ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast74e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell... 44 0.13
2gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell... 44 0.13
3gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 ... 44 0.13
4gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence 44 0.13
5gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence 44 0.13
6gb|DQ017449.1| Drosophila melanogaster strain Russian 2b CG16963... 42 0.50
7gb|DQ017448.1| Drosophila melanogaster strain Oregon R CG16963 g... 42 0.50
8gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33... 42 0.50
9gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43... 42 0.50
10gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, r... 42 0.50
11gb|AC126942.4| Mus musculus BAC clone RP23-174P9 from chromosome... 40 2.0
12ref|XM_651272.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 2.0
13ref|XM_652384.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 2.0
14ref|XM_721148.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 2.0
15emb|BX324134.11| Zebrafish DNA sequence from clone DKEY-103K8 in... 40 2.0
16gb|AY118412.1| Drosophila melanogaster RE66446 full insert cDNA 40 2.0
17gb|AC010574.5| Drosophila melanogaster 3L BAC RP98-7L7 (Roswell ... 40 2.0
18ref|NM_140520.1| Drosophila melanogaster CG7427-RA (CG7427), mRNA 40 2.0
19gb|AC154218.2| Mus musculus BAC clone RP24-357N6 from chromosome... 40 2.0
20dbj|AK037423.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 2.0
21gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, co... 40 2.0
22emb|BX005477.7| Zebrafish DNA sequence from clone CH211-131K10 i... 40 2.0
23gb|AE003530.3| Drosophila melanogaster chromosome 3L, section 55... 40 2.0
24emb|BX293555.7| Mouse DNA sequence from clone RP23-202M10 on chr... 40 2.0
25dbj|AB009314.1| Streptococcus bovis gene for proton-translocatin... 40 2.0
26gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 38 7.8
27gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 38 7.8
28gb|AC110567.10| Mus musculus chromosome 5, clone RP23-304I24, co... 38 7.8
29gb|AC136518.3| Mus musculus BAC clone RP23-304K22 from chromosom... 38 7.8
30gb|AC036145.11| Mus musculus chromosome 5, clone RP23-439C22, co... 38 7.8
31gb|AC115948.12| Mus musculus chromosome 16, clone RP24-568J12, c... 38 7.8
32gb|AC142271.3| Mus musculus chromosome 5 clone RP24-69A21, compl... 38 7.8
33gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosom... 38 7.8
34gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosom... 38 7.8
35gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete... 38 7.8
36gb|AC098743.3| Mus musculus BAC clone RP23-122O4 from 1, complet... 38 7.8
37ref|XM_648464.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 38 7.8
38gb|AC118755.7| Homo sapiens chromosome 17, clone RP11-55L4, comp... 38 7.8
39gb|AC007091.3| Homo sapiens BAC clone RP11-71F18 from 7, complet... 38 7.8
40ref|XM_674056.1| Plasmodium berghei strain ANKA hypothetical pro... 38 7.8
41gb|AC152158.10| Medicago truncatula clone mth2-139g10, complete ... 38 7.8
42gb|AC146590.25| Medicago truncatula clone mth2-145p10, complete ... 38 7.8
43emb|AL356794.10| Human DNA sequence from clone RP11-551A11 on ch... 38 7.8
44emb|AL032822.1|HS59B16 Human DNA sequence from clone RP1-59B16 o... 38 7.8
45emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 38 7.8
46emb|BX470243.12| Zebrafish DNA sequence from clone CH211-79J19 i... 38 7.8
47emb|CR749537.1| Homo sapiens mRNA; cDNA DKFZp686I15206 (from clo... 38 7.8
48gb|AC153626.5| Mus musculus 6 BAC RP23-245J24 (Roswell Park Canc... 38 7.8
49gb|AC149877.2| Xenopus tropicalis clone CH216-23F19, complete se... 38 7.8
50dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.8
51dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.8
52gb|AC080165.6| Homo sapiens BAC clone RP11-747L21 from 2, comple... 38 7.8
53gb|AC157525.2| Pan troglodytes BAC clone CH251-519D18 from chrom... 38 7.8
54gb|AC148307.3| Pan troglodytes BAC clone RP43-44G20 from chromos... 38 7.8
55gb|AC010093.8| Homo sapiens BAC clone RP11-323O5 from 2, complet... 38 7.8
56gb|AC005520.2|AC005520 Homo sapiens PAC clone RP5-1021I20 from 1... 38 7.8
57gb|AC087501.16| Homo sapiens chromosome 17, clone RP11-565F19, c... 38 7.8
58gb|AC079753.7| Homo sapiens BAC clone RP11-67L14 from 2, complet... 38 7.8
59dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic D... 38 7.8
60dbj|AP005866.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.8
61gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, comple... 38 7.8
62tpe|BN000002.1|HSA000002 TPA: TPA_exp: Homo sapiens complete int... 38 7.8
63gb|AC006249.1|AC006249 Homo sapiens chromosome 18, clone hRPK.43... 38 7.8
64gb|AC108440.8| Mus musculus chromosome 19, clone RP23-379H7, com... 38 7.8
65gb|AC134825.5| Mus musculus BAC clone RP24-456L17 from 9, comple... 38 7.8
66gb|AC004045.1|AC004045 Homo sapiens chromosome 4 clone B139M23 m... 38 7.8
67dbj|AP006632.1| Lotus japonicus genomic DNA, chromosome 2, clone... 38 7.8
68gb|AC171728.1| Lycopersicon esculentum chromosome 01 clone C01HB... 38 7.8 
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 191590

