>TSC1_HUMAN (Q92574) Hamartin (Tuberous sclerosis 1 protein)|
          Length = 1164

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 345 SDESQAGCSQRRITADTGIFQPSACKI 265
           +DES AG  + + + +T IF PS CKI
Sbjct: 562 ADESPAGDRECQTSLETSIFTPSPCKI 588

>MSN2_YEAST (P33748) Zinc finger protein MSN2 (Multicopy suppressor of SNF1|
           protein 2)
          Length = 704

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 52  HPNIREEALHDLQKSFSQNKNFHMHIQVKKPKHG 153
           H N R  A H   K FS++ N   HI+  K KHG
Sbjct: 670 HSNERPFACHICDKKFSRSDNLSQHIKTHK-KHG 702

>CAUP_DROME (P54269) Homeobox protein caupolican|
          Length = 693

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 22  SYCSSTTTAEHPNIREEALHDLQKSFSQNKNFHMHIQVKKPKHGTPPDKYHKEE 183
           SY  S  T  HP+ ++   H  Q+   QN+    H Q+ +P +   P  Y +EE
Sbjct: 385 SYAQSHNTHTHPHPQQMQHHQQQQQQQQNQQQLQHHQMDQPYY--HPGGYGQEE 436

>IL16_SAISC (O62677) Interleukin-16 precursor (IL-16) (Lymphocyte|
           chemoattractant factor) (LCF)
          Length = 627

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -3

Query: 413 VTRNPPAGRSGVERTLREKKPSALMKVRPGARRGASQPILAFFSQARAKF 264
           V+ +PP GR   E+TL    P  L+++ P     +  P+L   SQ    F
Sbjct: 214 VSESPPPGRQPSEKTL-PPSPDPLLRLLPTQTEESQGPVLKMPSQRARSF 262

>SILP_SALTY (Q9ZHC7) Putative cation-transporting P-type ATPase (EC 3.6.3.-)|
          Length = 824

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
 Frame = +1

Query: 16  ELSYCSSTTTAE---HPNIREEALHDLQKSFSQNKNFHMHIQVKKPKHGTPPDKY---HK 177
           +L +CS++  ++   HP+      H   +  S++ + H H       H   PDK    H+
Sbjct: 65  QLYFCSASCESKFKAHPD------HYFTEDASEHHHHHDH-------HEVSPDKIKQSHR 111

Query: 178 EEEKTIFLNVHTCQPA*NNLRQGPKNQP 261
           + EK I   V TC       R GP + P
Sbjct: 112 QAEKEISEGVWTCPMHPEIRRSGPGSCP 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,031,408
Number of Sequences: 219361
Number of extensions: 1254011
Number of successful extensions: 3261
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3259
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)