ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast74g09 |
|---|---|
| Clone Library Name | barley_pub |
>DHCA_MOUSE (P48758) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) Length = 276 Score = 38.5 bits (88), Expect = 0.004 Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = -2 Query: 319 NCVHPGFVKTEINWNTGVLSPEEGARGAVMLALAPGD--GPTGCYFDQTKMGEAW 161 N PG+V+T++ SPEEGA V LAL P D GP G F Q K E W Sbjct: 223 NACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHG-QFVQDKKVEPW 276
>DHCA_RAT (P47727) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) Length = 276 Score = 37.7 bits (86), Expect = 0.007 Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = -2 Query: 319 NCVHPGFVKTEINWNTGVLSPEEGARGAVMLALAP--GDGPTGCYFDQTKMGEAW 161 N PG+V+T++ SPEEGA V LAL P +GP G F Q K E W Sbjct: 223 NACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPGAEGPHG-QFVQDKKVEPW 276
>DHCA_RABIT (P47844) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) Length = 276 Score = 37.7 bits (86), Expect = 0.007 Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = -2 Query: 319 NCVHPGFVKTEINWNTGVLSPEEGARGAVMLALAPGD--GPTGCYFDQTKMGEAW 161 N PG+V+T++ SPEEGA V LAL P D GP G F K E W Sbjct: 223 NACCPGWVRTDMGGPNATKSPEEGAETPVYLALLPPDAEGPHG-QFVMDKKVEQW 276
>DHCA_PONPY (Q5RCU5) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) Length = 276 Score = 37.0 bits (84), Expect = 0.012 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -2 Query: 319 NCVHPGFVKTEINWNTGVLSPEEGARGAVMLALAPGD--GPTGCYFDQTKMGEAW 161 N PG+V+T++ SPEEGA V LAL P D GP G + + ++ E W Sbjct: 223 NACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRV-EQW 276
>DHCA_HUMAN (P16152) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydrogenase [NADP+]) (EC 1.1.1.197) Length = 276 Score = 37.0 bits (84), Expect = 0.012 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = -2 Query: 319 NCVHPGFVKTEINWNTGVLSPEEGARGAVMLALAPGD--GPTGCYFDQTKMGEAW 161 N PG+V+T++ SPEEGA V LAL P D GP G + + ++ E W Sbjct: 223 NACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRV-EQW 276
>DHCA_PIG (Q28960) Carbonyl reductase [NADPH] 1 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 1) (20-beta-hydroxysteroid dehydrogenase) (Prostaglandin-E(2) 9-reductase) (EC 1.1.1.189) (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin dehydroge Length = 288 Score = 34.7 bits (78), Expect = 0.062 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Frame = -2 Query: 319 NCVHPGFVKTEINWNTGVLSPEEGARGAVMLALAPGD--GPTGCYFDQTKMGE 167 N PG+V+T++ SPE GA V LAL P D GP G + K+ E Sbjct: 223 NACCPGWVRTDMGGPKAPKSPEVGAETPVYLALLPSDAEGPHGQFVTDKKVVE 275
>DHC3_HUMAN (O75828) Carbonyl reductase [NADPH] 3 (EC 1.1.1.184)| (NADPH-dependent carbonyl reductase 3) Length = 276 Score = 30.8 bits (68), Expect = 0.89 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -2 Query: 319 NCVHPGFVKTEINWNTGVLSPEEGARGAVMLALAPGD 209 N PG VKT+++ + + EEGA V LAL P D Sbjct: 223 NACCPGPVKTDMDGKDSIRTVEEGAETPVYLALLPPD 259
>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) (p135) Length = 1278 Score = 29.6 bits (65), Expect = 2.0 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 8/84 (9%) Frame = +3 Query: 81 ETSKLKV*SVEKCKPKQSGTGRVTFDHQASPIF-----VWSK*QPVGPSPGASASITAPL 245 +TSKL+ KPK++ T R T + P V +GPS ASA + Sbjct: 127 KTSKLR-----GLKPKKAPTARKTTTRRPKPTRPASTGVAGASSSLGPSGSASAGELSSS 181 Query: 246 APSSGERTPVFQLI---SVLTNPG 308 PS+ +TP+ I VLT+PG Sbjct: 182 EPSTPAQTPLAAPIIPTPVLTSPG 205
>ZYX_CHICK (Q04584) Zyxin| Length = 542 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +3 Query: 198 PVGPSPGASASITAPLAPSSGERTP 272 PV SPG+ T P+APS+ R P Sbjct: 230 PVASSPGSKPGATVPMAPSNSTRYP 254
>POP1_CAEEL (Q10666) Protein pop-1 (Posterior pharynx defect protein 1)| Length = 438 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +3 Query: 105 SVEKCKPK-QSGTGRVTFDHQASPIFVWSK*QPVGPSPGASASITAPLAPSSGERTPV 275 S E PK +G T QA+ + +G + GAS + +PLA SS R+P+ Sbjct: 342 SSESPSPKANAGIALTTQQQQAAMMHTMLMQMRLGSTTGASTHVPSPLASSSAGRSPL 399
