| Clone Name | rbast74h05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete sequence Length = 50000 Score = 103 bits (52), Expect = 4e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 275 cgaggaggcggcgatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgt 334 ||||| || |||||||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct: 31900 cgaggtggtggcgatctgtatggtgaagttgcaggcggcggtggacgggtccgtctgcgt 31959 Query: 335 gggcacggcgag 346 |||||||||||| Sbjct: 31960 gggcacggcgag 31971
>ref|XM_469954.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2252 Score = 97.6 bits (49), Expect = 2e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 275 cgaggaggcggcgatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgt 334 ||||| ||||||||||||||| | |||||||||||| | ||||||||||||||||||||| Sbjct: 1987 cgaggtggcggcgatctgtattgtgaagttgcaggccggggtggaggggtcggtctgcgt 1928 Query: 335 gggcacggcgagc 347 ||||| ||||||| Sbjct: 1927 gggcatggcgagc 1915
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 97.6 bits (49), Expect = 2e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 275 cgaggaggcggcgatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgt 334 ||||| ||||||||||||||| | |||||||||||| | ||||||||||||||||||||| Sbjct: 74840 cgaggtggcggcgatctgtattgtgaagttgcaggccggggtggaggggtcggtctgcgt 74899 Query: 335 gggcacggcgagc 347 ||||| ||||||| Sbjct: 74900 gggcatggcgagc 74912
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 2e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 275 cgaggaggcggcgatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgt 334 ||||| ||||||||||||||| | |||||||||||| | ||||||||||||||||||||| Sbjct: 32669067 cgaggtggcggcgatctgtattgtgaagttgcaggccggggtggaggggtcggtctgcgt 32669008 Query: 335 gggcacggcgagc 347 ||||| ||||||| Sbjct: 32669007 gggcatggcgagc 32668995 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 cgatctgtatggggaagttgcaggcg 311 |||||||||||| ||||||||||||| Sbjct: 25340266 cgatctgtatggtgaagttgcaggcg 25340241
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 2e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 275 cgaggaggcggcgatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgt 334 ||||| ||||||||||||||| | |||||||||||| | ||||||||||||||||||||| Sbjct: 32759577 cgaggtggcggcgatctgtattgtgaagttgcaggccggggtggaggggtcggtctgcgt 32759518 Query: 335 gggcacggcgagc 347 ||||| ||||||| Sbjct: 32759517 gggcatggcgagc 32759505 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 cgatctgtatggggaagttgcaggcg 311 |||||||||||| ||||||||||||| Sbjct: 25431575 cgatctgtatggtgaagttgcaggcg 25431550
>ref|XM_476739.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2008 Score = 48.1 bits (24), Expect = 0.019 Identities = 51/60 (85%) Strand = Plus / Minus Query: 287 gatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgtgggcacggcgag 346 ||||||||| | ||||||||| ||||||| ||||||||||| |||||||||||||| Sbjct: 1750 gatctgtattgtgaagttgcattgcgcggtggtggggtcggtctcggtgggcacggcgag 1691
>ref|XM_506182.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0050F10.9 mRNA Length = 2205 Score = 48.1 bits (24), Expect = 0.019 Identities = 51/60 (85%) Strand = Plus / Minus Query: 287 gatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgtgggcacggcgag 346 ||||||||| | ||||||||| ||||||| ||||||||||| |||||||||||||| Sbjct: 1811 gatctgtattgtgaagttgcattgcgcggtggtggggtcggtctcggtgggcacggcgag 1752
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.019 Identities = 51/60 (85%) Strand = Plus / Minus Query: 287 gatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgtgggcacggcgag 346 ||||||||| | ||||||||| ||||||| ||||||||||| |||||||||||||| Sbjct: 3704014 gatctgtattgtgaagttgcattgcgcggtggtggggtcggtctcggtgggcacggcgag 3703955
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 225 gcgacggcgccgagcggcccggcg 248 |||||||||||||||||||||||| Sbjct: 4280964 gcgacggcgccgagcggcccggcg 4280941
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 225 gcgacggcgccgagcggcccggcg 248 |||||||||||||||||||||||| Sbjct: 126185 gcgacggcgccgagcggcccggcg 126162
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 48.1 bits (24), Expect = 0.019 Identities = 51/60 (85%) Strand = Plus / Minus Query: 287 gatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgtgggcacggcgag 346 ||||||||| | ||||||||| ||||||| ||||||||||| |||||||||||||| Sbjct: 48365 gatctgtattgtgaagttgcattgcgcggtggtggggtcggtctcggtgggcacggcgag 48306
>dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E02, full insert sequence Length = 1500 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 225 gcgacggcgccgagcggcccggcg 248 |||||||||||||||||||||||| Sbjct: 1032 gcgacggcgccgagcggcccggcg 1009
>dbj|AK105668.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H12, full insert sequence Length = 2008 Score = 48.1 bits (24), Expect = 0.019 Identities = 51/60 (85%) Strand = Plus / Minus Query: 287 gatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgtgggcacggcgag 346 ||||||||| | ||||||||| ||||||| ||||||||||| |||||||||||||| Sbjct: 1750 gatctgtattgtgaagttgcattgcgcggtggtggggtcggtctcggtgggcacggcgag 1691
>dbj|AK068262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149M23, full insert sequence Length = 2205 Score = 48.1 bits (24), Expect = 0.019 Identities = 51/60 (85%) Strand = Plus / Minus Query: 287 gatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgtgggcacggcgag 346 ||||||||| | ||||||||| ||||||| ||||||||||| |||||||||||||| Sbjct: 1811 gatctgtattgtgaagttgcattgcgcggtggtggggtcggtctcggtgggcacggcgag 1752
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 294 atggggaagttgcaggcggcgg 315 |||||||||||||||||||||| Sbjct: 781631 atggggaagttgcaggcggcgg 781610
>ref|XM_469078.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1753 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 cgatctgtatggggaagttgcaggcg 311 |||||||||||| ||||||||||||| Sbjct: 1415 cgatctgtatggtgaagttgcaggcg 1390
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 286 cgatctgtatggggaagttgcaggcg 311 |||||||||||| ||||||||||||| Sbjct: 103094 cgatctgtatggtgaagttgcaggcg 103119
>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster Length = 89976 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cgacggcgccgagcggcccggc 247 |||||||||||||||||||||| Sbjct: 76283 cgacggcgccgagcggcccggc 76262
>dbj|AK069506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N22, full insert sequence Length = 1811 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 286 cgatctgtatggggaagttgcaggcg 311 |||||||||||| ||||||||||||| Sbjct: 1462 cgatctgtatggtgaagttgcaggcg 1437
>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like protein, putative DNA-binding protein homolog, TATA-binding protein, hypothetical protein M3E9.200, 3-glucanase, K-exchanger-like protein, small heat shock-like protein, methionine synthase protein, putative far-red impaired response protein, and putative vegetative storage protein genes, complete cds Length = 100773 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 287 gatctgtatggggaagttgcaggcggcggtggaggggt 324 ||||||||||| ||||||||||||| | ||||| |||| Sbjct: 42703 gatctgtatggtgaagttgcaggcgtccgtggacgggt 42740
>ref|NM_001016000.2| Xenopus tropicalis hypothetical protein LOC548754 (LOC548754), mRNA Length = 1665 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 tcaagagctgggccagagcca 213 ||||||||||||||||||||| Sbjct: 1098 tcaagagctgggccagagcca 1078
>gb|DQ186869.1| Zea mays clone weo126 retrotransposon Bs1, partial sequence Length = 676 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 287 gatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgtgggca 339 ||||| ||||| ||||||||||| || | ||| |||||||||| |||||||| Sbjct: 352 gatctatatggtgaagttgcaggtgggcgcggaagggtcggtctccgtgggca 300
>gb|AC068542.5| Homo sapiens BAC clone RP11-288M20 from 2, complete sequence Length = 159776 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 127 aaaatatatgaggcaacaaatgatcaact 155 ||||||||||| ||| ||||||||||||| Sbjct: 157155 aaaatatatgaagcagcaaatgatcaact 157127
>emb|X16080.1|ZMBS1RET Maize transposable element Bs1 Length = 3203 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 287 gatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgtgggca 339 ||||| ||||| ||||||||||| || | ||| |||||||||| |||||||| Sbjct: 1175 gatctatatggtgaagttgcaggtgggcgcggaagggtcggtctccgtgggca 1123
>emb|CR848287.2| Xenopus tropicalis finished cDNA, clone TNeu067f07 Length = 1566 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 tcaagagctgggccagagcca 213 ||||||||||||||||||||| Sbjct: 999 tcaagagctgggccagagcca 979
>emb|CR848283.2| Xenopus tropicalis finished cDNA, clone TNeu097p06 Length = 1665 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 tcaagagctgggccagagcca 213 ||||||||||||||||||||| Sbjct: 1098 tcaagagctgggccagagcca 1078
