ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast73g12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SCRK2_ORYSA (Q944F5) Fructokinase-2 (EC 2.7.1.4) (Fructokinase I... 35 0.061
2SCRK2_MAIZE (Q6XZ78) Fructokinase-2 (EC 2.7.1.4) (ZmFRK2) 30 1.2

>SCRK2_ORYSA (Q944F5) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII)|
          Length = 336

 Score = 34.7 bits (78), Expect = 0.061
 Identities = 17/29 (58%), Positives = 18/29 (62%)
 Frame = -2

Query: 329 GAICTTKKGAIXXXXXXXXXLELISKGSN 243
           GAICTTKKGAI          ELISK +N
Sbjct: 308 GAICTTKKGAIPALPTVAVAQELISKAAN 336



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>SCRK2_MAIZE (Q6XZ78) Fructokinase-2 (EC 2.7.1.4) (ZmFRK2)|
          Length = 335

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 329 GAICTTKKGAIXXXXXXXXXLELISKGS 246
           GAICTTKKGAI          +LI+K +
Sbjct: 308 GAICTTKKGAIPALPTVATAQDLIAKAN 335


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,116,085
Number of Sequences: 219361
Number of extensions: 513615
Number of successful extensions: 906
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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