ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast74g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474449.1| Oryza sativa (japonica cultivar-group), predic... 76 7e-11
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 76 7e-11
3dbj|AK067667.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 7e-11
4tpe|BN000591.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 76 7e-11
5emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 76 7e-11
6ref|XM_474448.1| Oryza sativa (japonica cultivar-group), predic... 70 5e-09
7emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207... 70 5e-09
8dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
9dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
10tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 70 5e-09
11emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 70 5e-09
12ref|XM_482738.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-06
13ref|XM_474454.1| Oryza sativa (japonica cultivar-group), predic... 60 4e-06
14ref|XM_474450.1| Oryza sativa (japonica cultivar-group), predic... 60 4e-06
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
16dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
17dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
18dbj|AK070680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 4e-06
19tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 60 4e-06
20tpe|BN000592.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 60 4e-06
21ref|XM_474445.1| Oryza sativa (japonica cultivar-group), predic... 54 3e-04
22dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
23dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
24tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 54 3e-04
25dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
26dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
27emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete ... 46 0.065
28ref|XM_754706.1| Ustilago maydis 521 hypothetical protein (UM036... 44 0.26
29gb|AE012280.1| Xanthomonas campestris pv. campestris str. ATCC 3... 44 0.26
30gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 44 0.26
31emb|AL606611.3|OSJN00044 Oryza sativa genomic DNA, chromosome 4,... 42 1.0
32gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the... 42 1.0
33emb|AJ438168.1|HSA438168 Halobacterium salinarum basB gene for a... 42 1.0
34ref|XM_549978.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.0
35gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 4.0
36ref|XM_544971.2| PREDICTED: Canis familiaris similar to dentin s... 40 4.0
37emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowm... 40 4.0
38emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative ... 40 4.0
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
40gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.0
41dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
42dbj|AK104367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.0
43dbj|AK104110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.0
44dbj|AK067257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.0
45dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA f... 40 4.0
46gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 4.0
47gb|U87832.1|OBU87832 Oat blue dwarf virus complete genome 40 4.0
48gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibit... 40 4.0
49gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, comple... 40 4.0
50dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0 
>ref|XM_474449.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1059

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                     
Query: 261 gaagcagttgcggcggatctcgccgacgttcccgccgggcct 302
           ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 969 gaagcagctgcggcggatctcgccgacgttcccgccgggcct 928
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                          
Query: 261      gaagcagttgcggcggatctcgccgacgttcccgccgggcct 302
                ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 35250654 gaagcagctgcggcggatctcgccgacgttcccgccgggcct 35250695



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                               
Query: 260      tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 306
                |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 35242527 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 35242573



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 259      ctgaagcagttgcggcggatctcgccgacgttcc 292
                ||||||||| ||||||||||||||||||||||||
Sbjct: 35280772 ctgaagcagctgcggcggatctcgccgacgttcc 35280805



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 259      ctgaagcagttgcggcggatctcgccgacgttcc 292
                ||||||||| ||||||||||||||||||||||||
Sbjct: 35258058 ctgaagcagctgcggcggatctcgccgacgttcc 35258091



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 267      gttgcggcggatctcgccgacgttccc 293
                |||||||||||||||||||||||||||
Sbjct: 35227653 gttgcggcggatctcgccgacgttccc 35227679



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 211     tcctcgccggcctcgacgacg 231
               |||||||||||||||||||||
Sbjct: 9331947 tcctcgccggcctcgacgacg 9331967
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>dbj|AK067667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118D03, full
            insert sequence
          Length = 1385

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                      
Query: 261  gaagcagttgcggcggatctcgccgacgttcccgccgggcct 302
            ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1100 gaagcagctgcggcggatctcgccgacgttcccgccgggcct 1059
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>tpe|BN000591.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx62 gene for
            class III peroxidase 62 precursor, exons 1-2
          Length = 1186

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                      
Query: 261  gaagcagttgcggcggatctcgccgacgttcccgccgggcct 302
            ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1096 gaagcagctgcggcggatctcgccgacgttcccgccgggcct 1055
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>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
             complete sequence
          Length = 173770

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                       
Query: 261   gaagcagttgcggcggatctcgccgacgttcccgccgggcct 302
             ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 46499 gaagcagctgcggcggatctcgccgacgttcccgccgggcct 46540



