>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                         
Query: 164   tcatcaagttctgttgaaagactgctgtccaaacgatgggggttgtgtaggaggaggtgg 223
             ||||||||||||| | ||||  |||||||||   || ||||| |||||||| ||||||||
Sbjct: 68039 tcatcaagttctgctaaaagtttgctgtccagctgaagggggctgtgtagggggaggtgg 68098

                                      
Query: 224   ggggagcgacatctgcatttgcatc 248
             ||| || ||||||||||||||||||
Sbjct: 68099 gggaagtgacatctgcatttgcatc 68123



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                         
Query: 308   atccctaccttgcatgcctgggttcatcgagccgtcaggcatcatcccgaaaccagctgg 367
             |||||||||| | |||||||  ||||| ||||| |||||||| |  ||||||||| || |
Sbjct: 68171 atccctacctggtatgcctgaattcattgagccatcaggcatgactccgaaaccaccttg 68230

                                          
Query: 368   catgaaggccatgccgccacctccttgag 396
             || |||  |||| ||||||||||| ||||
Sbjct: 68231 caggaaaaccattccgccacctccctgag 68259

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                            
Query: 164      tcatcaagttctgttgaaagactgctgtccaaacgatgggggttgtgtaggaggaggtgg 223
                ||||||||||||| | ||||  |||||||||   || ||||| |||||||| ||||||||
Sbjct: 18282731 tcatcaagttctgctaaaagtttgctgtccagctgaagggggctgtgtagggggaggtgg 18282672

                                         
Query: 224      ggggagcgacatctgcatttgcatc 248
                ||| || ||||||||||||||||||
Sbjct: 18282671 gggaagtgacatctgcatttgcatc 18282647



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                            
Query: 308      atccctaccttgcatgcctgggttcatcgagccgtcaggcatcatcccgaaaccagctgg 367
                |||||||||| | |||||||  ||||| ||||| |||||||| |  ||||||||| || |
Sbjct: 18282599 atccctacctggtatgcctgaattcattgagccatcaggcatgactccgaaaccaccttg 18282540

                                             
Query: 368      catgaaggccatgccgccacctccttgag 396
                || |||  |||| ||||||||||| ||||
Sbjct: 18282539 caggaaaaccattccgccacctccctgag 18282511

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                            
Query: 164      tcatcaagttctgttgaaagactgctgtccaaacgatgggggttgtgtaggaggaggtgg 223
                ||||||||||||| | ||||  |||||||||   || ||||| |||||||| ||||||||
Sbjct: 18292384 tcatcaagttctgctaaaagtttgctgtccagctgaagggggctgtgtagggggaggtgg 18292325

                                         
Query: 224      ggggagcgacatctgcatttgcatc 248
                ||| || ||||||||||||||||||
Sbjct: 18292324 gggaagtgacatctgcatttgcatc 18292300



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                            
Query: 308      atccctaccttgcatgcctgggttcatcgagccgtcaggcatcatcccgaaaccagctgg 367
                |||||||||| | |||||||  ||||| ||||| |||||||| |  ||||||||| || |
Sbjct: 18292252 atccctacctggtatgcctgaattcattgagccatcaggcatgactccgaaaccaccttg 18292193

                                             
Query: 368      catgaaggccatgccgccacctccttgag 396
                || |||  |||| ||||||||||| ||||
Sbjct: 18292192 caggaaaaccattccgccacctccctgag 18292164

>ref|NM_197151.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBa0041P03.16), mRNA
          Length = 1509

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                        
Query: 167  tcaagttctgttgaaagactgctgtccaaacgatgggggttgtgtaggaggaggtggggg 226
            |||||||||| | ||||  |||||||||   || ||||| |||||||| |||||||||||
Sbjct: 1509 tcaagttctgctaaaagtttgctgtccagctgaagggggctgtgtagggggaggtggggg 1450

                                  
Query: 227  gagcgacatctgcatttgcatc 248
             || ||||||||||||||||||
Sbjct: 1449 aagtgacatctgcatttgcatc 1428



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                        
Query: 308  atccctaccttgcatgcctgggttcatcgagccgtcaggcatcatcccgaaaccagctgg 367
            |||||||||| | |||||||  ||||| ||||| |||||||| |  ||||||||| || |
Sbjct: 1380 atccctacctggtatgcctgaattcattgagccatcaggcatgactccgaaaccaccttg 1321

                                         
Query: 368  catgaaggccatgccgccacctccttgag 396
            || |||  |||| ||||||||||| ||||
Sbjct: 1320 caggaaaaccattccgccacctccctgag 1292

>gb|BT017116.1| Zea mays clone EL01N0364B06.c mRNA sequence
          Length = 1105