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 136   tgaaattaaagaaaggaaatta 157
             ||||||||||||||||||||||
Sbjct: 31959 tgaaattaaagaaaggaaatta 31938
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>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177941

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 136    tgaaattaaagaaaggaaatta 157
              ||||||||||||||||||||||
Sbjct: 136063 tgaaattaaagaaaggaaatta 136042
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>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete
              sequence
          Length = 299943

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 136    tgaaattaaagaaaggaaatta 157
              ||||||||||||||||||||||
Sbjct: 177950 tgaaattaaagaaaggaaatta 177929
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>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence
          Length = 282600

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 4     caaaaagggaaaattatttcaa 25
             ||||||||||||||||||||||
Sbjct: 53588 caaaaagggaaaattatttcaa 53567
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>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence
          Length = 339089

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 4     caaaaagggaaaattatttcaa 25
             ||||||||||||||||||||||
Sbjct: 25665 caaaaagggaaaattatttcaa 25644
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>gb|DQ017449.1| Drosophila melanogaster strain Russian 2b CG16963 gene, promoter
           region and partial cds
          Length = 1778

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 135 gtgaaattaaagaaaggaaattaaa 159
           ||||||| |||||||||||||||||
Sbjct: 199 gtgaaatgaaagaaaggaaattaaa 175
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>gb|DQ017448.1| Drosophila melanogaster strain Oregon R CG16963 gene, promoter
           region and partial cds
          Length = 1840

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 135 gtgaaattaaagaaaggaaattaaa 159
           ||||||| |||||||||||||||||
Sbjct: 199 gtgaaatgaaagaaaggaaattaaa 175
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>gb|AC011065.6| Drosophila melanogaster, chromosome 2L, region 33B-33B, BAC clone
             BACR37P12, complete sequence
          Length = 181103

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 135   gtgaaattaaagaaaggaaattaaa 159
             ||||||| |||||||||||||||||
Sbjct: 83616 gtgaaatgaaagaaaggaaattaaa 83592
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>gb|AE003634.2| Drosophila melanogaster chromosome 2L, section 43 of 83 of the complete
              sequence
          Length = 265341

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 135    gtgaaattaaagaaaggaaattaaa 159
              ||||||| |||||||||||||||||
Sbjct: 118385 gtgaaatgaaagaaaggaaattaaa 118361
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>gb|AC006240.1|AC006240 Drosophila melanogaster, chromosome 2L, region 33A3-33B2, P1 clones
             DS06189, DS04362, and DS07071, complete sequence
          Length = 170056

