>ref|XM_483028.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 948

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                       
Query: 331 gcgggcctccgtctccttccagccccgctcaatctcccactgtacctccattctccgcct 390
           ||||||||| || |||||||| || || || ||||||||||| | |||||| | ||||||
Sbjct: 840 gcgggcctcggtttccttccacccacgatcgatctcccactgcatctccatgcgccgcct 781

                                                  
Query: 391 ctccagccgcttgattccctcgccgatgtccctcagcac 429
           ||| |||||| |||| |||| |||||  ||||| |||||
Sbjct: 780 ctcgagccgcatgatcccctggccgaaatcccttagcac 742

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                            
Query: 331      gcgggcctccgtctccttccagccccgctcaatctcccactgtacctccattctccgcct 390
                ||||||||| || |||||||| || || || ||||||||||| | |||||| | ||||||
Sbjct: 23945365 gcgggcctcggtttccttccacccacgatcgatctcccactgcatctccatgcgccgcct 23945306

                                                       
Query: 391      ctccagccgcttgattccctcgccgatgtccctcagcac 429
                ||| |||||| |||| |||| |||||  ||||| |||||
Sbjct: 23945305 ctcgagccgcatgatcccctggccgaaatcccttagcac 23945267

>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0419H09
          Length = 143533

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                         
Query: 331   gcgggcctccgtctccttccagccccgctcaatctcccactgtacctccattctccgcct 390
             ||||||||| || |||||||| || || || ||||||||||| | |||||| | ||||||
Sbjct: 78516 gcgggcctcggtttccttccacccacgatcgatctcccactgcatctccatgcgccgcct 78457

                                                    
Query: 391   ctccagccgcttgattccctcgccgatgtccctcagcac 429
             ||| |||||| |||| |||| |||||  ||||| |||||
Sbjct: 78456 ctcgagccgcatgatcccctggccgaaatcccttagcac 78418

>gb|BT024003.1| Zea mays clone EL01N0404E11 mRNA sequence
          Length = 1184

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 331 gcgggcctccgtctccttccagccccgctcaatctcccactgtacctccattctccgcct 390
           |||||| |||| ||||| ||| || ||||| ||||||||||| |||||||| | ||||| 
Sbjct: 891 gcgggcgtccgcctcctgccacccgcgctcgatctcccactgcacctccatgcgccgccg 832

                                              
Query: 391 ctccagccgcttgattccctcgccgatgtccctca 425
           |||||||||| |||  |||| |||||  |||||||
Sbjct: 831 ctccagccgcatgacaccctggccgaaatccctca 797

>gb|AC090046.10| Mus musculus chromosome 6, clone RP23-82P24, complete sequence
          Length = 179099

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 124    tgcctcccttcactaccaccaga 146
              |||||||||||||||||||||||
Sbjct: 161751 tgcctcccttcactaccaccaga 161729

>gb|AC113985.11| Mus musculus chromosome 6, clone RP24-103E20, complete sequence
          Length = 169187

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 124    tgcctcccttcactaccaccaga 146
              |||||||||||||||||||||||
Sbjct: 124734 tgcctcccttcactaccaccaga 124756

>emb|BX510912.4| Zebrafish DNA sequence from clone CH211-18J22 in linkage group 3,
             complete sequence
          Length = 189210

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 43    caacaatggtcagaatggttca 64
             ||||||||||||||||||||||
Sbjct: 81493 caacaatggtcagaatggttca 81472

>gb|AC116953.5| Mus musculus BAC clone RP23-119H17 from chromosome 7, complete sequence
          Length = 193506

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    taaatacatacatcctgagta 95
             |||||||||||||||||||||
Sbjct: 90699 taaatacatacatcctgagta 90679

>gb|AC122191.4| Mus musculus BAC clone RP23-42J4 from 6, complete sequence
          Length = 250147

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   accagataataagaaaaataa 161
             |||||||||||||||||||||
Sbjct: 97244 accagataataagaaaaataa 97224

>gb|AC105268.2| Homo sapiens chromosome 1 clone RP5-1107G8, complete sequence
          Length = 148970

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 144    agataataagaaaaataaaca 164
              |||||||||||||||||||||
Sbjct: 105281 agataataagaaaaataaaca 105261

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 263     gccagcggcggcagggcggcg 283
               |||||||||||||||||||||
Sbjct: 4192278 gccagcggcggcagggcggcg 4192258

>gb|AC084783.2|AC084783 Homo sapiens chromosome 15 clone RP11-5N19 map 15q21.3, complete sequence
          Length = 166982

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 151    aagaaaaataaacagcttcaa 171
              |||||||||||||||||||||
Sbjct: 140401 aagaaaaataaacagcttcaa 140421

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 278    gcggcgagggcgtcatgtaactgccgctg 306
              ||||||||||||||| | |||||||||||
Sbjct: 221937 gcggcgagggcgtcagggaactgccgctg 221965

>gb|AC148326.2| Mus musculus BAC clone RP24-377D18 from 6, complete sequence
          Length = 177503

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   accagataataagaaaaataa 161
             |||||||||||||||||||||
Sbjct: 17412 accagataataagaaaaataa 17432

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 264     ccagcggcggcagggcggcg 283
               ||||||||||||||||||||
Sbjct: 2312326 ccagcggcggcagggcggcg 2312307