>emb|CR848282.2| Xenopus tropicalis finished cDNA, clone TNeu081j17 Length = 1621 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 tcaagagctgggccagagcca 213 ||||||||||||||||||||| Sbjct: 1053 tcaagagctgggccagagcca 1033
>gb|M25397.1|MZETRNBS1 Zea mays transposon Bs1 Length = 3203 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 287 gatctgtatggggaagttgcaggcggcggtggaggggtcggtctgcgtgggca 339 ||||| ||||| ||||||||||| || | ||| |||||||||| |||||||| Sbjct: 1175 gatctatatggtgaagttgcaggtgggcgcggaagggtcggtctccgtgggca 1123
>gb|AY780784.1| Homo sapiens GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase gene, complete cds Length = 1133 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 cggcgccgagcggcccggcgcgcgtccg 256 |||||| |||||||||||||| |||||| Sbjct: 2801505 cggcgctgagcggcccggcgctcgtccg 2801478
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcgcgtccgccggcggccac 267 |||||||||||||||||||| Sbjct: 2260573 gcgcgtccgccggcggccac 2260592
>gb|AC125620.5| Rattus norvegicus 4 BAC CH230-9J2 (Children's Hospital Oakland Research Institute) complete sequence Length = 122542 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 atgccatctgaacatatatcctca 62 ||||||||||| |||||||||||| Sbjct: 119484 atgccatctgatcatatatcctca 119461
>ref|XM_414902.1| PREDICTED: Gallus gallus similar to multidrug resistance protein 1 (LOC416601), mRNA Length = 975 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 gcgccgagcggcccggcgcgcgtccgcc 258 |||||||||||||| |||| |||||||| Sbjct: 237 gcgccgagcggccccgcgcccgtccgcc 210
>ref|NM_001009121.1| Pan troglodytes fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group) (FUT1), mRNA Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY611628.1| Homo sapiens alpha(1,2)fucosyltransferase gene, complete cds Length = 1144 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>ref|NM_000148.2| Homo sapiens fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group) (FUT1), mRNA Length = 4244 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 1288 gagctgggccagagccagca 1269
>gb|DQ157279.1| Homo sapiens truncated alpha 1,2-fucosyltransferase (FUT1) gene, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|AF455028.1| Homo sapiens nonfunctional alpha(1,2)-fucosyltransferase (FUT1) gene, FUT1-H1 allele, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|BC074732.2| Homo sapiens fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group), mRNA (cDNA clone MGC:103804 IMAGE:30915185), complete cds Length = 1159 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 356 gagctgggccagagccagca 337
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcggcccggcgcgcgtccgc 257 |||||||||||||||||||| Sbjct: 1436857 gcggcccggcgcgcgtccgc 1436838
>emb|CR858009.1| Pongo pygmaeus mRNA; cDNA DKFZp468K087 (from clone DKFZp468K087) Length = 3320 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 386 gagctgggccagagccagca 367
>gb|DQ092446.1| Homo sapiens 2-alpha-L-fucosyltransferase (FUT1) gene, complete cds Length = 1167 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|AC009002.5| Homo sapiens chromosome 19 clone LLNLR-279G3, complete sequence Length = 37402 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 16961 gagctgggccagagccagca 16942
>gb|AY219650.1| Cacajao melanocephalus clone Cme alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219649.1| Pithecia irrorata clone Pir alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219648.1| Chiropotes satanas clone Cs2 alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219647.1| Chiropotes satanas clone Cs1 alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 868 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219645.1| Callicebus moloch clone Cmo alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|AY219644.1| Callicebus torquatus clone Cto alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219643.1| Callicebus brunneus clone Cbr alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219642.1| Brachyteles arachnoides clone Bar alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 999 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|AY219641.1| Ateles belzebuth clone Abm alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219640.1| Ateles paniscus clone Apa alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 876 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219639.1| Lagothrix lagotricha clone Lla alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219638.1| Saguinus bicolor clone Sbo alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 848 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 310 gagctgggccagagccagca 291
