>SSDH_MOUSE (Q8BWF0) Succinate semialdehyde dehydrogenase, mitochondrial|
           precursor (EC 1.2.1.24) (NAD(+)-dependent succinic
           semialdehyde dehydrogenase)
          Length = 523

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/51 (33%), Positives = 20/51 (39%)
 Frame = +3

Query: 228 PNLPSSGAAMPNGASSPMKNAALXXXXXXIWLFESASERGARWLPVPICRP 380
           P LP  G   P  A +P ++ A         L    S  G RWLP P   P
Sbjct: 15  PALPPPGRFRPEPAGTPRRSYASGPGGLHADLLRGDSFVGGRWLPAPATFP 65

>MOK1_SCHPO (Q9USK8) Cell wall alpha-1,3-glucan synthase mok1 (EC 2.4.1.183)|
          Length = 2410

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = -2

Query: 271  DAPFGMAAPELGRFGAGFDLSAADYAGAMQQQQPQKHVGPNWFY*TRTAKEPFLI 107
            D PFG+ A E GR GA   L      G + Q        P W+Y   ++  P L+
Sbjct: 1525 DEPFGLVAVEFGRKGA---LGIGARVGGLGQM-------PGWWYSVESSATPHLL 1569

>APC_RAT (P70478) Adenomatous polyposis coli protein (Protein APC)|
          Length = 2842

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 8/53 (15%)
 Frame = -3

Query: 222  GSTCQRRTTPAPCSSSSRRSTLDPTG--------FTEQEQPRNHSSLACSSRP 88
            G TC    TP   SSSS+ S+  P+G        F     PR  S+ + S+RP
Sbjct: 2751 GETCMAERTPFSSSSSSKHSS--PSGTVAARVTPFNYNPSPRKSSADSTSARP 2801

>SEC65_CANAL (O14415) Signal recognition particle SEC65 subunit|
          Length = 275

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 195 PAPCSSSSRRSTLDPTGFTEQEQ 127
           P P  +SSR   +DP  FTE+E+
Sbjct: 65  PPPKQASSRNGIMDPNSFTEEEK 87

>AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein) (Phosphoprotein F1-20)
          Length = 901

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 265 PFGMAAPELGRFGAGFDLSAADYAGAMQQQQPQKHVGP 152
           P G  AP +G+ GAGF +  +     M  QQP     P
Sbjct: 819 PPGAGAPSVGQPGAGFGMPPSGTGMTMMSQQPVMFAQP 856

>AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 915

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 265 PFGMAAPELGRFGAGFDLSAADYAGAMQQQQPQKHVGP 152
           P G  AP +G+ GAG+ +  A     M  QQP     P
Sbjct: 833 PPGAGAPSVGQPGAGYGMPPAGTGMTMMPQQPVMFAQP 870

>SORC1_HUMAN (Q8WY21) VPS10 domain-containing receptor SorCS1 precursor (hSorCS)|
          Length = 1168

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -3

Query: 222 GSTCQRRTTPAPCSSSSRRSTLDPTGFTEQEQPRNHSSLACSSRPLEFIRLP-FSISP 52
           GS C     P+P  SS+ RS   P GF+ Q +P         + PL  +  P FS++P
Sbjct: 35  GSCC-----PSPHPSSAPRSASTPRGFSHQGRPGR-----APATPLPLVVRPLFSVAP 82

>SL9A1_HUMAN (P19634) Sodium/hydrogen exchanger 1 (Na(+)/H(+) exchanger 1)|
           (NHE-1) (Solute carrier family 9 member 1) (Na(+)/H(+)
           antiporter, amiloride-sensitive) (APNH)
          Length = 815

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
 Frame = -3

Query: 204 RTTPAPCSSSSRRSTLDPTGFTEQEQPRNHSSLACSSRPLE----------FIRLPFSIS 55
           R++  P   S    T  P   T + +P NHS      +P +           +R PF IS
Sbjct: 47  RSSEPPRERSIGDVTTAPPEVTPESRPVNHSVTDHGMKPRKAFPVLGIDYTHVRTPFEIS 106

Query: 54  PWRLATC 34
            W L  C
Sbjct: 107 LWILLAC 113

>WRK21_ARATH (O04336) Probable WRKY transcription factor 21 (WRKY DNA-binding|
           protein 21)
          Length = 380

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -3

Query: 213 CQRRTTPAPCSSSSRRSTLDPTGFTEQEQPRNHSSLACSSR 91
           CQ+RTT  P SSSS+++ +  +GF E    +   SL   +R
Sbjct: 83  CQQRTTEVP-SSSSQKTPVLRSGFQELSLRQPSDSLTLGTR 122

>IDD_HUMAN (P98153) Integral membrane protein DGCR2/IDD precursor|
          Length = 550

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 120 NHSSLACSSRPLEFIRLPFSISPWRLATCKDQSN 19
           N    AC S  ++ I LP+    W  ATC+D+S+
Sbjct: 31  NPGQFACRSGTIQCIPLPWQCDGW--ATCEDESD 62

>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 3-like 2 (EC
           3.6.1.-) (SMARCA3-like protein 2)
          Length = 1029

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +2

Query: 20  FD*SLQVARRHGLIENGSLMNSNGLE-LHANEEWFLGCS 133
           F  S  V   H + E    +N  G E +  NE WF+GCS
Sbjct: 78  FGDSGSVGANHRVEEENESVNGGGEESVSGNEWWFVGCS 116

>PBPB_VIBCH (Q9KUC0) Penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein|
           polymerase) [Includes: Penicillin-insensitive
           transglycosylase (EC 2.4.1.129) (Peptidoglycan
           glycosyltransferase) (Peptidoglycan TGase);
           Penicillin-sensitive transpeptidase (EC 3.
          Length = 777

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -3

Query: 168 RSTLDPTGFTEQEQPRNHSSLACSSRPLEFIRLPFSIS 55
           R+ LD   + +  QPR     A SS  +E IR PF  +
Sbjct: 92  RNELDVLNYRKVAQPRFPGEYASSSSRIELIRRPFEFA 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,020,618
Number of Sequences: 219361
Number of extensions: 789175
Number of successful extensions: 2306
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2306
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)