 Score = 42.1 bits (21), Expect = 0.50
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 135   gtgaaattaaagaaaggaaattaaa 159
             ||||||| |||||||||||||||||
Sbjct: 21393 gtgaaatgaaagaaaggaaattaaa 21417
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>gb|AC126942.4| Mus musculus BAC clone RP23-174P9 from chromosome 17, complete sequence
          Length = 182423

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 137   gaaattaaagaaaggaaattaaag 160
             |||| |||||||||||||||||||
Sbjct: 18067 gaaaataaagaaaggaaattaaag 18044
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>ref|XM_651272.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (13.t00024)
           partial mRNA
          Length = 342

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 136 tgaaattaaagaaaggaaattaaa 159
           |||||||||||||| |||||||||
Sbjct: 156 tgaaattaaagaaaagaaattaaa 179
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>ref|XM_652384.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (1.t00091)
           partial mRNA
          Length = 342

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 136 tgaaattaaagaaaggaaattaaa 159
           |||||||||||||| |||||||||
Sbjct: 156 tgaaattaaagaaaagaaattaaa 179
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>ref|XM_721148.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05738)
            partial mRNA
          Length = 1950

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 135  gtgaaattaaagaaaggaaa 154
            ||||||||||||||||||||
Sbjct: 1757 gtgaaattaaagaaaggaaa 1776
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>emb|BX324134.11| Zebrafish DNA sequence from clone DKEY-103K8 in linkage group 6, complete
              sequence
          Length = 219514

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      aagggaaaattatttcaaca 27
              ||||||||||||||||||||
Sbjct: 144356 aagggaaaattatttcaaca 144375
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>gb|AY118412.1| Drosophila melanogaster RE66446 full insert cDNA
          Length = 1603

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    aaaagggaaaattatttcaa 25
            ||||||||||||||||||||
Sbjct: 1559 aaaagggaaaattatttcaa 1540
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>gb|AC010574.5| Drosophila melanogaster 3L BAC RP98-7L7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 162402

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aaaagggaaaattatttcaa 25
             ||||||||||||||||||||
Sbjct: 63285 aaaagggaaaattatttcaa 63266
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>ref|NM_140520.1| Drosophila melanogaster CG7427-RA (CG7427), mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 6    aaaagggaaaattatttcaa 25
            ||||||||||||||||||||
Sbjct: 1559 aaaagggaaaattatttcaa 1540
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>gb|AC154218.2| Mus musculus BAC clone RP24-357N6 from chromosome 17, complete
            sequence
          Length = 122710

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 137  gaaattaaagaaaggaaattaaag 160
            |||| |||||||||||||||||||
Sbjct: 8062 gaaaataaagaaaggaaattaaag 8085
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>dbj|AK037423.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130017K18
           product:unclassifiable, full insert sequence
          Length = 2692

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 gaaattaaagaaaggaaattaaag 160
           |||| |||||||||||||||||||
Sbjct: 543 gaaaataaagaaaggaaattaaag 520
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>gb|AC027026.11| Homo sapiens chromosome 11, clone RP11-589F4, complete sequence
          Length = 155376

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 135  gtgaaattaaagaaaggaaattaa 158
            ||||||||||||| ||||||||||
Sbjct: 9801 gtgaaattaaagataggaaattaa 9824
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>emb|BX005477.7| Zebrafish DNA sequence from clone CH211-131K10 in linkage group 13,
              complete sequence
          Length = 169924

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 136    tgaaattaaagaaaggaaattaaa 159
              |||||||||| |||||||||||||
Sbjct: 139294 tgaaattaaataaaggaaattaaa 139317



 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 143    aaagaaaggaaattaaagg 161
              |||||||||||||||||||
Sbjct: 138948 aaagaaaggaaattaaagg 138966
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>gb|AE003530.3| Drosophila melanogaster chromosome 3L, section 55 of 83 of the complete
             sequence
          Length = 279152

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aaaagggaaaattatttcaa 25
             ||||||||||||||||||||
Sbjct: 76317 aaaagggaaaattatttcaa 76298
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>emb|BX293555.7| Mouse DNA sequence from clone RP23-202M10 on chromosome 2, complete
              sequence
          Length = 192154