>gb|AY219637.1| Saguinus mystax clone Smy alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 846 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 308 gagctgggccagagccagca 289
>gb|AY219636.1| Saguinus fuscicollis clone Sf2 alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|AY219635.1| Saguinus fuscicollis clone Sf1 alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 841 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 308 gagctgggccagagccagca 289
>gb|AY219632.1| Leontopithecus chrysomelas clone Lch alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|AY219631.1| Callithrix jacchus clone Cja1 alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 854 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|AY219630.1| Callithrix emiliae clone Cem alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 848 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 307 gagctgggccagagccagca 288
>gb|AY219629.1| Callithrix humeralifera clone Chu alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|AY219628.1| Alouatta seniculus clone Ase alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 862 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219627.1| Alouatta belzebul clone Ab3 alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219626.1| Alouatta belzebul clone Ab2 alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 870 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219625.1| Alouatta belzebul clone Ab1 alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 865 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219624.1| Alouatta caraya clone Ac2 alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219623.1| Alouatta caraya clone Ac1 alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 861 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219622.1| Aotus azarai clone Aaz alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219621.1| Aotus nancymaae clone Ana alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219618.1| Saimiri boliviensis clone Sbb alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219617.1| Saimiri sciureus clone Ss3 alpha(1,2)fucosyltransferase (FUT1) gene, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AY219616.1| Saimiri sciureus clone Ss2 alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 1092 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 309 gagctgggccagagccagca 290
>emb|Z69587.1|HSFUT1MUT H.sapiens FUT1 gene Length = 1268 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 479 gagctgggccagagccagca 460
>emb|BX935097.2| Gallus gallus finished cDNA, clone ChEST70i22 Length = 925 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 231 gcgccgagcggcccggcgcgcgtccgcc 258 |||||||||||||| |||| |||||||| Sbjct: 186 gcgccgagcggccccgcgcccgtccgcc 159
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone BACR08I18, complete sequence Length = 160650 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 169 tctgttgcattccctaatgcgagatcaagagc 200 |||||||||||| ||||||||| |||||||| Sbjct: 92735 tctgttgcattcactaatgcgatttcaagagc 92704
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gcgacggcgccgagcggccc 244 |||||||||||||||||||| Sbjct: 12690896 gcgacggcgccgagcggccc 12690915
>ref|NM_022855.1| Rattus norvegicus casein kinase 1, gamma 3 (Csnk1g3), mRNA Length = 2547 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cggcccggcgcgcgtccgcc 258 |||||||||||||||||||| Sbjct: 490 cggcccggcgcgcgtccgcc 471
>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_B09 Length = 105247 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gcgacggcgccgagcggccc 244 |||||||||||||||||||| Sbjct: 87955 gcgacggcgccgagcggccc 87974
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gcgacggcgccgagcggccc 244 |||||||||||||||||||| Sbjct: 39173 gcgacggcgccgagcggccc 39192
>gb|AF112474.1|AF112474 Macaca fascicularis isolate J197 alpha (1,2) fucosyltransferase (FUT1) gene, complete cds Length = 1281 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 437 gagctgggccagagccagca 418
