ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast74f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009523.1| Triticum aestivum clone wr1.pk0107.a5:fis, full i... 369 5e-99
2gb|AY110327.1| Zea mays CL227_1 mRNA sequence 180 2e-42
3ref|XM_550040.1| Oryza sativa (japonica cultivar-group), mRNA 161 2e-36
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
5dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
6dbj|AK112014.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
7dbj|AK111908.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
8gb|BT016653.1| Zea mays clone Contig486 mRNA sequence 157 4e-35
9gb|BT019106.1| Zea mays clone Contig708.F mRNA sequence 149 9e-33
10gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence 121 2e-24
11ref|NM_111126.2| Arabidopsis thaliana STE1 (STEROL 1); C-5 stero... 94 4e-16
12gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC... 94 4e-16
13gb|AY088527.1| Arabidopsis thaliana clone 7564 mRNA, complete se... 94 4e-16
14dbj|AK176721.1| Arabidopsis thaliana mRNA for sterol-C5-desatura... 94 4e-16
15gb|AF105034.1|AF105034 Arabidopsis thaliana delta7 sterol C-5 de... 94 4e-16
16gb|AF069468.1|AF069468 Arabidopsis thaliana sterol-C5-desaturase... 94 4e-16
17emb|X90454.1|ATRNASC5D A.thaliana mRNA for sterol-C5-desaturase 86 1e-13
18gb|DQ122180.1| Gossypium hirsutum sterol-C5-desaturase DWF7 mRNA... 80 7e-12
19dbj|AB231157.1| Zinnia elegans ZeSTE1 mRNA for delta7 sterol C-5... 64 4e-07
20gb|AE006470.1| Chlorobium tepidum TLS, complete genome 46 0.093
21gb|AF099969.1|AF099969 Nicotiana tabacum sterol-C5(6)-desaturase... 44 0.37
22gb|AC166349.4| Mus musculus BAC clone RP24-192I21 from chromosom... 42 1.5
23ref|XM_643170.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 42 1.5
24gb|AC159243.2| Mus musculus BAC clone RP24-274F15 from chromosom... 42 1.5
25gb|AC158675.4| Mus musculus 6 BAC RP23-180J21 (Roswell Park Canc... 42 1.5
26emb|AL031427.15|HS167A19 Human DNA sequence from clone RP1-167A1... 42 1.5
27emb|CR388178.5| Zebrafish DNA sequence from clone DKEY-114D20 in... 42 1.5
28emb|CR628370.28| Zebrafish DNA sequence from clone DKEY-33L16 in... 42 1.5
29ref|XM_366390.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.7
30gb|AC135780.2| Homo sapiens chromosome 16 clone CTD-2320F3, comp... 40 5.7
31emb|BX284613.3| Human DNA sequence from clone RP5-1092L12 on chr... 40 5.7
32emb|AL360224.14| Human DNA sequence from clone RP11-471A8 on chr... 40 5.7
33gb|AC025161.18| Homo sapiens 12 BAC RP11-669B18 (Roswell Park Ca... 40 5.7
34emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277... 40 5.7
35emb|AL121988.10|HSDJ34M23 Human DNA sequence from clone RP1-34M2... 40 5.7
36ref|XM_794677.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 5.7
37gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, com... 40 5.7
38gb|AF081794.1|AF081794 Nicotiana tabacum sterol-C5(6)-desaturase... 40 5.7
39emb|CR848665.9| Zebrafish DNA sequence from clone CH211-276C2 in... 40 5.7 
>gb|BT009523.1| Triticum aestivum clone wr1.pk0107.a5:fis, full insert mRNA
           sequence
          Length = 1210

 Score =  369 bits (186), Expect = 5e-99
 Identities = 222/234 (94%)
 Strand = Plus / Minus

                                                                       
Query: 192 cacgagctcagtccttcttgaggagatcctccggctcgcggagggtgccaaacagccaat 251
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 792 cacgagctcagtccttcttgaggagatcctccggctcgcggagggtgccaaacagccagt 733

                                                                       
Query: 252 ccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtggtggatggtgtggt 311
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 732 ccatccacacggtgtagtggccatagttgtgccggtacgtcgtgtggtggatggtgtggt 673

                                                                       
Query: 312 aaccggcgcccatcaccggccagaccttgccgtggatgcagtcgtggatgttggccgtcc 371
           | |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 672 agccggcgcccatcaccggccagatcttgccgtggatgcagtcgtggatgtttgccgtcc 613