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    gaaattaaagaaaggaaatt 156
              ||||||||||||||||||||
Sbjct: 161186 gaaattaaagaaaggaaatt 161167
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>dbj|AB009314.1| Streptococcus bovis gene for proton-translocating ATPase subunits,
            complete cds
          Length = 6759

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    aaagggaaaattatttcaac 26
            ||||||||||||||||||||
Sbjct: 3800 aaagggaaaattatttcaac 3819
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 133     ttgtgaaattaaagaaagg 151
               |||||||||||||||||||
Sbjct: 3149163 ttgtgaaattaaagaaagg 3149145
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 133     ttgtgaaattaaagaaagg 151
               |||||||||||||||||||
Sbjct: 3149336 ttgtgaaattaaagaaagg 3149318
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>gb|AC110567.10| Mus musculus chromosome 5, clone RP23-304I24, complete sequence
          Length = 188137

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 140    attaaagaaaggaaattaa 158
              |||||||||||||||||||
Sbjct: 172751 attaaagaaaggaaattaa 172733
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>gb|AC136518.3| Mus musculus BAC clone RP23-304K22 from chromosome 16, complete sequence
          Length = 206486

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 138    aaattaaagaaaggaaattaaag 160
              |||||||| ||||||||||||||
Sbjct: 149561 aaattaaataaaggaaattaaag 149539
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>gb|AC036145.11| Mus musculus chromosome 5, clone RP23-439C22, complete sequence
          Length = 182228

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 7      aaagggaaaattatttcaa 25
              |||||||||||||||||||
Sbjct: 111046 aaagggaaaattatttcaa 111064
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>gb|AC115948.12| Mus musculus chromosome 16, clone RP24-568J12, complete sequence
          Length = 212604

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 138   aaattaaagaaaggaaattaaag 160
             |||||||| ||||||||||||||
Sbjct: 17071 aaattaaataaaggaaattaaag 17049
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>gb|AC142271.3| Mus musculus chromosome 5 clone RP24-69A21, complete sequence
          Length = 179941

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 140    attaaagaaaggaaattaa 158
              |||||||||||||||||||
Sbjct: 150642 attaaagaaaggaaattaa 150660
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>gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosome 1, complete sequence
          Length = 197488

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 138   aaattaaagaaaggaaattaaag 160
             |||||||||||||||||| ||||
Sbjct: 16653 aaattaaagaaaggaaatgaaag 16631
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>gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosome 1, complete sequence
          Length = 167597

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 134    tgtgaaattaaagaaaggaaattaaag 160
              ||||||| |||||||||||| ||||||
Sbjct: 150718 tgtgaaaataaagaaaggaagttaaag 150744
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>gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete sequence
          Length = 226443

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 138   aaattaaagaaaggaaattaaag 160
             |||||||||||||||||| ||||
Sbjct: 58733 aaattaaagaaaggaaatgaaag 58755
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>gb|AC098743.3| Mus musculus BAC clone RP23-122O4 from 1, complete sequence
          Length = 225868

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 134   tgtgaaattaaagaaaggaaattaaag 160
             ||||||| |||||||||||| ||||||
Sbjct: 64148 tgtgaaaataaagaaaggaagttaaag 64174
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>ref|XM_648464.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (79.t00022)
            partial mRNA
          Length = 5733

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 133  ttgtgaaattaaagaaagg 151
            |||||||||||||||||||
Sbjct: 2241 ttgtgaaattaaagaaagg 2259
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>gb|AC118755.7| Homo sapiens chromosome 17, clone RP11-55L4, complete sequence
          Length = 188765

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 137    gaaattaaagaaaggaaat 155
              |||||||||||||||||||
Sbjct: 127721 gaaattaaagaaaggaaat 127703
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>gb|AC007091.3| Homo sapiens BAC clone RP11-71F18 from 7, complete sequence
          Length = 174327

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     aaaaagggaaaattatttc 23
             |||||||||||||||||||
Sbjct: 22374 aaaaagggaaaattatttc 22392
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>ref|XM_674056.1| Plasmodium berghei strain ANKA hypothetical protein (PB000472.03.0)
           partial mRNA
          Length = 717

