>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 275

 Score =  104 bits (260), Expect = 4e-23
 Identities = 50/67 (74%), Positives = 57/67 (85%)
 Frame = -2

Query: 391 ENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVEKSPKFG 212
           ENT T+GTQH LDPLTT+KGR  N G ASALIQH WRPKS+IT S+EVDTKA+EKS K G
Sbjct: 209 ENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKSAKIG 268

Query: 211 LALSLKP 191
           L+L+LKP
Sbjct: 269 LSLALKP 275

>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 34)
          Length = 275

 Score =  103 bits (256), Expect = 1e-22
 Identities = 49/67 (73%), Positives = 56/67 (83%)
 Frame = -2

Query: 391 ENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVEKSPKFG 212
           EN ITVGTQH LDPLT++K R NNFG ASAL+QH WRPKS+ T S EVDTK+V+K  KFG
Sbjct: 209 ENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDKGAKFG 268

Query: 211 LALSLKP 191
           LAL+LKP
Sbjct: 269 LALALKP 275

>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 36)
          Length = 275

 Score =  101 bits (252), Expect = 4e-22
 Identities = 47/67 (70%), Positives = 57/67 (85%)
 Frame = -2

Query: 391 ENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVEKSPKFG 212
           ENT+T+GTQH LDPLTT+K R N++G ASALIQH WRPKS+ T S EVDT+A+EKS K G
Sbjct: 209 ENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAKIG 268

Query: 211 LALSLKP 191
           LA++LKP
Sbjct: 269 LAVALKP 275

>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 273

 Score =  100 bits (248), Expect = 1e-21
 Identities = 47/67 (70%), Positives = 55/67 (82%)
 Frame = -2

Query: 391 ENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVEKSPKFG 212
           EN ITVGTQH LDPLTT+K R NN G+A+ALIQH WRPKS  T S EVD+KA++KS K G
Sbjct: 207 ENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVG 266

Query: 211 LALSLKP 191
           +AL+LKP
Sbjct: 267 IALALKP 273

>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1|
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 275

 Score = 97.8 bits (242), Expect = 5e-21
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = -2

Query: 391 ENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVEKSPKFG 212
           ++TITVGTQH LDPLT++K R N+ GIASALIQH W+PKS  T S EVDTK+++KS K G
Sbjct: 209 DSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVG 268

Query: 211 LALSLKP 191
           LAL+LKP
Sbjct: 269 LALALKP 275

>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 273

 Score = 97.8 bits (242), Expect = 5e-21
 Identities = 45/67 (67%), Positives = 55/67 (82%)
 Frame = -2

Query: 391 ENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVEKSPKFG 212
           EN++T GTQH LDPLT +K R+NN G ASAL+QH WRPKSV T S EVDTKA++KS K G
Sbjct: 207 ENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAIDKSSKVG 266

Query: 211 LALSLKP 191
           +A++LKP
Sbjct: 267 IAVALKP 273

>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 277

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 42/66 (63%), Positives = 54/66 (81%)
 Frame = -2

Query: 391 ENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVEKSPKFG 212
           E+T+  G+QH LDP TT+K R+NN+G+ASAL+QH WRPKS +T S +VDTKA+EKS K G
Sbjct: 211 ESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTKAIEKSTKVG 270

Query: 211 LALSLK 194
           L+L LK
Sbjct: 271 LSLVLK 276

>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 44/67 (65%), Positives = 53/67 (79%)
 Frame = -2

Query: 391 ENTITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVEKSPKFG 212
           EN++T GTQH LDPLT +K R NN G ASALIQH + PKS+ T S EVDTKA+EKS K G
Sbjct: 209 ENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEKSSKVG 268

Query: 211 LALSLKP 191
           +A++LKP
Sbjct: 269 IAIALKP 275

>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin|
          Length = 282

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = -2

Query: 385 TITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAV-EKSPKFGL 209
           T+ + +++ LD  T +KG+ N+ G+A+       RP   +    ++DT+ + + + K GL
Sbjct: 217 TLELASKYALDKDTFVKGKINSAGVATLSYFQTVRPGVTVGLGLQLDTQRLGQPAHKAGL 276