                                                                 
Query: 372 acaccgcctctatgaatatgagggcgacgtgcgtccggaaatgcaccgggagaa 425
           |||||||||||||||||| ||| || | |||||||| ||| |||| ||||||||
Sbjct: 612 acaccgcctctatgaataggagagcaatgtgcgtcctgaagtgcatcgggagaa 559



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Minus

                                                            
Query: 7   catcccagaggaacaaagctaaataaacaaccttattatttcaacctac 55
           ||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 988 catcccagaggaacaaagctaaatagacaaccttattatttccacctac 940
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>gb|AY110327.1| Zea mays CL227_1 mRNA sequence
          Length = 984

 Score =  180 bits (91), Expect = 2e-42
 Identities = 160/183 (87%)
 Strand = Plus / Minus

                                                                       
Query: 193 acgagctcagtccttcttgaggagatcctccggctcgcggagggtgccaaacagccaatc 252
           |||| ||||| |||||||||||| ||| || ||||| ||||| || ||||||| ||| ||
Sbjct: 676 acgaactcaggccttcttgaggatatcatctggctcacggagcgtaccaaacatccagtc 617

                                                                       
Query: 253 catccacacggtgtagtggccatagttgtgccggtatgtcgtgtggtggatggtgtggta 312
           |||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 616 catccagacggtgtagtggccatagttgtggcggtaagtcgtatggtggatggtgtgata 557

                                                                       
Query: 313 accggcgcccatcaccggccagaccttgccgtggatgcagtcgtggatgttggccgtcca 372
            || |||||||| || ||||| ||||||||||| ||||||||||||||||| | ||||||
Sbjct: 556 cccagcgcccatgactggccataccttgccgtgaatgcagtcgtggatgtttgtcgtcca 497

              
Query: 373 cac 375
           |||
Sbjct: 496 cac 494
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>ref|XM_550040.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1242

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                       
Query: 203 tccttcttgaggagatcctccggctcgcggagggtgccaaacagccaatccatccacacg 262
           |||||||| | || ||| || ||||| || |||||||| |||| ||| ||||||||||||
Sbjct: 899 tccttcttcaagatatcttctggctctcgaagggtgccgaacatccagtccatccacacg 840

                                                                       
Query: 263 gtgtagtggccatagttgtgccggtatgtcgtgtggtggatggtgtggtaaccggcgccc 322
           |||||||||||||||||||| |||||||| || ||||| |||||||| || || || |||
Sbjct: 839 gtgtagtggccatagttgtgacggtatgttgtatggtgaatggtgtgatagccagcaccc 780

                                                                       
Query: 323 atcaccggccagaccttgccgtggatgcagtcgtggatgttggccgtccacaccgcctct 382
           || |||||||| ||||||||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 779 atgaccggccaaaccttgccgtgaatgcagtcatggatgttagttgtccacacggcctct 720

                
Query: 383 atgaa 387
           |||||
Sbjct: 719 atgaa 715
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                           
Query: 203     tccttcttgaggagatcctccggctcgcggagggtgccaaacagccaatccatccacacg 262
               |||||||| | || ||| || ||||| || |||||||| |||| ||| ||||||||||||
Sbjct: 1890916 tccttcttcaagatatcttctggctctcgaagggtgccgaacatccagtccatccacacg 1890857

                                                                           
Query: 263     gtgtagtggccatagttgtgccggtatgtcgtgtggtggatggtgtggtaaccggcgccc 322
               |||||||||||||||||||| |||||||| || ||||| |||||||| || || || |||
Sbjct: 1890856 gtgtagtggccatagttgtgacggtatgttgtatggtgaatggtgtgatagccagcaccc 1890797

                                                                           
Query: 323     atcaccggccagaccttgccgtggatgcagtcgtggatgttggccgtccacaccgcctct 382
               || |||||||| ||||||||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 1890796 atgaccggccaaaccttgccgtgaatgcagtcatggatgttagttgtccacacggcctct 1890737

                    
Query: 383     atgaa 387
               |||||
Sbjct: 1890736 atgaa 1890732
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>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0083M16
          Length = 179428

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                          
Query: 203    tccttcttgaggagatcctccggctcgcggagggtgccaaacagccaatccatccacacg 262
              |||||||| | || ||| || ||||| || |||||||| |||| ||| ||||||||||||
Sbjct: 132298 tccttcttcaagatatcttctggctctcgaagggtgccgaacatccagtccatccacacg 132239