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 136 tgaaattaaagaaaggaaa 154
           |||||||||||||||||||
Sbjct: 306 tgaaattaaagaaaggaaa 324
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>gb|AC152158.10| Medicago truncatula clone mth2-139g10, complete sequence
          Length = 140874

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     caaaaagggaaaattattt 22
             |||||||||||||||||||
Sbjct: 72497 caaaaagggaaaattattt 72515
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>gb|AC146590.25| Medicago truncatula clone mth2-145p10, complete sequence
          Length = 130834

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 138   aaattaaagaaaggaaattaaag 160
             ||||||||||||| |||||||||
Sbjct: 74591 aaattaaagaaagcaaattaaag 74569
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>emb|AL356794.10| Human DNA sequence from clone RP11-551A11 on chromosome 6 Contains a
            ribosomal protein S3A (40S ribosomal protein S3a, v-fos
            transformation effector protein 1) (RPS3A)(FTE1)
            pseudogene, complete sequence
          Length = 164439

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 142  taaagaaaggaaattaaag 160
            |||||||||||||||||||
Sbjct: 3087 taaagaaaggaaattaaag 3069
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>emb|AL032822.1|HS59B16 Human DNA sequence from clone RP1-59B16 on chromosome 6p22.1-22.3
             Contains an exonuclease FLJ12671 pseudogene, complete
             sequence
          Length = 99902

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     caaaaagggaaaattattt 22
             |||||||||||||||||||
Sbjct: 59932 caaaaagggaaaattattt 59914
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>emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete
            sequence; segment 3/4
          Length = 349402

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 13   aaaattatttcaacagtaa 31
            |||||||||||||||||||
Sbjct: 8485 aaaattatttcaacagtaa 8503
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>emb|BX470243.12| Zebrafish DNA sequence from clone CH211-79J19 in linkage group 16,
              complete sequence
          Length = 191645

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 13     aaaattatttcaacagtaa 31
              |||||||||||||||||||
Sbjct: 152451 aaaattatttcaacagtaa 152469
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>emb|CR749537.1| Homo sapiens mRNA; cDNA DKFZp686I15206 (from clone DKFZp686I15206)
          Length = 3566

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 143  aaagaaaggaaattaaagg 161
            |||||||||||||||||||
Sbjct: 2573 aaagaaaggaaattaaagg 2591
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>gb|AC153626.5| Mus musculus 6 BAC RP23-245J24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190365

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 141    ttaaagaaaggaaattaaa 159
              |||||||||||||||||||
Sbjct: 121131 ttaaagaaaggaaattaaa 121113
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>gb|AC149877.2| Xenopus tropicalis clone CH216-23F19, complete sequence
          Length = 176807

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    aaaattatttcaacagtaa 31
             |||||||||||||||||||
Sbjct: 34159 aaaattatttcaacagtaa 34141
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 139      aattaaagaaaggaaatta 157
                |||||||||||||||||||
Sbjct: 14999593 aattaaagaaaggaaatta 14999575
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 140     attaaagaaaggaaattaa 158
               |||||||||||||||||||
Sbjct: 4887299 attaaagaaaggaaattaa 4887317
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>gb|AC080165.6| Homo sapiens BAC clone RP11-747L21 from 2, complete sequence
          Length = 63279

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     caaaaagggaaaattattt 22
             |||||||||||||||||||
Sbjct: 20653 caaaaagggaaaattattt 20671
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>gb|AC157525.2| Pan troglodytes BAC clone CH251-519D18 from chromosome unknown,
             complete sequence
          Length = 234137

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 139   aattaaagaaaggaaatta 157
             |||||||||||||||||||
Sbjct: 37617 aattaaagaaaggaaatta 37599
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>gb|AC148307.3| Pan troglodytes BAC clone RP43-44G20 from chromosome 11, complete
              sequence
          Length = 199161

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 143    aaagaaaggaaattaaagg 161
              |||||||||||||||||||
Sbjct: 186661 aaagaaaggaaattaaagg 186679
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>gb|AC010093.8| Homo sapiens BAC clone RP11-323O5 from 2, complete sequence
          Length = 160930

