ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast73e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GLYM_ARATH (Q9SZJ5) Serine hydroxymethyltransferase, mitochondri... 55 8e-08
2GLYC_CAEEL (P50432) Serine hydroxymethyltransferase (EC 2.1.2.1)... 52 5e-07
3GLYC_HUMAN (P34896) Serine hydroxymethyltransferase, cytosolic (... 48 1e-05
4GLYM_PEA (P34899) Serine hydroxymethyltransferase, mitochondrial... 48 1e-05
5GLYM_SOLTU (P50433) Serine hydroxymethyltransferase, mitochondri... 47 3e-05
6GLYC_MOUSE (P50431) Serine hydroxymethyltransferase, cytosolic (... 45 9e-05
7GLYC_RABIT (P07511) Serine hydroxymethyltransferase, cytosolic (... 45 1e-04
8GLYM_HUMAN (P34897) Serine hydroxymethyltransferase, mitochondri... 44 2e-04
9GLYC_SHEEP (P35623) Serine hydroxymethyltransferase, cytosolic (... 42 7e-04
10GLYM_CANAL (O13425) Serine hydroxymethyltransferase, mitochondri... 39 0.008
11GLYD_SCHPO (O13972) Probable serine hydroxymethyltransferase, cy... 35 0.090
12GLYC_SCHPO (Q10104) Probable serine hydroxymethyltransferase, cy... 32 0.58
13G6PI_MOUSE (P06745) Glucose-6-phosphate isomerase (EC 5.3.1.9) (... 32 0.99
14GLYM_CANGA (Q6FQ44) Serine hydroxymethyltransferase, mitochondri... 32 0.99
15GLYC_YEAST (P37291) Serine hydroxymethyltransferase, cytosolic (... 31 1.3
16MRC1_SCHPO (Q9P7T4) Mediator of replication checkpoint protein 1... 31 1.3
17IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2) 31 1.3
18MEF2B_HUMAN (Q02080) Myocyte-specific enhancer factor 2B (Serum ... 30 2.2
19VGLB_HSVA1 (Q04463) Glycoprotein B precursor 30 2.2
20CD2A2_MONDO (O77618) Cyclin-dependent kinase inhibitor 2A, isofo... 30 2.9
21TGT_PROMP (Q7TUG0) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)... 30 2.9
22K0174_MOUSE (Q9CX00) Protein KIAA0174 30 3.8
23MURC_CAMJR (Q5HU47) UDP-N-acetylmuramate--L-alanine ligase (EC 6... 30 3.8
24GLYC_CANAL (O13426) Serine hydroxymethyltransferase, cytosolic (... 30 3.8
25K0174_HUMAN (P53990) Protein KIAA0174 (Putative MAPK-activating ... 30 3.8
26GP135_HUMAN (Q8IZ08) Probable G-protein coupled receptor 135 30 3.8
27UCP2_CYPCA (Q9W725) Mitochondrial uncoupling protein 2 (UCP 2) 29 4.9
28RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2 29 4.9
29GRPE_CHLMU (P23575) Protein grpE (HSP-70 cofactor) 29 4.9
30YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon ... 29 4.9
31G6PI_CRIGR (P50309) Glucose-6-phosphate isomerase (EC 5.3.1.9) (... 29 6.4
32COAA1_CHICK (P08125) Collagen alpha-1(X) chain precursor 29 6.4
33MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-... 28 8.4
34GOGA3_HUMAN (Q08378) Golgin subfamily A member 3 (Golgin-160) (G... 28 8.4
35YHZ2_YEAST (P38878) Hypothetical 32.1 kDa protein in CTF8-EGD2 i... 28 8.4

>GLYM_ARATH (Q9SZJ5) Serine hydroxymethyltransferase, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 517

 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
 Frame = -1

Query: 456 GSGEKDFEQIAEFLHQAVTICLNIQKE-HGKLLKDFSKGLVNNKDIEN----LKVEVEKF 292
           G  E+DF ++AE+  +AVTI L ++ E  G  LKDF   + ++  I++    L+ EVE+F
Sbjct: 440 GFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEF 499

Query: 291 ALSFDMPGFTLESMKYK 241
           A  F   GF  E+MKYK
Sbjct: 500 AKQFPTIGFEKETMKYK 516



to top

>GLYC_CAEEL (P50432) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine|
           methylase) (Glycine hydroxymethyltransferase) (SHMT)
           (Glycosylation-related protein 1)
          Length = 507

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -1

Query: 456 GSGEKDFEQIAEFLHQAVTICLNIQKEHGKLLKDFSKGLVNN----KDIENLKVEVEKFA 289
           G  E+DFE++ +F+H+ V I      E GK LKDF      N    KD+ +L   VE+F+
Sbjct: 437 GFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKSFTETNEPFKKDVADLAKRVEEFS 496