                                                                          
Query: 263    gtgtagtggccatagttgtgccggtatgtcgtgtggtggatggtgtggtaaccggcgccc 322
              |||||||||||||||||||| |||||||| || ||||| |||||||| || || || |||
Sbjct: 132238 gtgtagtggccatagttgtgacggtatgttgtatggtgaatggtgtgatagccagcaccc 132179

                                                                          
Query: 323    atcaccggccagaccttgccgtggatgcagtcgtggatgttggccgtccacaccgcctct 382
              || |||||||| ||||||||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 132178 atgaccggccaaaccttgccgtgaatgcagtcatggatgttagttgtccacacggcctct 132119

                   
Query: 383    atgaa 387
              |||||
Sbjct: 132118 atgaa 132114
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>dbj|AK112014.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G10, full
           insert sequence
          Length = 1242

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                       
Query: 203 tccttcttgaggagatcctccggctcgcggagggtgccaaacagccaatccatccacacg 262
           |||||||| | || ||| || ||||| || |||||||| |||| ||| ||||||||||||
Sbjct: 899 tccttcttcaagatatcttctggctctcgaagggtgccgaacatccagtccatccacacg 840

                                                                       
Query: 263 gtgtagtggccatagttgtgccggtatgtcgtgtggtggatggtgtggtaaccggcgccc 322
           |||||||||||||||||||| |||||||| || ||||| |||||||| || || || |||
Sbjct: 839 gtgtagtggccatagttgtgacggtatgttgtatggtgaatggtgtgatagccagcaccc 780

                                                                       
Query: 323 atcaccggccagaccttgccgtggatgcagtcgtggatgttggccgtccacaccgcctct 382
           || |||||||| ||||||||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 779 atgaccggccaaaccttgccgtgaatgcagtcatggatgttagttgtccacacggcctct 720

                
Query: 383 atgaa 387
           |||||
Sbjct: 719 atgaa 715
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>dbj|AK111908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069O22, full
           insert sequence
          Length = 1253

 Score =  161 bits (81), Expect = 2e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                       
Query: 203 tccttcttgaggagatcctccggctcgcggagggtgccaaacagccaatccatccacacg 262
           |||||||| | || ||| || ||||| || |||||||| |||| ||| ||||||||||||
Sbjct: 907 tccttcttcaagatatcttctggctctcgaagggtgccgaacatccagtccatccacacg 848

                                                                       
Query: 263 gtgtagtggccatagttgtgccggtatgtcgtgtggtggatggtgtggtaaccggcgccc 322
           |||||||||||||||||||| |||||||| || ||||| |||||||| || || || |||
Sbjct: 847 gtgtagtggccatagttgtgacggtatgttgtatggtgaatggtgtgatagccagcaccc 788

                                                                       
Query: 323 atcaccggccagaccttgccgtggatgcagtcgtggatgttggccgtccacaccgcctct 382
           || |||||||| ||||||||||| |||||||| |||||||| |  |||||||| ||||||
Sbjct: 787 atgaccggccaaaccttgccgtgaatgcagtcatggatgttagttgtccacacggcctct 728

                
Query: 383 atgaa 387
           |||||
Sbjct: 727 atgaa 723
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>gb|BT016653.1| Zea mays clone Contig486 mRNA sequence
          Length = 1189

 Score =  157 bits (79), Expect = 4e-35
 Identities = 157/183 (85%)
 Strand = Plus / Minus

                                                                       
Query: 193 acgagctcagtccttcttgaggagatcctccggctcgcggagggtgccaaacagccaatc 252
           |||| ||||| |||||||||||| ||| || ||||| ||||| || ||||||| ||| ||
Sbjct: 942 acgaactcaggccttcttgaggatatcatctggctcacggagcgtaccaaacatccagtc 883

                                                                       
Query: 253 catccacacggtgtagtggccatagttgtgccggtatgtcgtgtggtggatggtgtggta 312
           |||||| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 882 catccagacggtgtagtgaccatagttgtggcggtaagtcgtatggtggatggtgtgata 823

                                                                       
Query: 313 accggcgcccatcaccggccagaccttgccgtggatgcagtcgtggatgttggccgtcca 372
            || || ||||| || ||||| | ||||||||| ||||||||||||||||| | ||||||
Sbjct: 822 ccccgctcccatgactggccataacttgccgtgaatgcagtcgtggatgtttgtcgtcca 763

