSRNCVKRKSDAAKEHKKSFNHSLSDTRKGKKQTGKKHEKL 200
>LYS2_PENCH (O74298) L-aminoadipate-semialdehyde dehydrogenase large subunit| (EC 1.2.1.31) (Alpha-aminoadipate reductase) (Alpha-AR) Length = 1409 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Frame = -1 Query: 379 WLTTPKL-ASNQEVQSNLEPWVNFYCGDYKYLY 284 W P++ A + +S EPW FY G LY Sbjct: 662 WFVNPEIWAEKDQAESRNEPWRQFYVGPRDRLY 694 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,566,960 Number of Sequences: 219361 Number of extensions: 1163353 Number of successful extensions: 2918 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2865 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2918 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)