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 260   tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 306
             |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 38372 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 38418



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 259   ctgaagcagttgcggcggatctcgccgacgttcc 292
             ||||||||| ||||||||||||||||||||||||
Sbjct: 76617 ctgaagcagctgcggcggatctcgccgacgttcc 76650



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 259   ctgaagcagttgcggcggatctcgccgacgttcc 292
             ||||||||| ||||||||||||||||||||||||
Sbjct: 53903 ctgaagcagctgcggcggatctcgccgacgttcc 53936



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 267   gttgcggcggatctcgccgacgttccc 293
             |||||||||||||||||||||||||||
Sbjct: 23498 gttgcggcggatctcgccgacgttccc 23524
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>ref|XM_474448.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                          
Query: 260 tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 306
           |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 964 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 918
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>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome
          Length = 124321

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                            
Query: 260   tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 306
             |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 82573 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 82527



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 259   ctgaagcagttgcggcggatctcgccgacgttcc 292
             ||||||||| ||||||||||||||||||||||||
Sbjct: 75769 ctgaagcagctgcggcggatctcgccgacgttcc 75736



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 259   ctgaagcagttgcggcggatctcgccgacgttcc 292
             ||||||||| ||||||||||||||||||||||||
Sbjct: 72462 ctgaagcagctgcggcggatctcgccgacgttcc 72429



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 267   gttgcggcggatctcgccgacgttccc 293
             |||||||||||||||||||||||||||
Sbjct: 85819 gttgcggcggatctcgccgacgttccc 85793
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>dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B06, full
            insert sequence
          Length = 1299

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 260  tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 306
            |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 1053 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 1007
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>dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L22, full
            insert sequence
          Length = 1333

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 260  tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 306
            |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 1054 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 1008
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>tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx61 gene for
            class III peroxidase 61, exons 1-2
          Length = 1178

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 260  tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 306
            |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 1119 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 1073
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>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete
             sequence
          Length = 82895

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 260   tgaagcagttgcggcggatctcgccgacgttcccgccgggcctcggc 306
             |||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 74474 tgaagcagttgcggcggatctcgcctttgttcccgccgggcctcggc 74520



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 259   ctgaagcagttgcggcggatctcgccgacgttcc 292
             ||||||||| ||||||||||||||||||||||||
Sbjct: 81278 ctgaagcagctgcggcggatctcgccgacgttcc 81311



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 267   gttgcggcggatctcgccgacgttccc 293
             |||||||||||||||||||||||||||
Sbjct: 71228 gttgcggcggatctcgccgacgttccc 71254
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>ref|XM_482738.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 546

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 277 atctcgccgacgttcccgccgggcctcggc 306
           ||||||||||||||||||||||||||||||
Sbjct: 231 atctcgccgacgttcccgccgggcctcggc 202
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>ref|XM_474454.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1017

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 259 ctgaagcagttgcggcggatctcgccgacgttcc 292
           ||||||||| ||||||||||||||||||||||||
Sbjct: 950 ctgaagcagctgcggcggatctcgccgacgttcc 917
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>ref|XM_474450.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 259 ctgaagcagttgcggcggatctcgccgacgttcc 292
           ||||||||| ||||||||||||||||||||||||
Sbjct: 950 ctgaagcagctgcggcggatctcgccgacgttcc 917
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                              
Query: 277      atctcgccgacgttcccgccgggcctcggc 306
                ||||||||||||||||||||||||||||||
Sbjct: 22269513 atctcgccgacgttcccgccgggcctcggc 22269484
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>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0048G02
          Length = 155542

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                           
Query: 277   atctcgccgacgttcccgccgggcctcggc 306
             ||||||||||||||||||||||||||||||
Sbjct: 85889 atctcgccgacgttcccgccgggcctcggc 85860
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>dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A01, full
            insert sequence
          Length = 1240

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 259  ctgaagcagttgcggcggatctcgccgacgttcc 292
            ||||||||| ||||||||||||||||||||||||
Sbjct: 1016 ctgaagcagctgcggcggatctcgccgacgttcc 983
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>dbj|AK070680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060N16, full
           insert sequence
          Length = 2256