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 198 gatgggggttgtgtaggaggaggtggggggagcgacatctgcatttgcat 247
           ||||| ||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 762 gatggaggttgtgtaggcggaggtgggggaagtgacatctgcatttgcat 713

>gb|BT019103.1| Zea mays clone Contig704.F mRNA sequence
          Length = 937

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 204 ggttgtgtaggaggaggtggggggagcgacatctgcatttgcat 247
           ||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 676 ggttgtgtaggcggaggtgggggaagtgacatctgcatttgcat 633

>dbj|AB022216.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGD8
          Length = 80167

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 232   acatctgcatttgcatcacca 252
             |||||||||||||||||||||
Sbjct: 19515 acatctgcatttgcatcacca 19495

>ref|XM_640249.1| Dictyostelium discoideum hypothetical protein (DDB0203653), partial
            mRNA
          Length = 1914

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  tcaccataggtaactgttct 266
            ||||||||||||||||||||
Sbjct: 1508 tcaccataggtaactgttct 1489

>gb|AC183598.2| Pan troglodytes BAC clone CH251-455P14 from chromosome 7, complete
              sequence
          Length = 216847

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 371    gaaggccatgccgccacctccttgagaa 398
              |||||||||||| ||||||||| |||||
Sbjct: 213371 gaaggccatgcctccacctcctggagaa 213398

>gb|BC109865.1| Bos taurus MBD2-interacting zinc finger, mRNA (cDNA clone
           MGC:133877 IMAGE:8041103), complete cds
          Length = 2161

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 370 tgaaggccatgccgccacct 389
           ||||||||||||||||||||
Sbjct: 23  tgaaggccatgccgccacct 42

>gb|AC004905.2| Homo sapiens PAC clone RP5-845I21 from 7, complete sequence
          Length = 134350

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 371   gaaggccatgccgccacctccttgagaa 398
             |||||||||||| ||||||||| |||||
Sbjct: 70898 gaaggccatgcctccacctcctggagaa 70925

>ref|NM_001038531.1| Bos taurus MBD2-interacting zinc finger (MIZF), mRNA
          Length = 2161

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 370 tgaaggccatgccgccacct 389
           ||||||||||||||||||||
Sbjct: 23  tgaaggccatgccgccacct 42

>emb|Z84470.1|HS411B6 Human DNA sequence from clone RP3-411B6 on chromosome X, complete
              sequence
          Length = 149526

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    cttggccttggaaatcccta 314
              ||||||||||||||||||||
Sbjct: 134595 cttggccttggaaatcccta 134614

>emb|AL591475.9| Human DNA sequence from clone RP11-314C16 on chromosome 6 Contains a
             novel gene and a CpG island, complete sequence
          Length = 48654

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   tgtaggaggaggtgggggga 228
             ||||||||||||||||||||
Sbjct: 38266 tgtaggaggaggtgggggga 38285

>emb|AL390115.18| Human DNA sequence from clone RP11-479J7 on chromosome 1 Contains a
             novel gene and the 3' end of a novel gene, complete
             sequence
          Length = 102533

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   cagccacaaaattggcatgc 155
             ||||||||||||||||||||
Sbjct: 51660 cagccacaaaattggcatgc 51641

>gb|BC102369.1| Bos taurus mitochondrial ribosomal protein L16, mRNA (cDNA clone
           MGC:127303 IMAGE:7950233), complete cds
          Length = 1009

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  tgccaagatggcaaaattgc 101
           ||||||||||||||||||||
Sbjct: 332 tgccaagatggcaaaattgc 313

>gb|AC115599.2| Dictyostelium discoideum chromosome 2 map 4229098-4354721 strain AX4,
            complete sequence
          Length = 125623

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  tcaccataggtaactgttct 266
            ||||||||||||||||||||
Sbjct: 5760 tcaccataggtaactgttct 5779

>gb|DQ273587.1| Flaveria pringlei carbonic anhydrase 3 mRNA, complete cds
          Length = 1160

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 cgattttggcagcagccaca 143
           ||||||||||||||||||||
Sbjct: 339 cgattttggcagcagccaca 320

>emb|CR376779.18| Zebrafish DNA sequence from clone CH211-236N18 in linkage group 7,
             complete sequence
          Length = 177160

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   ttcccaacgcagtacagcac 124
             ||||||||||||||||||||
Sbjct: 96450 ttcccaacgcagtacagcac 96469

>ref|NM_001034641.1| Bos taurus mitochondrial ribosomal protein L16 (MRPL16), mRNA
          Length = 1009

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  tgccaagatggcaaaattgc 101
           ||||||||||||||||||||
Sbjct: 332 tgccaagatggcaaaattgc 313


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,187,577
Number of Sequences: 3902068
Number of extensions: 3187577
Number of successful extensions: 58171
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58097
Number of HSP's gapped (non-prelim): 74
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)