>gb|AF111936.1|AF111936 Callithrix jacchus isolate MJ50037 alpha (1,2) fucosyltransferase (FUT1) gene, partial cds Length = 1162 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 442 gagctgggccagagccagca 423
>gb|AF111935.1|AF111935 Pongo pygmaeus alpha (1,2) fucosyltransferase (FUT1) mRNA, partial cds Length = 1102 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 281 gagctgggccagagccagca 262
>gb|AF136647.1|AF136647 Saimiri sciureus alpha(1,2)fucosyltransferase (FUT1) gene, partial cds Length = 1196 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 476 gagctgggccagagccagca 457
>gb|AF045546.1|AF045546 Eulemur fulvus alpha(1,2)fucosyltransferase (FUTH) gene, complete cds Length = 1169 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>gb|AF045545.1|AF045545 Hylobates lar alpha(1,2)fucosyltransferase (FUTH) gene, complete cds Length = 1166 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|AF080607.1|AF080607 Macaca mulatta isolate PMC, alpha (1,2) fucosyl transferase (FUT1) gene, complete cds Length = 1322 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 471 gagctgggccagagccagca 452
>gb|AF080605.1|AF080605 Gorilla gorilla isolate Alexis, alpha (1,2) fucosyl transferase (FUT1) gene, complete cds Length = 1323 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 472 gagctgggccagagccagca 453
>gb|AF080603.1|AF080603 Pan troglodytes isolate CH16, alpha (1,2) fucosyl transferase (FUT1) gene, complete cds Length = 1312 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 461 gagctgggccagagccagca 442
>emb|AJ276886.1|HSA276886 Homo sapiens FUT1 gene for fucosyltransferase 1, allele S262K Length = 1194 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 411 gagctgggccagagccagca 392
>gb|DQ321370.1| Homo sapiens alpha (1,2) fucosyltransferase (FUT1) gene, FUT1-h allele, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 40.1 bits (20), Expect = 4.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 169 tctgttgcattccctaatgcgagatcaagagc 200 |||||||||||| ||||||||| |||||||| Sbjct: 125025 tctgttgcattcactaatgcgatttcaagagc 124994
>gb|AY923051.1| Homo sapiens fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase) (FUT1) gene, complete cds Length = 8549 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 3623 gagctgggccagagccagca 3604
>gb|U22321.1|RNU22321 Rattus norvegicus casein kinase 1 gamma 3 isoform mRNA, complete cds Length = 2547 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cggcccggcgcgcgtccgcc 258 |||||||||||||||||||| Sbjct: 490 cggcccggcgcgcgtccgcc 471
>dbj|AB004862.1| Homo sapiens h4 gene for alpha(1,2)fucosyltransferase, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>emb|AL671520.6| Mouse DNA sequence from clone RP23-99G21 on chromosome 4, complete sequence Length = 213303 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 201 tgggccagagccagcacgaacagagcga 228 |||||||||||||||| |||| |||||| Sbjct: 148054 tgggccagagccagcaggaactgagcga 148081
>gb|M35531.1|HUMHBLOD Human GDP-L-fucose:beta-D-galactoside 2-alpha-l-fucosyltransferase mRNA, complete cds Length = 3373 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 418 gagctgggccagagccagca 399
>dbj|D87932.1| Chlorocebus aethiops sabaeus gene for alpha(1,2)fucosyltransferase, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 318 gagctgggccagagccagca 299
>dbj|AB004863.1| Homo sapiens gene for alpha(1,2)fucosyltransferase, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>dbj|AB004861.1| Homo sapiens gene for alpha(1,2)fucosyltransferase, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>dbj|AB004860.1| Homo sapiens gene for alpha(1,2)fucosyltransferase, complete cds Length = 1097 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296
>dbj|AB004859.1| Homo sapiens gene for alpha(1,2)fucosyltransferase, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 gagctgggccagagccagca 216 |||||||||||||||||||| Sbjct: 315 gagctgggccagagccagca 296 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,235,742 Number of Sequences: 3902068 Number of extensions: 3235742 Number of successful extensions: 68369 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 67784 Number of HSP's gapped (non-prelim): 587 length of query: 349 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 327 effective length of database: 17,147,199,772 effective search space: 5607134325444 effective search space used: 5607134325444 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)