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 259 ctgaagcagttgcggcggatctcgccgacgttcc 292
           ||||||||| ||||||||||||||||||||||||
Sbjct: 975 ctgaagcagctgcggcggatctcgccgacgttcc 942
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>tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx64 gene for
            class III peroxidase 64 precursor, exons 1-2
          Length = 1091

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 259  ctgaagcagttgcggcggatctcgccgacgttcc 292
            ||||||||| ||||||||||||||||||||||||
Sbjct: 1024 ctgaagcagctgcggcggatctcgccgacgttcc 991
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>tpe|BN000592.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx63 gene for
            class III peroxidase 63 precursor, exons 1-2
          Length = 1098

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 259  ctgaagcagttgcggcggatctcgccgacgttcc 292
            ||||||||| ||||||||||||||||||||||||
Sbjct: 1040 ctgaagcagctgcggcggatctcgccgacgttcc 1007
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>ref|XM_474445.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1047

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 267 gttgcggcggatctcgccgacgttccc 293
           |||||||||||||||||||||||||||
Sbjct: 975 gttgcggcggatctcgccgacgttccc 949
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>dbj|AK103558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132H20, full
            insert sequence
          Length = 1413

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 267  gttgcggcggatctcgccgacgttccc 293
            |||||||||||||||||||||||||||
Sbjct: 1078 gttgcggcggatctcgccgacgttccc 1052
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>dbj|AK101245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032B08, full
            insert sequence
          Length = 3800

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 267  gttgcggcggatctcgccgacgttccc 293
            |||||||||||||||||||||||||||
Sbjct: 3566 gttgcggcggatctcgccgacgttccc 3540
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>tpe|BN000589.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx60 gene for
            class III peroxidase 60 precursor, exons 1-3
          Length = 1221

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 267  gttgcggcggatctcgccgacgttccc 293
            |||||||||||||||||||||||||||
Sbjct: 1149 gttgcggcggatctcgccgacgttccc 1123
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 277     atctcgccgacgttcccgccgggcctcggc 306
               |||||||||||||||| |||||||||||||
Sbjct: 8721819 atctcgccgacgttcctgccgggcctcggc 8721848
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>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0057D11
          Length = 190790

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 277    atctcgccgacgttcccgccgggcctcggc 306
              |||||||||||||||| |||||||||||||
Sbjct: 151615 atctcgccgacgttcctgccgggcctcggc 151644
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>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29
          Length = 283100

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 243   gcgcagggcgttggggctgaagc 265
             |||||||||||||||||||||||
Sbjct: 20456 gcgcagggcgttggggctgaagc 20478
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>ref|XM_754706.1| Ustilago maydis 521 hypothetical protein (UM03652.1) partial mRNA
          Length = 1404

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 222 ctcgacgacggtgtcgatggcg 243
           ||||||||||||||||||||||
Sbjct: 174 ctcgacgacggtgtcgatggcg 195
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>gb|AE012280.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 188
            of 460 of the complete genome
          Length = 10801

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 230  cggtgtcgatggcgcgcagggc 251
            ||||||||||||||||||||||
Sbjct: 9466 cggtgtcgatggcgcgcagggc 9487
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 230     cggtgtcgatggcgcgcagggc 251
               ||||||||||||||||||||||
Sbjct: 2961888 cggtgtcgatggcgcgcagggc 2961867
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>emb|AL606611.3|OSJN00044 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0043H09,
             complete sequence
          Length = 88824

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 211   tcctcgccggcctcgacgacg 231
             |||||||||||||||||||||
Sbjct: 15318 tcctcgccggcctcgacgacg 15338
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>gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the complete genome
          Length = 11548

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 222  ctcgacgacggtgtcgatggcgcgc 246
            ||||||| |||||||||||||||||
Sbjct: 1337 ctcgacggcggtgtcgatggcgcgc 1361
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>emb|AJ438168.1|HSA438168 Halobacterium salinarum basB gene for amino acid binding protein
          Length = 1242