              
Query: 373 cac 375
           |||
Sbjct: 762 cac 760
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>gb|BT019106.1| Zea mays clone Contig708.F mRNA sequence
          Length = 650

 Score =  149 bits (75), Expect = 9e-33
 Identities = 156/183 (85%)
 Strand = Plus / Minus

                                                                       
Query: 193 acgagctcagtccttcttgaggagatcctccggctcgcggagggtgccaaacagccaatc 252
           |||| ||||| |||||||||||| ||| || || || ||||| || ||||||| ||| ||
Sbjct: 414 acgaactcaggccttcttgaggatatcatctgggtcacggagcgtaccaaacatccagtc 355

                                                                       
Query: 253 catccacacggtgtagtggccatagttgtgccggtatgtcgtgtggtggatggtgtggta 312
           |||||| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||| ||
Sbjct: 354 catccagacggtgtagtgaccatagttgtggcggtaagtcgtatggtggatggtgtgata 295

                                                                       
Query: 313 accggcgcccatcaccggccagaccttgccgtggatgcagtcgtggatgttggccgtcca 372
            || || ||||| || ||||| | ||||||||| ||||||||||||||||| | ||||||
Sbjct: 294 ccccgctcccatgactggccataacttgccgtgaatgcagtcgtggatgtttgtcgtcca 235

              
Query: 373 cac 375
           |||
Sbjct: 234 cac 232
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>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence
          Length = 132380

 Score =  121 bits (61), Expect = 2e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                          
Query: 239    ccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtgg 298
              ||||||| |||||||||||| | |||||| ||||| ||||| |||  ||| || ||||||
Sbjct: 131210 ccaaacatccaatccatccaaatggtgtaatggccgtagttatgcttgtaagttgtgtgg 131151

                                                                          
Query: 299    tggatggtgtggtaaccggcgcccatcaccggccagaccttgccgtggatgcagtcgtgg 358
              || ||||||||||| || || ||||| || |||||||  ||||| |||||||||||||||
Sbjct: 131150 tgtatggtgtggtatccagctcccattacaggccagatgttgccatggatgcagtcgtgg 131091

                                           
Query: 359    atgttggccgtccacaccgcctctatgaa 387
              |||||||||||||| || ||||| |||||
Sbjct: 131090 atgttggccgtccatacggcctccatgaa 131062
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>ref|NM_111126.2| Arabidopsis thaliana STE1 (STEROL 1); C-5 sterol desaturase
           AT3G02580 (STE1) mRNA, complete cds
          Length = 1169

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                       
Query: 238 gccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtg 297
           |||||||| |||||||||||| | ||| || || |||||||| |||  ||||||||||||
Sbjct: 928 gccaaacatccaatccatccatatggtataatgaccatagttatgcttgtatgtcgtgtg 869

                                                                       
Query: 298 gtggatggtgtggtaaccggcgcccatcaccggccagaccttgccgtggatgcagtcgtg 357
           ||| || || ||||| || || ||||| || |||||||  ||||| ||||||||||| ||
Sbjct: 868 gtgtatcgtatggtatcctgcacccattactggccagatgttgccatggatgcagtcatg 809

                          
Query: 358 gatgttggccgtcca 372
           |||||| ||||||||
Sbjct: 808 gatgttcgccgtcca 794
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>gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence,
             complete sequence
          Length = 103904

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                         
Query: 238   gccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtg 297
             |||||||| |||||||||||| | ||| || || |||||||| |||  ||||||||||||
Sbjct: 64193 gccaaacatccaatccatccatatggtataatgaccatagttatgcttgtatgtcgtgtg 64134

                                                                         
Query: 298   gtggatggtgtggtaaccggcgcccatcaccggccagaccttgccgtggatgcagtcgtg 357
             ||| || || ||||| || || ||||| || |||||||  ||||| ||||||||||| ||
Sbjct: 64133 gtgtatcgtatggtatcctgcacccattactggccagatgttgccatggatgcagtcatg 64074

                            
Query: 358   gatgttggccgtcca 372
             |||||| ||||||||
Sbjct: 64073 gatgttcgccgtcca 64059
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>gb|AY088527.1| Arabidopsis thaliana clone 7564 mRNA, complete sequence
          Length = 1163

