>TRUB_XANCP (Q8P7U9) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 308

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 315 CLSYLTDLQ*AWCDPFETTQRPELIIIYAATSVTEAG 425
           C +++  L+  W +PF T   PE+I + A T++ E+G
Sbjct: 193 CGAHIAALRRVWVEPFRT---PEMITLEALTALVESG 226

>TRUB_XANC8 (Q4UWA0) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 308

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +3

Query: 315 CLSYLTDLQ*AWCDPFETTQRPELIIIYAATSVTEAG 425
           C +++  L+  W +PF T   PE+I + A T++ E+G
Sbjct: 193 CGAHIAALRRVWVEPFRT---PEMITLEALTALVESG 226

>ASIP_VULVU (P79407) Agouti signaling protein precursor (ASP) (Agouti switch|
           protein)
          Length = 131

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -3

Query: 323 TQTTCKSSPLR*CCEQPSNHQKRLFSLVCTI*VACRLL*PS 201
           T+ +CKS P   CC+  ++ Q R F   CT    CR+L PS
Sbjct: 95  TRNSCKS-PAPACCDPCASCQCRFFRSACT----CRVLSPS 130


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,396,804
Number of Sequences: 219361
Number of extensions: 1070295
Number of successful extensions: 2072
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2072
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)