ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast73h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SAPK5_ORYSA (Q7XKA8) Serine/threonine-protein kinase SAPK5 (EC 2... 44 8e-05
2IGF1R_RAT (P24062) Insulin-like growth factor 1 receptor precurs... 30 1.5
3IGF1R_MOUSE (Q60751) Insulin-like growth factor 1 receptor precu... 30 1.5

>SAPK5_ORYSA (Q7XKA8) Serine/threonine-protein kinase SAPK5 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           5)
          Length = 370

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 26/55 (47%), Positives = 28/55 (50%)
 Frame = -2

Query: 328 KPDKPVTGYGWGTGDGEASXXXXXXXXXXXXXXXXXXXXDRTVREVHASGDFGMS 164
           KPDKPV+GYGWGT D +                      DRTVREVHAS D  MS
Sbjct: 318 KPDKPVSGYGWGTDDDD-------DDQQPAEEEDEEDDYDRTVREVHASVDLDMS 365



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>IGF1R_RAT (P24062) Insulin-like growth factor 1 receptor precursor (EC|
           2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I
           receptor) [Contains: Insulin-like growth factor 1
           receptor alpha chain; Insulin-like growth factor 1
           receptor beta chain]
          Length = 1370

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 89  WTRNDVGEQWPAPCGEKQLTSDLELAHAEVSAGVHLP 199
           WT N   +  P+ CG++  T + E  H E     H P
Sbjct: 206 WTTNRCQKMCPSVCGKRACTENNECCHPECLGSCHTP 242



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>IGF1R_MOUSE (Q60751) Insulin-like growth factor 1 receptor precursor (EC|
           2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I
           receptor) [Contains: Insulin-like growth factor 1
           receptor alpha chain; Insulin-like growth factor 1
           receptor beta chain]
          Length = 1373

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 89  WTRNDVGEQWPAPCGEKQLTSDLELAHAEVSAGVHLP 199
           WT N   +  P+ CG++  T + E  H E     H P
Sbjct: 206 WTTNRCQKMCPSVCGKRACTENNECCHPECLGSCHTP 242


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,171,491
Number of Sequences: 219361
Number of extensions: 382207
Number of successful extensions: 987
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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