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                       
Query: 238 gccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtg 297
           |||||||| |||||||||||| | ||| || || |||||||| |||  ||||||||||||
Sbjct: 928 gccaaacatccaatccatccatatggtataatgaccatagttatgcttgtatgtcgtgtg 869

                                                                       
Query: 298 gtggatggtgtggtaaccggcgcccatcaccggccagaccttgccgtggatgcagtcgtg 357
           ||| || || ||||| || || ||||| || |||||||  ||||| ||||||||||| ||
Sbjct: 868 gtgtatcgtatggtatcctgcacccattactggccagatgttgccatggatgcagtcatg 809

                          
Query: 358 gatgttggccgtcca 372
           |||||| ||||||||
Sbjct: 808 gatgttcgccgtcca 794
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>dbj|AK176721.1| Arabidopsis thaliana mRNA for sterol-C5-desaturase, complete cds,
           clone: RAFL25-26-E18
          Length = 1113

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                       
Query: 238 gccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtg 297
           |||||||| |||||||||||| | ||| || || |||||||| |||  ||||||||||||
Sbjct: 905 gccaaacatccaatccatccatatggtataatgaccatagttatgcttgtatgtcgtgtg 846

                                                                       
Query: 298 gtggatggtgtggtaaccggcgcccatcaccggccagaccttgccgtggatgcagtcgtg 357
           ||| || || ||||| || || ||||| || |||||||  ||||| ||||||||||| ||
Sbjct: 845 gtgtatcgtatggtatcctgcacccattactggccagatgttgccatggatgcagtcatg 786

                          
Query: 358 gatgttggccgtcca 372
           |||||| ||||||||
Sbjct: 785 gatgttcgccgtcca 771
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>gb|AF105034.1|AF105034 Arabidopsis thaliana delta7 sterol C-5 desaturase (STE1) gene,
            complete cds
          Length = 2294

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                        
Query: 238  gccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtg 297
            |||||||| |||||||||||| | ||| || || |||||||| |||  ||||||||||||
Sbjct: 1646 gccaaacatccaatccatccatatggtataatgaccatagttatgcttgtatgtcgtgtg 1587

                                                                        
Query: 298  gtggatggtgtggtaaccggcgcccatcaccggccagaccttgccgtggatgcagtcgtg 357
            ||| || || ||||| || || ||||| || |||||||  ||||| ||||||||||| ||
Sbjct: 1586 gtgtatcgtatggtatcctgcacccattactggccagatgttgccatggatgcagtcatg 1527

                           
Query: 358  gatgttggccgtcca 372
            |||||| ||||||||
Sbjct: 1526 gatgttcgccgtcca 1512
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>gb|AF069468.1|AF069468 Arabidopsis thaliana sterol-C5-desaturase gene, complete cds
          Length = 3004

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                        
Query: 238  gccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtg 297
            |||||||| |||||||||||| | ||| || || |||||||| |||  ||||||||||||
Sbjct: 2746 gccaaacatccaatccatccatatggtataatgaccatagttatgcttgtatgtcgtgtg 2687

                                                                        
Query: 298  gtggatggtgtggtaaccggcgcccatcaccggccagaccttgccgtggatgcagtcgtg 357
            ||| || || ||||| || || ||||| || |||||||  ||||| ||||||||||| ||
Sbjct: 2686 gtgtatcgtatggtatcctgcacccattactggccagatgttgccatggatgcagtcatg 2627

                           
Query: 358  gatgttggccgtcca 372
            |||||| ||||||||
Sbjct: 2626 gatgttcgccgtcca 2612
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>emb|X90454.1|ATRNASC5D A.thaliana mRNA for sterol-C5-desaturase
          Length = 1175

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                       
Query: 238 gccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtg 297
           |||||||| |||||||||||| | ||| || || |||||||| |||  ||||||||||||
Sbjct: 900 gccaaacatccaatccatccatatggtataatgaccatagttatgcttgtatgtcgtgtg 841

                                                                       
Query: 298 gtggatggtgtggtaaccggcgcccatcaccggccagaccttgccgtggatgcagtcgtg 357
           ||| || || ||||| || || ||||| || |||||||  ||||| ||||||||||| ||
Sbjct: 840 gtgtatcgtatggtatcctgcacccattactggccagatgttgccatggatgcagtcatg 781

                      
Query: 358 gatgttggccg 368
           |||||| ||||
Sbjct: 780 gatgttcgccg 770
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>gb|DQ122180.1| Gossypium hirsutum sterol-C5-desaturase DWF7 mRNA, partial cds
          Length = 921

