ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast74f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009259.1| Triticum aestivum clone wlk4.pk0015.a10:fis, full... 309 3e-81
2emb|AJ440794.1|TAE440794 Triticum aestivum mRNA for glutathione ... 305 4e-80
3ref|NM_190039.1| Oryza sativa (japonica cultivar-group), predic... 90 5e-15
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
5dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic D... 90 5e-15
6dbj|AK103927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 5e-15
7dbj|AK059985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 5e-15
8gb|BT009137.1| Triticum aestivum clone wl1n.pk0040.b1:fis, full ... 86 7e-14
9emb|AJ010296.1|ZMA010296 Zea mays mRNA for glutathione transfera... 86 7e-14
10gb|AY105647.1| Zea mays PCO132886 mRNA sequence 86 7e-14
11gb|AF309383.1| Oryza sativa (japonica cultivar-group) clone S102... 82 1e-12
12emb|AJ010295.1|ZMA010295 Zea mays mRNA for glutathione transfera... 78 2e-11
13emb|X06755.1|ZMGST3 Maize mRNA for GSH gluthathione S-transferas... 58 2e-05
14emb|X04455.1|ZMGGST3B Maize mRNA for glutathione-S-transferase G... 44 0.24
15emb|X04375.1|ZMGST3A Maize mRNA for glutathione-S-transferase GS... 44 0.24
16gb|U59552.1|HGU59552 Hepatitis GB virus C, isolate 36, 5'-untran... 42 0.95
17gb|U59551.1|HGU59551 Hepatitis GB virus C, isolate 35, 5'-untran... 42 0.95
18gb|U59550.1|HGU59550 Hepatitis GB virus C, isolate 34, 5'-untran... 42 0.95
19gb|U59549.1|HGU59549 Hepatitis GB virus C, isolate 33, 5'-untran... 42 0.95
20gb|U59548.1|HGU59548 Hepatitis GB virus C, isolate 32, 5'-untran... 42 0.95
21gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 3.8
22gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, com... 40 3.8
23gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 3.8
24ref|XM_957202.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.8
25ref|XM_328414.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.8
26gb|AC107801.14| Mus musculus, clone RP23-29M6, complete sequence 40 3.8
27ref|XM_780527.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 3.8
28gb|BT009600.1| Triticum aestivum clone wre1n.pk0078.d7:fis, full... 40 3.8
29ref|XM_779903.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 3.8
30dbj|AB015870.1| Vitis vinifera gene for phenylalanine ammonia-ly... 40 3.8
31emb|AL845417.3| Mouse DNA sequence from clone RP23-20I9 on chrom... 40 3.8 
>gb|BT009259.1| Triticum aestivum clone wlk4.pk0015.a10:fis, full insert mRNA
           sequence
          Length = 788

 Score =  309 bits (156), Expect = 3e-81
 Identities = 168/172 (97%)
 Strand = Plus / Minus

                                                                       
Query: 116 acctcagacgccgggcgggagggggatggaggcgacggtcttggcccaggcggggcgggc 175
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 acctcagacggcgggcgggagggggatggaggcgacggtcttggcccaggcggggcgggc 648

                                                                       
Query: 176 ggagatctcgtcccaccaagccttgacgtgggggcgggaggccaccaggtccgccttggg 235
           ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 647 ggagatctcctcccaccaggccttgacgtgcgggcgggaggccaccaggtccgccttggg 588

                                                               
Query: 236 gctcttggtgagcatgaagaggtaggacatgtggttggcgtcggcgagcgtg 287
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gctcttggtgagcatgaagaggtaggacatgtggttggcgtcggcgagcgtg 536



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 55/64 (85%), Gaps = 3/64 (4%)
 Strand = Plus / Minus

                                                                       
Query: 34  ttttctaaaaagtcgtttgttccatca---caattttattccattctcgccgcagctaaa 90
           |||| |||||||| |||| ||||||||   | |||||||||| ||||||||||||| |||
Sbjct: 773 ttttttaaaaagttgtttattccatcatcgcgattttattccgttctcgccgcagccaaa 714

               
Query: 91  caag 94
           ||||
Sbjct: 713 caag 710
to top
>emb|AJ440794.1|TAE440794 Triticum aestivum mRNA for glutathione transferase F5 (gstf5 gene)
          Length = 866