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 222 ctcgacgacggtgtcgatggcgcgc 246
           ||||||| |||||||||||||||||
Sbjct: 192 ctcgacggcggtgtcgatggcgcgc 168
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>ref|XM_549978.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 206 cttcctcctcgccggcctcg 225
           ||||||||||||||||||||
Sbjct: 65  cttcctcctcgccggcctcg 84
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    acacgcacacacgcgagcag 127
              ||||||||||||||||||||
Sbjct: 469966 acacgcacacacgcgagcag 469947
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>ref|XM_544971.2| PREDICTED: Canis familiaris similar to dentin sialophosphoprotein
            preproprotein (LOC487849), mRNA
          Length = 4290

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   tgagcaagcaagcactcagg 61
            ||||||||||||||||||||
Sbjct: 3471 tgagcaagcaagcactcagg 3490
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>emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowman Birk trypsin inhibitor
          Length = 4624

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  cttcctcctcgccggcctcg 225
            ||||||||||||||||||||
Sbjct: 2721 cttcctcctcgccggcctcg 2740
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>emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative Bowman Birk trypsin inhibitor
          Length = 17385

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 206  cttcctcctcgccggcctcg 225
            ||||||||||||||||||||
Sbjct: 3570 cttcctcctcgccggcctcg 3589
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 206     cttcctcctcgccggcctcg 225
               ||||||||||||||||||||
Sbjct: 1353708 cttcctcctcgccggcctcg 1353689



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 206     cttcctcctcgccggcctcg 225
               ||||||||||||||||||||
Sbjct: 1347659 cttcctcctcgccggcctcg 1347640
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 213     ctcgccggcctcgacgacgg 232
               ||||||||||||||||||||
Sbjct: 4380189 ctcgccggcctcgacgacgg 4380170
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>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0037C04
          Length = 137879

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   cttcctcctcgccggcctcg 225
             ||||||||||||||||||||
Sbjct: 51759 cttcctcctcgccggcctcg 51740



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   cttcctcctcgccggcctcg 225
             ||||||||||||||||||||
Sbjct: 45710 cttcctcctcgccggcctcg 45691
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>dbj|AK104367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D09, full
           insert sequence
          Length = 1059

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 206 cttcctcctcgccggcctcg 225
           ||||||||||||||||||||
Sbjct: 65  cttcctcctcgccggcctcg 84
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>dbj|AK104110.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G03, full
           insert sequence
          Length = 1047

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 206 cttcctcctcgccggcctcg 225
           ||||||||||||||||||||
Sbjct: 65  cttcctcctcgccggcctcg 84
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>dbj|AK067257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096H09, full
           insert sequence
          Length = 1072

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 206 cttcctcctcgccggcctcg 225
           ||||||||||||||||||||
Sbjct: 63  cttcctcctcgccggcctcg 82
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>dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA for trypsin
           inhibitor, complete cds
          Length = 1061

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 206 cttcctcctcgccggcctcg 225
           ||||||||||||||||||||
Sbjct: 44  cttcctcctcgccggcctcg 63
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 270     gcggcggatctcgccgacgt 289
               ||||||||||||||||||||
Sbjct: 2397794 gcggcggatctcgccgacgt 2397813
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>gb|U87832.1|OBU87832 Oat blue dwarf virus complete genome
          Length = 6509

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 205  ccttcctcctcgccggcctc 224
            ||||||||||||||||||||
Sbjct: 1277 ccttcctcctcgccggcctc 1296
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>gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibitor mRNA, complete cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 206 cttcctcctcgccggcctcg 225
           ||||||||||||||||||||
Sbjct: 21  cttcctcctcgccggcctcg 40
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>gb|AF319782.2| Callitrichine herpesvirus 3 strain CJ0149, complete genome
          Length = 149696

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 195   agccgtgaatccttcctcctcgccggcc 222
             |||| ||||||||||||||||| |||||
Sbjct: 83746 agccttgaatccttcctcctcgacggcc 83773
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>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0044F08
          Length = 141528

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 206  cttcctcctcgccggcctcg 225
            ||||||||||||||||||||
Sbjct: 3329 cttcctcctcgccggcctcg 3310


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,403,343
Number of Sequences: 3902068
Number of extensions: 2403343
Number of successful extensions: 53993
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53510
Number of HSP's gapped (non-prelim): 483
length of query: 307
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 285
effective length of database: 17,147,199,772
effective search space: 4886951935020
effective search space used: 4886951935020
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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