>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence
          Length = 182190

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    aagactaggaacaatctctt 122
              ||||||||||||||||||||
Sbjct: 160763 aagactaggaacaatctctt 160782

>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 104     agactaggaacaatctcttttgcc 127
               |||||| |||||||||||||||||
Sbjct: 1353604 agactatgaacaatctcttttgcc 1353581

>ref|XM_416415.1| PREDICTED: Gallus gallus similar to AE binding protein 2;
            AE(adipocyte enhancer)-binding protein 2 (LOC418184),
            mRNA
          Length = 1523

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 357  gctcaatctcccactgtacc 376
            ||||||||||||||||||||
Sbjct: 1185 gctcaatctcccactgtacc 1166

>ref|XM_960222.1| Neurospora crassa OR74A hypothetical protein (NCU03215.1) partial
            mRNA
          Length = 1917

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 457  cggagcctcttcagccttgatcct 480
            ||||||||||||||| ||||||||
Sbjct: 1051 cggagcctcttcagcgttgatcct 1074

>ref|XM_330650.1| Neurospora crassa OR74A hypothetical protein (NCU03215.1) partial
            mRNA
          Length = 1917

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 457  cggagcctcttcagccttgatcct 480
            ||||||||||||||| ||||||||
Sbjct: 1051 cggagcctcttcagcgttgatcct 1074

>emb|AL353790.15| Human DNA sequence from clone RP11-337N19 on chromosome 10 Contains an
              S-adenosylmethionine decarboxylase proenzyme (AdoMetDC)
              (SamDC) pseudogene, complete sequence
          Length = 119555

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    ataataagaaaaataaacag 165
              ||||||||||||||||||||
Sbjct: 111639 ataataagaaaaataaacag 111658

>gb|AE008892.1| Salmonella typhimurium LT2, section 196 of 220 of the complete genome
          Length = 20385

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   ttagccagcggcggcagggc 279
             ||||||||||||||||||||
Sbjct: 11817 ttagccagcggcggcagggc 11836

>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete sequence
          Length = 204620

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   aagactaggaacaatctctt 122
             ||||||||||||||||||||
Sbjct: 54118 aagactaggaacaatctctt 54137

>gb|AC163902.2| Mus musculus BAC clone RP23-479B18 from chromosome 17, complete
             sequence
          Length = 190411

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   agaaaaataaacagcttcaa 171
             ||||||||||||||||||||
Sbjct: 45076 agaaaaataaacagcttcaa 45057

>emb|AL627279.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
              complete chromosome; segment 15/20
          Length = 264050

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    ttagccagcggcggcagggc 279
              ||||||||||||||||||||
Sbjct: 152828 ttagccagcggcggcagggc 152809

>gb|AC079441.37| Mus musculus strain C57BL/6J clone rp23-349b16 map 17, complete
             sequence
          Length = 223005

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   agaaaaataaacagcttcaa 171
             ||||||||||||||||||||
Sbjct: 38031 agaaaaataaacagcttcaa 38050

>gb|AC079015.8| Homo sapiens chromosome 8, clone RP11-489O18, complete sequence
          Length = 157122

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    cagataataagaaaaataaa 162
              ||||||||||||||||||||
Sbjct: 142244 cagataataagaaaaataaa 142225

>gb|AC046195.9| Homo sapiens chromosome 8, clone RP11-238K6, complete sequence
          Length = 161507

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    cagataataagaaaaataaa 162
              ||||||||||||||||||||
Sbjct: 161395 cagataataagaaaaataaa 161414

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 319     catctgattattgcgggcct 338
               ||||||||||||||||||||
Sbjct: 1309372 catctgattattgcgggcct 1309391

>emb|CR338903.2| Gallus gallus finished cDNA, clone ChEST984e13
          Length = 1997

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  gctcaatctcccactgtacc 376
            ||||||||||||||||||||
Sbjct: 1835 gctcaatctcccactgtacc 1854

>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 260     ttagccagcggcggcagggc 279
               ||||||||||||||||||||
Sbjct: 4108113 ttagccagcggcggcagggc 4108132

>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete
             sequence
          Length = 156508

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   cttttgcctcccttcactac 139
             ||||||||||||||||||||
Sbjct: 65773 cttttgcctcccttcactac 65792

>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 260     ttagccagcggcggcagggc 279
               ||||||||||||||||||||
Sbjct: 3602488 ttagccagcggcggcagggc 3602469

>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
               complete genome
          Length = 4755700

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 260     ttagccagcggcggcagggc 279
               ||||||||||||||||||||
Sbjct: 4268730 ttagccagcggcggcagggc 4268749

>emb|CT025871.10| Mouse DNA sequence from clone RP24-324L15 on chromosome 17, complete
             sequence
          Length = 154761

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   agaaaaataaacagcttcaa 171
             ||||||||||||||||||||
Sbjct: 83872 agaaaaataaacagcttcaa 83853


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,133,113
Number of Sequences: 3902068
Number of extensions: 4133113
Number of successful extensions: 90732
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90302
Number of HSP's gapped (non-prelim): 430
length of query: 497
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 475
effective length of database: 17,147,199,772
effective search space: 8144919891700
effective search space used: 8144919891700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)