 Score =  305 bits (154), Expect = 4e-80
 Identities = 166/170 (97%)
 Strand = Plus / Minus

                                                                       
Query: 116 acctcagacgccgggcgggagggggatggaggcgacggtcttggcccaggcggggcgggc 175
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 acctcagacggcgggcgggagggggatggaggcgacggtcttggcccaggcggggcgggc 630

                                                                       
Query: 176 ggagatctcgtcccaccaagccttgacgtgggggcgggaggccaccaggtccgccttggg 235
           ||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 629 ggagatctcctcccaccaggccttgacgtgcgggcgggaggccaccaggtccgccttggg 570

                                                             
Query: 236 gctcttggtgagcatgaagaggtaggacatgtggttggcgtcggcgagcg 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gctcttggtgagcatgaagaggtaggacatgtggttggcgtcggcgagcg 520



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 73/86 (84%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                       
Query: 12  aacaccaagaattcgaagctcattttctaaaaagtcgtttgttccatca---caatttta 68
           |||||||||||||| |||||   | |||||||||| |||| ||||||||   | ||||||
Sbjct: 777 aacaccaagaattccaagcttcctctctaaaaagttgtttattccatcatcgcgatttta 718

                                     
Query: 69  ttccattctcgccgcagctaaacaag 94
           |||| ||||||||||||| |||||||
Sbjct: 717 ttccgttctcgccgcagccaaacaag 692
to top
>ref|NM_190039.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 666

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                       
Query: 129 ggcgggagggggatggaggcgacggtcttggcccaggcggggcgggcggagatctcgtcc 188
           ||||||| |||||||| |||| |||||||   ||| || ||||| | |||||| ||||||
Sbjct: 656 ggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcgtcc 597

                                                                       
Query: 189 caccaagccttgacgtgggggcgggaggccaccaggtccgccttggggctcttggtgagc 248
           ||||| ||||||||||| || | ||| || || || |||||| ||||  |||||| ||| 
Sbjct: 596 caccacgccttgacgtgcggcctggacgcgacgagctccgccatgggcgtcttggagagg 537

                                                
Query: 249 atgaagaggtaggacatgtggttggcgtcggcgagcg 285
           |  |  |||||||||||||||||||||||||||||||
Sbjct: 536 aacagcaggtaggacatgtggttggcgtcggcgagcg 500
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 129/157 (82%)
 Strand = Plus / Plus

                                                                            
Query: 129      ggcgggagggggatggaggcgacggtcttggcccaggcggggcgggcggagatctcgtcc 188
                ||||||| |||||||| |||| |||||||   ||| || ||||| | |||||| ||||||
Sbjct: 40955232 ggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcgtcc 40955291

                                                                            
Query: 189      caccaagccttgacgtgggggcgggaggccaccaggtccgccttggggctcttggtgagc 248
                ||||| ||||||||||| || | ||| || || || |||||| ||||  |||||| ||| 
Sbjct: 40955292 caccacgccttgacgtgcggcctggacgcgacgagctccgccatgggcgtcttggagagg 40955351

                                                     
Query: 249      atgaagaggtaggacatgtggttggcgtcggcgagcg 285
                |  |  |||||||||||||||||||||||||||||||
Sbjct: 40955352 aacagcaggtaggacatgtggttggcgtcggcgagcg 40955388
to top
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0423A12
          Length = 178649

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 129/157 (82%)
 Strand = Plus / Plus

                                                                         
Query: 129   ggcgggagggggatggaggcgacggtcttggcccaggcggggcgggcggagatctcgtcc 188
             ||||||| |||||||| |||| |||||||   ||| || ||||| | |||||| ||||||
Sbjct: 83657 ggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcgtcc 83716

                                                                         
Query: 189   caccaagccttgacgtgggggcgggaggccaccaggtccgccttggggctcttggtgagc 248
             ||||| ||||||||||| || | ||| || || || |||||| ||||  |||||| ||| 
Sbjct: 83717 caccacgccttgacgtgcggcctggacgcgacgagctccgccatgggcgtcttggagagg 83776

                                                  
Query: 249   atgaagaggtaggacatgtggttggcgtcggcgagcg 285
             |  |  |||||||||||||||||||||||||||||||
Sbjct: 83777 aacagcaggtaggacatgtggttggcgtcggcgagcg 83813
to top
>dbj|AK103927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D04, full
           insert sequence
          Length = 871