Query: 208 ALS 200
           +L+
Sbjct: 277 SLA 279

>DYR1A_RAT (Q63470) Dual specificity tyrosine-phosphorylation-regulated kinase|
           1A (EC 2.7.12.2) (Protein kinase minibrain homolog)
           (MNBH) (RP86) (Dual specificity YAK1-related kinase)
          Length = 763

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +3

Query: 93  GITSSVRPSFVHWTKS*WYQNASILMHPQIPH-QGLSDRASPNLG--LFSTALVSTSVEK 263
           G TS+ +PS V    S  +  A + M  Q+PH    SDR  PN+     S    S  +++
Sbjct: 5   GETSACKPSSVRLAPSFSFHAAGLQMAAQMPHSHQYSDRRQPNISDQQVSALSYSDQIQQ 64

Query: 264 VMTDLGLHACWMSALAMPKLLYRP 335
            +T+  +    M    MP+    P
Sbjct: 65  PLTNQVMPDIVMLQRRMPQTFRDP 88

>DYR1A_HUMAN (Q13627) Dual specificity tyrosine-phosphorylation-regulated kinase|
           1A (EC 2.7.12.1) (Protein kinase minibrain homolog)
           (MNBH) (HP86) (Dual specificity YAK1-related kinase)
          Length = 763

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +3

Query: 93  GITSSVRPSFVHWTKS*WYQNASILMHPQIPH-QGLSDRASPNLG--LFSTALVSTSVEK 263
           G TS+ +PS V    S  +  A + M  Q+PH    SDR  PN+     S    S  +++
Sbjct: 5   GETSACKPSSVRLAPSFSFHAAGLQMAGQMPHSHQYSDRRQPNISDQQVSALSYSDQIQQ 64

Query: 264 VMTDLGLHACWMSALAMPKLLYRP 335
            +T+  +    M    MP+    P
Sbjct: 65  PLTNQVMPDIVMLQRRMPQTFRDP 88

>VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin|
          Length = 283

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/53 (22%), Positives = 29/53 (54%)
 Frame = -2

Query: 382 ITVGTQHELDPLTTLKGRYNNFGIASALIQHAWRPKSVITFSTEVDTKAVEKS 224
           + V T++ +DP++ +KG+ N+ G+A+       R    +      DT+ ++++
Sbjct: 219 LEVATKYRIDPVSFVKGKINDRGVAAIAYNVLLREGVTLGVGASFDTQKLDQA 271

>PEX5_PICPA (P33292) Peroxisomal targeting signal receptor (Peroxisomal protein|
           PAS8) (Peroxin-5) (PTS1 receptor)
          Length = 576

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 10  PVAHINWVETPRVAG*KRQISLSHHQSWALQVPSVQA-LFTGPRADGTKML 159
           PV   NW +  + AG + Q     HQ   L VP V+A ++ G R  G  M+
Sbjct: 122 PVQSTNWAQDFQQAGPEVQHHAQQHQHPILSVPGVRAGIYGGGRLMGGSMM 172

>Y1842_MYCTU (Q50592) Hypothetical UPF0053 protein Rv1842c/MT1890|
          Length = 455

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +3

Query: 165 LMHPQIPHQGLSDRASPNLGLFSTALVSTSVEKVMTDLGLHACWMSALAMPKLL--YRPL 338
           L HP +   G+SDR +  L  F   ++ TS+  V  +L           +PK L   RPL
Sbjct: 88  LPHPGLVAVGMSDRVADGLITFFALVIVTSLSMVFGEL-----------VPKYLAVARPL 136

Query: 339 RVVR 350
           R  R
Sbjct: 137 RTAR 140

>MYO2_SCHPO (Q9USI6) Myosin type-2 heavy chain 1 (Myosin type II heavy chain 1)|
          Length = 1526