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 115/140 (82%)
 Strand = Plus / Minus

                                                                       
Query: 233 agggtgccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtc 292
           ||||| |||| || |||||||||||| | |||||| ||||||||||| || || || || 
Sbjct: 395 agggttccaagcatccaatccatccaaatggtgtaatggccatagttatggcgatacgta 336

                                                                       
Query: 293 gtgtggtggatggtgtggtaaccggcgcccatcaccggccagaccttgccgtggatgcag 352
           |||||||| || |||||||| || || |||||||| ||||| |  ||||| |||||||| 
Sbjct: 335 gtgtggtgaatagtgtggtacccagcacccatcacaggccatagtttgccatggatgcaa 276

                               
Query: 353 tcgtggatgttggccgtcca 372
           || || ||||| ||||||||
Sbjct: 275 tcatgaatgtttgccgtcca 256
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>dbj|AB231157.1| Zinnia elegans ZeSTE1 mRNA for delta7 sterol C-5 desaturase,
           complete cds
          Length = 1104

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 233 agggtgccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtc 292
           ||||| || |||| ||| |||||||| || || || || |||||||| ||||||||||| 
Sbjct: 779 agggtaccgaacatccagtccatccaaactgtataatgcccatagttatgccggtatgtg 720

                                                                       
Query: 293 gtgtggtggatggtgtggtaaccggcgcccatcaccggccagaccttgccgtggatgcag 352
           ||||| || || |||||||| || || ||||| |||||||| | ||| || || ||||| 
Sbjct: 719 gtgtgatgaattgtgtggtaccctgcacccattaccggccaaaacttcccatgaatgcaa 660

                               
Query: 353 tcgtggatgttggccgtcca 372
           ||||| ||||| || |||||
Sbjct: 659 tcgtgaatgtttgctgtcca 640
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 322    catcaccggccagaccttgccgt 344
              |||||||||||||||||||||||
Sbjct: 766132 catcaccggccagaccttgccgt 766154
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>gb|AF099969.1|AF099969 Nicotiana tabacum sterol-C5(6)-desaturase homolog mRNA, complete
           cds
          Length = 1148

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                       
Query: 242 aacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtggtgg 301
           |||| ||| |||||||| |  ||||| || ||||| || |||||||| || || ||||||
Sbjct: 896 aacatccagtccatccatattgtgtaatgaccataattatgccggtacgtagtatggtgg 837

                                                 
Query: 302 atggtgtggtaaccggcgcccatcaccggccagacctt 339
           ||||| ||||| || || ||||| || ||||| |||||
Sbjct: 836 atggtatggtagccagcacccataactggccacacctt 799
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>gb|AC166349.4| Mus musculus BAC clone RP24-192I21 from chromosome 12, complete
             sequence
          Length = 168529

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    agaggaacaaagctaaataaa 33
             |||||||||||||||||||||
Sbjct: 54993 agaggaacaaagctaaataaa 54973
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>ref|XM_643170.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (495.t00001)
           partial mRNA
          Length = 435

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 27  aaataaacaaccttattatttcaac 51
           |||||||||| ||||||||||||||
Sbjct: 311 aaataaacaatcttattatttcaac 335
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>gb|AC159243.2| Mus musculus BAC clone RP24-274F15 from chromosome 12, complete sequence
          Length = 163575

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     agaggaacaaagctaaataaa 33
              |||||||||||||||||||||
Sbjct: 126800 agaggaacaaagctaaataaa 126780
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>gb|AC158675.4| Mus musculus 6 BAC RP23-180J21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 226948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 157   aagactagtacagagatggat 177
             |||||||||||||||||||||
Sbjct: 35125 aagactagtacagagatggat 35145
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>emb|AL031427.15|HS167A19 Human DNA sequence from clone RP1-167A19 on chromosome 1p32.1-33,
              complete sequence
          Length = 152037