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                       
Query: 129 ggcgggagggggatggaggcgacggtcttggcccaggcggggcgggcggagatctcgtcc 188
           ||||||| |||||||| |||| |||||||   ||| || ||||| | |||||| ||||||
Sbjct: 737 ggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcgtcc 678

                                                                       
Query: 189 caccaagccttgacgtgggggcgggaggccaccaggtccgccttggggctcttggtgagc 248
           ||||| ||||||||||| || | ||| || || || |||||| ||||  |||||| ||| 
Sbjct: 677 caccacgccttgacgtgcggcctggacgcgacgagctccgccatgggcgtcttggagagg 618

                                                
Query: 249 atgaagaggtaggacatgtggttggcgtcggcgagcg 285
           |  |  |||||||||||||||||||||||||||||||
Sbjct: 617 aacagcaggtaggacatgtggttggcgtcggcgagcg 581
to top
>dbj|AK059985.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G06, full
           insert sequence
          Length = 963

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 129/157 (82%)
 Strand = Plus / Minus

                                                                       
Query: 129 ggcgggagggggatggaggcgacggtcttggcccaggcggggcgggcggagatctcgtcc 188
           ||||||| |||||||| |||| |||||||   ||| || ||||| | |||||| ||||||
Sbjct: 812 ggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcgtcc 753

                                                                       
Query: 189 caccaagccttgacgtgggggcgggaggccaccaggtccgccttggggctcttggtgagc 248
           ||||| ||||||||||| || | ||| || || || |||||| ||||  |||||| ||| 
Sbjct: 752 caccacgccttgacgtgcggcctggacgcgacgagctccgccatgggcgtcttggagagg 693

                                                
Query: 249 atgaagaggtaggacatgtggttggcgtcggcgagcg 285
           |  |  |||||||||||||||||||||||||||||||
Sbjct: 692 aacagcaggtaggacatgtggttggcgtcggcgagcg 656
to top
>gb|BT009137.1| Triticum aestivum clone wl1n.pk0040.b1:fis, full insert mRNA
           sequence
          Length = 920

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                       
Query: 165 gcggggcgggcggagatctcgtcccaccaagccttgacgtgggggcgggaggccaccagg 224
           ||||||||||||| |||  | |||||||| ||||||||||||||||||| ||| || || 
Sbjct: 669 gcggggcgggcggcgatggcctcccaccaggccttgacgtgggggcgggcggcgacgagc 610

                                                                       
Query: 225 tccgccttggggctcttggtgagcatgaagaggtaggacatgtggttggcgtcggcgagc 284
            | ||||||||| ||||| ||||   ||  |||||||||  |||||||||||||||||||
Sbjct: 609 ccggccttgggggtcttgctgaggtagagcaggtaggacgcgtggttggcgtcggcgagc 550

              
Query: 285 gtg 287
           |||
Sbjct: 549 gtg 547
to top
>emb|AJ010296.1|ZMA010296 Zea mays mRNA for glutathione transferase III(b)
          Length = 944

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                       
Query: 165 gcggggcgggcggagatctcgtcccaccaagccttgacgtgggggcgggaggccaccagg 224
           ||||||||||||| |||  | |||||||| ||||||||||||||||||| ||| || || 
Sbjct: 673 gcggggcgggcggcgatggcctcccaccaggccttgacgtgggggcgggcggcgacgagc 614

                                                                       
Query: 225 tccgccttggggctcttggtgagcatgaagaggtaggacatgtggttggcgtcggcgagc 284
            | ||||||||| ||||| ||||   ||  |||||||||  |||||||||||||||||||
Sbjct: 613 ccggccttgggggtcttgctgaggtagagcaggtaggacgcgtggttggcgtcggcgagc 554

              
Query: 285 gtg 287
           |||
Sbjct: 553 gtg 551
to top
>gb|AY105647.1| Zea mays PCO132886 mRNA sequence
          Length = 1003

 Score = 85.7 bits (43), Expect = 7e-14
 Identities = 103/123 (83%)
 Strand = Plus / Minus

                                                                       
Query: 165 gcggggcgggcggagatctcgtcccaccaagccttgacgtgggggcgggaggccaccagg 224
           ||||||||||||| |||  | |||||||| ||||||||||||||||||| ||| || || 
Sbjct: 752 gcggggcgggcggcgatggcctcccaccaggccttgacgtgggggcgggcggcgacgagc 693