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -2

Query: 364 HELDPLTTLKGRYNNFGIASALIQHAWRPKSV-ITFSTEVDTKAVEKSPKF 215
           H+L P   L  + N  GI S L +    PK+   TF++++D     KS K+
Sbjct: 499 HDLQPTIDLIEKANPIGILSCLDEECVMPKATDATFTSKLDALWRNKSLKY 549

>ARX1_YEAST (Q03862) Probable metalloprotease ARX1 (EC 3.-.-.-) (Associated|
           with ribosomal export complex protein 1)
          Length = 593

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = +3

Query: 6   TASSTYQLGRNPSGSRLKTTDKFVASPKLGITSSVRPSFVHWTKS*WYQNASILMHPQIP 185
           T + +Y  G  P GSR++   +F+A    GI +      V WT+S  +Q A +L +    
Sbjct: 229 TIARSYNCGVVP-GSRVRRIRRFLAGQNEGIVAEREYKGVVWTES--HQEADLLSNTDAK 285

Query: 186 HQGLSDR 206
              + DR
Sbjct: 286 DLTVVDR 292

>UNG_NEIMB (Q9JZA1) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 219

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 201 HSSPDVGFAGALGC*HFGTISSWSSEQSLDGRN 103
           H SP   + G  GC HF   +S+ S   +D  N
Sbjct: 184 HPSPLSAYRGFFGCRHFSQANSYLSRHGIDPIN 216

>UNG_NEIMA (Q9JUC4) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)|
          Length = 219

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 201 HSSPDVGFAGALGC*HFGTISSWSSEQSLDGRN 103
           H SP   + G  GC HF   +S+ S   +D  N
Sbjct: 184 HPSPLSAYRGFFGCRHFSQANSYLSRHGIDPIN 216

>DYR1A_MOUSE (Q61214) Dual specificity tyrosine-phosphorylation-regulated kinase|
           1A (EC 2.7.12.1) (Protein kinase minibrain homolog)
           (MNBH) (MP86) (Dual specificity YAK1-related kinase)
          Length = 763

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +3

Query: 93  GITSSVRPSFVHWTKS*WYQNASILMHPQIPH-QGLSDRASPNLG--LFSTALVSTSVEK 263
           G TS+ +PS V    S  +  A + M  Q+PH    SDR  P++     S    S  +++
Sbjct: 5   GETSACKPSSVRLAPSFSFHAAGLQMAAQMPHSHQYSDRRQPSISDQQVSALPYSDQIQQ 64

Query: 264 VMTDLGLHACWMSALAMPKLLYRP 335
            +T+  +    M    MP+    P
Sbjct: 65  PLTNQVMPDIVMLQRRMPQTFRDP 88

>TYPH_METBF (Q466X0) Putative thymidine phosphorylase (EC 2.4.2.4) (TdRPase)|
          Length = 506

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 30  GRNPSGSRLKTTDKFVASPKLGITSSVRPSFVHWTK 137
           GR    +   TTD  V    LG+ S V   FV+W K
Sbjct: 39  GRESISAIADTTDDMVPPGTLGVFSEVYEHFVNWDK 74

>RYR1_PIG (P16960) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5035

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
 Frame = +3

Query: 39   PSGSRLKTTDKFVASPKLGITSSVR-------PSFVHWTKS*WYQNASILMHPQIPHQGL 197
            P G R +   +    P +G+T+S+R       P FV    +     A   + P IP + L
Sbjct: 1749 PPGKRTENGPRRHGLPGVGVTTSLRPPHHFSAPCFVAALPAVGAAEAPARLSPSIPLEAL 1808

Query: 198  SDRASPNLG 224
             D+A   LG
Sbjct: 1809 RDKALRMLG 1817


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,205,280
Number of Sequences: 219361
Number of extensions: 1109645
Number of successful extensions: 2561
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2560
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)