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 8      atcccagaggaacaaagctaa 28
              |||||||||||||||||||||
Sbjct: 122483 atcccagaggaacaaagctaa 122463
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>emb|CR388178.5| Zebrafish DNA sequence from clone DKEY-114D20 in linkage group 22,
              complete sequence
          Length = 171742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 22     aagctaaataaacaaccttattatt 46
              |||||||| ||||||||||||||||
Sbjct: 118727 aagctaaagaaacaaccttattatt 118751
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>emb|CR628370.28| Zebrafish DNA sequence from clone DKEY-33L16 in linkage group 22,
             complete sequence
          Length = 190967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 22    aagctaaataaacaaccttattatt 46
             |||||||| ||||||||||||||||
Sbjct: 31447 aagctaaagaaacaaccttattatt 31471
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>ref|XM_366390.1| Magnaporthe grisea 70-15 hypothetical protein (MG10608.4) partial
            mRNA
          Length = 5289

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 345  ggatgcagtcgtggatgttg 364
            ||||||||||||||||||||
Sbjct: 1747 ggatgcagtcgtggatgttg 1728
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>gb|AC135780.2| Homo sapiens chromosome 16 clone CTD-2320F3, complete sequence
          Length = 125603

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   atcagaaagaacagatggag 124
             ||||||||||||||||||||
Sbjct: 38511 atcagaaagaacagatggag 38530
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>emb|BX284613.3| Human DNA sequence from clone RP5-1092L12 on chromosome 1 Contains
            the 3' end of a novel gene (FLJ23550) and a novel
            pseudogene, complete sequence
          Length = 106576

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 4    gcacatcccagaggaacaaa 23
            ||||||||||||||||||||
Sbjct: 7914 gcacatcccagaggaacaaa 7933
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>emb|AL360224.14| Human DNA sequence from clone RP11-471A8 on chromosome Xq22.2-23
             Contains the 5' end of a novel gene (FLJ22679, FLJ36808)
             and a CpG island, complete sequence
          Length = 157162

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gaaagaacagatggagggtt 128
             ||||||||||||||||||||
Sbjct: 16740 gaaagaacagatggagggtt 16759
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>gb|AC025161.18| Homo sapiens 12 BAC RP11-669B18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 83265

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    caagactgaaacatcacact 78
             ||||||||||||||||||||
Sbjct: 14484 caagactgaaacatcacact 14503
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>emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277C14 on chromosome 1 Contains part
             of the DNM3 gene for dynamin 3, complete sequence
          Length = 155941

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   ttcacaagactagtacagag 171
             ||||||||||||||||||||
Sbjct: 48119 ttcacaagactagtacagag 48138
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>emb|AL121988.10|HSDJ34M23 Human DNA sequence from clone RP1-34M23 on chromosome 1p34.3-36.11
             Contains the 3' end of a variant of a novel gene, the GJB5
             gene for gap junction protein, beta 5 (connexin 31.1), the
             GJB4 gene for gap junction protein, beta 4 (connexin
             30.3), the GJB3 gene for gap junction protein, beta 3,
             31kDa (connexin 31) and the GJA4 gene for gap junction
             protein, alpha 4, 37kDa (connexin 37), complete sequence
          Length = 126876

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   tcatcagaaagaacagatgg 122
             ||||||||||||||||||||
Sbjct: 98333 tcatcagaaagaacagatgg 98314
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>ref|XM_794677.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC575235 (LOC575235), mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 239 ccaaacagccaatccatccacacggtgt 266
           |||||||||||||||| ||||| |||||
Sbjct: 101 ccaaacagccaatccagccacagggtgt 128
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>gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, complete sequence
          Length = 156100

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   atcagaaagaacagatggag 124
             ||||||||||||||||||||
Sbjct: 73130 atcagaaagaacagatggag 73111
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>gb|AF081794.1|AF081794 Nicotiana tabacum sterol-C5(6)-desaturase mRNA, complete cds
          Length = 1155

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 239 ccaaacagccaatccatccacacggtgtagtggccatagttgtgccggtatgtcgtgtgg 298
           ||||||| |||||||||||| |  ||||| || ||||| || || ||||||||| | |||
Sbjct: 875 ccaaacatccaatccatccatattgtgtaatgaccataattatggcggtatgtcctatgg 816

                   
Query: 299 tggatggt 306
           || |||||
Sbjct: 815 tgaatggt 808
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>emb|CR848665.9| Zebrafish DNA sequence from clone CH211-276C2 in linkage group 15,
              complete sequence
          Length = 158232

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    atcagaaagaacagatggag 124
              ||||||||||||||||||||
Sbjct: 129167 atcagaaagaacagatggag 129186


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,352,609
Number of Sequences: 3902068
Number of extensions: 3352609
Number of successful extensions: 59725
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59652
Number of HSP's gapped (non-prelim): 72
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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