                                                                       
Query: 225 tccgccttggggctcttggtgagcatgaagaggtaggacatgtggttggcgtcggcgagc 284
            | ||||||||| ||||| ||||   ||  |||||||||  |||||||||||||||||||
Sbjct: 692 ccggccttgggggtcttgctgaggtagagcaggtaggacgcgtggttggcgtcggcgagc 633

              
Query: 285 gtg 287
           |||
Sbjct: 632 gtg 630
to top
>gb|AF309383.1| Oryza sativa (japonica cultivar-group) clone S10202_1A putative
           glutathione S-transferase OsGSTF4 mRNA, complete cds
          Length = 1032

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 128/157 (81%)
 Strand = Plus / Minus

                                                                       
Query: 129 ggcgggagggggatggaggcgacggtcttggcccaggcggggcgggcggagatctcgtcc 188
           ||||||| |||||||| |||| |||||||   ||| || ||||| | |||||| ||||||
Sbjct: 736 ggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcgtcc 677

                                                                       
Query: 189 caccaagccttgacgtgggggcgggaggccaccaggtccgccttggggctcttggtgagc 248
           ||||| ||||||||||| || | | | || || || |||||| ||||  |||||| ||| 
Sbjct: 676 caccacgccttgacgtgcggcctgaacgcgacgagctccgccatgggcgtcttggagagg 617

                                                
Query: 249 atgaagaggtaggacatgtggttggcgtcggcgagcg 285
           |  |  |||||||||||||||||||||||||||||||
Sbjct: 616 aacagcaggtaggacatgtggttggcgtcggcgagcg 580
to top
>emb|AJ010295.1|ZMA010295 Zea mays mRNA for glutathione transferase III(a)
          Length = 906

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 102/123 (82%)
 Strand = Plus / Minus

                                                                       
Query: 165 gcggggcgggcggagatctcgtcccaccaagccttgacgtgggggcgggaggccaccagg 224
           ||||||||||||  |||  | |||||||| ||||||||||||||||||| ||| || || 
Sbjct: 684 gcggggcgggcgacgatggcctcccaccaggccttgacgtgggggcgggcggcgacgagc 625

                                                                       
Query: 225 tccgccttggggctcttggtgagcatgaagaggtaggacatgtggttggcgtcggcgagc 284
            | ||||||||| ||||| ||||   ||  |||||||||  |||||||||||||||||||
Sbjct: 624 ccggccttgggggtcttgctgaggtagagcaggtaggacgcgtggttggcgtcggcgagc 565

              
Query: 285 gtg 287
           |||
Sbjct: 564 gtg 562
to top
>emb|X06755.1|ZMGST3 Maize mRNA for GSH gluthathione S-transferase III (GST;EC 2.5.1.18)
          Length = 913

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 165 gcggggcgggcggagatctcgtcccaccaagccttgacgtgggggcggg 213
           ||||||||||||| |||  | |||||||| |||||||||||||||||||
Sbjct: 685 gcggggcgggcggcgatggcctcccaccaggccttgacgtgggggcggg 637
to top
>emb|X04455.1|ZMGGST3B Maize mRNA for glutathione-S-transferase GSTIII (clone GSTIIIB)
          Length = 859

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 266 gtggttggcgtcggcgagcgtg 287
           ||||||||||||||||||||||
Sbjct: 533 gtggttggcgtcggcgagcgtg 512



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 165 gcggggcgggcggagatctcgtcccaccaagccttgacgtgggg 208
           ||||||||||||  |||  | |||||||| ||||||||||||||
Sbjct: 632 gcggggcgggcgacgatggcctcccaccaggccttgacgtgggg 589
to top
>emb|X04375.1|ZMGST3A Maize mRNA for glutathione-S-transferase GSTIII (clone GSTIIIA)
          Length = 840

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 266 gtggttggcgtcggcgagcgtg 287
           ||||||||||||||||||||||
Sbjct: 514 gtggttggcgtcggcgagcgtg 493



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 165 gcggggcgggcggagatctcgtcccaccaagccttgacgtgggg 208
           ||||||||||||  |||  | |||||||| ||||||||||||||
Sbjct: 613 gcggggcgggcgacgatggcctcccaccaggccttgacgtgggg 570
to top
>gb|U59552.1|HGU59552 Hepatitis GB virus C, isolate 36, 5'-untranslated region
          Length = 590