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     aaaaagggaaaattatttc 23
             |||||||||||||||||||
Sbjct: 70887 aaaaagggaaaattatttc 70905
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>gb|AC005520.2|AC005520 Homo sapiens PAC clone RP5-1021I20 from 14q24.3, complete sequence
          Length = 151123

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 143  aaagaaaggaaattaaagg 161
            |||||||||||||||||||
Sbjct: 1197 aaagaaaggaaattaaagg 1215
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>gb|AC087501.16| Homo sapiens chromosome 17, clone RP11-565F19, complete sequence
          Length = 192197

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 137    gaaattaaagaaaggaaat 155
              |||||||||||||||||||
Sbjct: 101815 gaaattaaagaaaggaaat 101797
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>gb|AC079753.7| Homo sapiens BAC clone RP11-67L14 from 2, complete sequence
          Length = 154214

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     ccaaaaagggaaaattatt 21
             |||||||||||||||||||
Sbjct: 66962 ccaaaaagggaaaattatt 66944
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>dbj|AP005173.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0003E08
          Length = 161095

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 140   attaaagaaaggaaattaa 158
             |||||||||||||||||||
Sbjct: 72783 attaaagaaaggaaattaa 72801
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>dbj|AP005866.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0076O03
          Length = 140823

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 139    aattaaagaaaggaaatta 157
              |||||||||||||||||||
Sbjct: 132122 aattaaagaaaggaaatta 132104
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>gb|AC004908.1|AC004908 Homo sapiens PAC clone RP5-855D21, complete sequence
          Length = 138251

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 143   aaagaaaggaaattaaagg 161
             |||||||||||||||||||
Sbjct: 63613 aaagaaaggaaattaaagg 63595
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>tpe|BN000002.1|HSA000002 TPA: TPA_exp: Homo sapiens complete interleukin-1 gene cluster (Draft
              Contig) including IL1A (IL1F1), IL1B (IL1F2), IL1RN
              (IL1F3), IL1F5, IL1F6, IL1F7, IL1F8, IL1F9, IL1F10
          Length = 495475

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 3      ccaaaaagggaaaattatt 21
              |||||||||||||||||||
Sbjct: 143087 ccaaaaagggaaaattatt 143069
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>gb|AC006249.1|AC006249 Homo sapiens chromosome 18, clone hRPK.430_E_17, complete sequence
          Length = 197082

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 139    aattaaagaaaggaaatta 157
              |||||||||||||||||||
Sbjct: 183857 aattaaagaaaggaaatta 183875
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>gb|AC108440.8| Mus musculus chromosome 19, clone RP23-379H7, complete sequence
          Length = 177196

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     caaaaagggaaaattattt 22
             |||||||||||||||||||
Sbjct: 64638 caaaaagggaaaattattt 64656
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>gb|AC134825.5| Mus musculus BAC clone RP24-456L17 from 9, complete sequence
          Length = 173663

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 142   taaagaaaggaaattaaag 160
             |||||||||||||||||||
Sbjct: 93753 taaagaaaggaaattaaag 93735
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>gb|AC004045.1|AC004045 Homo sapiens chromosome 4 clone B139M23 map 4q25, complete sequence
          Length = 106346

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     aaaagggaaaattatttca 24
             |||||||||||||||||||
Sbjct: 58320 aaaagggaaaattatttca 58338
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>dbj|AP006632.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT16I03, TM0056,
             complete sequence
          Length = 102883

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 138   aaattaaagaaaggaaatt 156
             |||||||||||||||||||
Sbjct: 63605 aaattaaagaaaggaaatt 63587
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>gb|AC171728.1| Lycopersicon esculentum chromosome 01 clone C01HBa0216G16, complete
              sequence
          Length = 196870

 Score = 38.2 bits (19), Expect = 7.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      aaaagggaaaattatttca 24
              |||||||||||||||||||
Sbjct: 149976 aaaagggaaaattatttca 149994


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,804,831
Number of Sequences: 3902068
Number of extensions: 1804831
Number of successful extensions: 144385
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144037
Number of HSP's gapped (non-prelim): 348
length of query: 161
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 139
effective length of database: 17,147,199,772
effective search space: 2383460768308
effective search space used: 2383460768308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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