>CRK_CHICK (Q04929) Proto-oncogene C-crk (P38)| Length = 305 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Frame = +3 Query: 108 VEKCKPKQSGTGRVTFDHQASPIFVWSK*QPVG---PSPGASASITAPL 245 VEKC+P + +T +Q S S QP+G P P A SI PL Sbjct: 188 VEKCRPSSASVSTLTGGNQDS-----SHPQPLGGPEPGPYAQPSINTPL 231
>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) Length = 1281 Score = 28.1 bits (61), Expect = 5.8 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Frame = +3 Query: 81 ETSKLKV*SVEKCKPKQSGTGRVTFDHQASPIF-----VWSK*QPVGPSPGASASITAPL 245 +TSKL+ KPK++ T R T + P V +GPS ASA + Sbjct: 127 KTSKLR-----GLKPKKAPTARKTTTRRPKPTRPASTGVAGPSSSLGPSGSASAGELSSS 181 Query: 246 APSSGERTPVFQLI---SVLTNPG 308 PS+ +TP+ I LT+PG Sbjct: 182 EPSTPAQTPLAAPIIPTPALTSPG 205
>THD1_MYCLE (Q9X7F1) Probable threonine dehydratase biosynthetic (EC 4.3.1.19)| (Threonine deaminase) Length = 427 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/38 (44%), Positives = 19/38 (50%) Frame = -2 Query: 277 NTGVLSPEEGARGAVMLALAPGDGPTGCYFDQTKMGEA 164 NT VL E A+M ALA G+ T Y DQ G A Sbjct: 211 NTAVLGVEPAGAAAMMAALAAGEPVTLDYVDQFVDGAA 248
>KCNA5_MUSPF (P79197) Potassium voltage-gated channel subfamily A member 5| (Voltage-gated potassium channel subunit Kv1.5) Length = 601 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +3 Query: 195 QPVGPSPGASASITAPLAPSSG 260 QP+GPS GA+ S PLAP SG Sbjct: 279 QPLGPSRGANGS--GPLAPPSG 298
>DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) Length = 1280 Score = 28.1 bits (61), Expect = 5.8 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 8/84 (9%) Frame = +3 Query: 81 ETSKLKV*SVEKCKPKQSGTGRVTFDHQASPIF-----VWSK*QPVGPSPGASASITAPL 245 +TSKL+ KPK++ T R T + P V +GPS ASA + Sbjct: 127 KTSKLR-----GLKPKKAPTARKTTTRRPKPTRPASTGVAGPSSSLGPSGSASAGELSSS 181 Query: 246 APSSGERTPVFQLI---SVLTNPG 308 PS+ +TP+ I LT+PG Sbjct: 182 EPSTPAQTPLAAPIIPTPALTSPG 205
>NUMBL_MOUSE (O08919) Numb-like protein| Length = 604 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -3 Query: 216 PATGPPAATSTRRRWGRP 163 PA+GPP AT+ WG P Sbjct: 377 PASGPPPATTGTSAWGEP 394
>K1543_MOUSE (Q80VC9) Protein KIAA1543| Length = 1252 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 171 PIFVWSK*QPVGPSPGASASITAPLAPSSGERTPVFQLISVLTNPGCTQ 317 P FV +K P G + + T P +SG +PVF L +PG Q Sbjct: 319 PDFVQAKDLPDGHAVSPRNTETVPSQNNSGSSSPVFNFRHPLLSPGGPQ 367
>TRI16_HUMAN (O95361) Tripartite motif protein 16 (Estrogen-responsive B box| protein) Length = 564 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +3 Query: 204 GPSPGASASITAPLAPSSGERTP 272 GP P A+A APL+P SG +P Sbjct: 10 GPLPRATAQPPAPLSPDSGSPSP 32
>MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor| (Mu-protocadherin) (GP100) Length = 862 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 195 QPVGPSPGASASITAPLAPSSGERTP 272 QP+ P+PGAS S + P PS +TP Sbjct: 616 QPMVPTPGASTS-SQPATPSGSTQTP 640
>7UP2_DROME (P16376) Steroid receptor seven-up, isoform A| Length = 746 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +3 Query: 207 PSPGASASITAPLAPSSG 260 P+ ASAS++APL PS+G Sbjct: 536 PTSSASASVSAPLVPSAG 553
>ZN502_HUMAN (Q8TBZ5) Zinc finger protein 502| Length = 544 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/64 (26%), Positives = 32/64 (50%) Frame = +3 Query: 111 EKCKPKQSGTGRVTFDHQASPIFVWSK*QPVGPSPGASASITAPLAPSSGERTPVFQLIS 290 E C ++ G GR+TF H+ +P + S+ S ++S+ L S+ E ++ + Sbjct: 74 ESCLFQEGGFGRITFIHKEAPPEIISQGYNFEKSLLLTSSLVTRLRVSTEESLHQWETSN 133 Query: 291 VLTN 302 + TN Sbjct: 134 IQTN 137
>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)| (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51) Length = 711 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = -2 Query: 262 SPEEGARGAVMLALAPGDGPTGC-YFDQTKMGEAW 161 S + G G +L + G GPTGC + + K+G+ W Sbjct: 173 SGDPGGLGDWLLEVEFGQGPTGCSHVESFKVGKNW 207 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,272,762 Number of Sequences: 219361 Number of extensions: 850058 Number of successful extensions: 2559 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2471 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2559 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