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 125 gccgggcgggagggggatgga 145
           |||||||||||||||||||||
Sbjct: 351 gccgggcgggagggggatgga 371
to top
>gb|U59551.1|HGU59551 Hepatitis GB virus C, isolate 35, 5'-untranslated region
          Length = 591

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 125 gccgggcgggagggggatgga 145
           |||||||||||||||||||||
Sbjct: 351 gccgggcgggagggggatgga 371
to top
>gb|U59550.1|HGU59550 Hepatitis GB virus C, isolate 34, 5'-untranslated region
          Length = 590

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 125 gccgggcgggagggggatgga 145
           |||||||||||||||||||||
Sbjct: 351 gccgggcgggagggggatgga 371
to top
>gb|U59549.1|HGU59549 Hepatitis GB virus C, isolate 33, 5'-untranslated region
          Length = 591

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 125 gccgggcgggagggggatgga 145
           |||||||||||||||||||||
Sbjct: 351 gccgggcgggagggggatgga 371
to top
>gb|U59548.1|HGU59548 Hepatitis GB virus C, isolate 32, 5'-untranslated region
          Length = 591

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 125 gccgggcgggagggggatgga 145
           |||||||||||||||||||||
Sbjct: 351 gccgggcgggagggggatgga 371
to top
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    gacgccgggcgggaggggga 141
              ||||||||||||||||||||
Sbjct: 674243 gacgccgggcgggaggggga 674262
to top
>gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, complete sequence
          Length = 183026

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   ctcttggtgagcatgaagag 256
             ||||||||||||||||||||
Sbjct: 32888 ctcttggtgagcatgaagag 32907
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     cggggcgggcggagatctcg 185
               ||||||||||||||||||||
Sbjct: 1453948 cggggcgggcggagatctcg 1453967
to top
>ref|XM_957202.1| Neurospora crassa OR74A hypothetical protein (NCU07709.1) partial
           mRNA
          Length = 687

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 ggatggaggcgacggtcttg 158
           ||||||||||||||||||||
Sbjct: 477 ggatggaggcgacggtcttg 496
to top
>ref|XM_328414.1| Neurospora crassa OR74A hypothetical protein (NCU07709.1) partial
           mRNA
          Length = 687

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 ggatggaggcgacggtcttg 158
           ||||||||||||||||||||
Sbjct: 477 ggatggaggcgacggtcttg 496
to top
>gb|AC107801.14| Mus musculus, clone RP23-29M6, complete sequence
          Length = 283075

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      agcagcaaacaccaagaatt 24
              ||||||||||||||||||||
Sbjct: 141225 agcagcaaacaccaagaatt 141244
to top
>ref|XM_780527.1| PREDICTED: Strongylocentrotus purpuratus similar to Rab40b, member
           RAS oncogene family (LOC580472), mRNA
          Length = 678

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 263 catgtggttggcgtcggcga 282
           ||||||||||||||||||||
Sbjct: 570 catgtggttggcgtcggcga 551
to top
>gb|BT009600.1| Triticum aestivum clone wre1n.pk0078.d7:fis, full insert mRNA
           sequence
          Length = 583

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 tcccaccaagccttgacgtg 205
           ||||||||||||||||||||
Sbjct: 358 tcccaccaagccttgacgtg 339
to top
>ref|XM_779903.1| PREDICTED: Strongylocentrotus purpuratus similar to Rab40b, member
           RAS oncogene family (LOC579808), mRNA
          Length = 474

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 263 catgtggttggcgtcggcga 282
           ||||||||||||||||||||
Sbjct: 366 catgtggttggcgtcggcga 347
to top
>dbj|AB015870.1| Vitis vinifera gene for phenylalanine ammonia-lyase, partial cds
          Length = 1938

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 cgccgggcgggagggggatg 143
           ||||||||||||||||||||
Sbjct: 471 cgccgggcgggagggggatg 490
to top
>emb|AL845417.3| Mouse DNA sequence from clone RP23-20I9 on chromosome 2, complete
              sequence
          Length = 144844

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      agcagcaaacaccaagaatt 24
              ||||||||||||||||||||
Sbjct: 130979 agcagcaaacaccaagaatt 130960


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,631,192
Number of Sequences: 3902068
Number of extensions: 2631192
Number of successful extensions: 53348
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53241
Number of HSP's gapped (non-prelim): 97
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top