Query: 288 LSFDMPG 268
             F++PG
Sbjct: 497 TKFEIPG 503



to top

>GLYC_HUMAN (P34896) Serine hydroxymethyltransferase, cytosolic (EC 2.1.2.1)|
           (Serine methylase) (Glycine hydroxymethyltransferase)
           (SHMT)
          Length = 483

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
 Frame = -1

Query: 447 EKDFEQIAEFLHQAVTICLNIQKEHG--KLLKDFSKGLVNNK---DIENLKVEVEKFALS 283
           EKDF+++A F+H+ + + L IQ + G    LK+F + L  +K    ++ L+ EVE FA  
Sbjct: 415 EKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQAAVQALREEVESFASL 474

Query: 282 FDMPG 268
           F +PG
Sbjct: 475 FPLPG 479



to top

>GLYM_PEA (P34899) Serine hydroxymethyltransferase, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 518

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
 Frame = -1

Query: 456 GSGEKDFEQIAEFLHQAVTICLNIQKEH-GKLLKDFSKGLVNNK----DIENLKVEVEKF 292
           G  E+DF ++AE+   AV++ L ++ E  G  LKDF + L  +     +I  LK +VE+F
Sbjct: 441 GFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEF 500

Query: 291 ALSFDMPGFTLESMKYKE 238
           A  F   GF   +MKY +
Sbjct: 501 AKQFPTIGFEKATMKYNK 518



to top

>GLYM_SOLTU (P50433) Serine hydroxymethyltransferase, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 518

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
 Frame = -1

Query: 447 EKDFEQIAEFLHQAVTICLNIQKE-HGKLLKDFSKGLVNN----KDIENLKVEVEKFALS 283
           E+DF ++A+F   AV I + ++ E  G  LKDF   L ++     +I  L+ +VE++A  
Sbjct: 444 EEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVATLESSAPIKSEIAKLRHDVEEYAKQ 503

Query: 282 FDMPGFTLESMKYK 241
           F   GF  E+MKYK
Sbjct: 504 FPTIGFEKETMKYK 517



to top

>GLYC_MOUSE (P50431) Serine hydroxymethyltransferase, cytosolic (EC 2.1.2.1)|
           (Serine methylase) (Glycine hydroxymethyltransferase)
           (SHMT)
          Length = 478

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
 Frame = -1

Query: 447 EKDFEQIAEFLHQAVTICLNIQKEHG--KLLKDFSKGLVNNKDIEN----LKVEVEKFAL 286
           E+DF+++A F+H+ + + L IQ        LK+F + L  ++ I++    L+ EVE FA 
Sbjct: 409 EEDFQKVAHFIHRGIELTLQIQSHMATKATLKEFKEKLAGDEKIQSAVATLREEVENFAS 468

Query: 285 SFDMPG 268
           +F +PG
Sbjct: 469 NFSLPG 474



to top

>GLYC_RABIT (P07511) Serine hydroxymethyltransferase, cytosolic (EC 2.1.2.1)|
           (Serine methylase) (Glycine hydroxymethyltransferase)
           (SHMT)
          Length = 483

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
 Frame = -1

Query: 447 EKDFEQIAEFLHQAVTICLNIQKEHG--KLLKDFSKGLV----NNKDIENLKVEVEKFAL 286
           EKDF+++A F+H+ + + + IQ + G    LK+F + L     + + +  L+ EVE FA 
Sbjct: 414 EKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAA 473

Query: 285 SFDMPG 268
            F +PG
Sbjct: 474 LFPLPG 479



to top

>GLYM_HUMAN (P34897) Serine hydroxymethyltransferase, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 504

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
 Frame = -1

Query: 447 EKDFEQIAEFLHQAVTICLNIQKEHGKLLKDFSKGLVNNKD----IENLKVEVEKFALSF 280
           E DF ++ +F+ + V I L ++ +  KL +DF   L+ + +    + NL+  VE+FA +F
Sbjct: 438 EDDFRRVVDFIDEGVNIGLEVKSKTAKL-QDFKSFLLKDSETSQRLANLRQRVEQFARAF 496

Query: 279 DMPGF 265
            MPGF
Sbjct: 497 PMPGF 501



to top

>GLYC_SHEEP (P35623) Serine hydroxymethyltransferase, cytosolic (EC 2.1.2.1)|
           (Serine methylase) (Glycine hydroxymethyltransferase)
           (SHMT)
          Length = 483

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
 Frame = -1

Query: 447 EKDFEQIAEFLHQAVTICLNIQKEHG--KLLKDFSKGLV----NNKDIENLKVEVEKFAL 286
           E+DF ++A F+H+ + + L IQ   G    LK+F + L     + + +  L+ EVE FA 
Sbjct: 414 EEDFRKVAHFIHRGIELTLQIQDAVGVKATLKEFMEKLAGAEEHQRAVTALRAEVESFAT 473

Query: 285 SFDMPG 268
            F +PG
Sbjct: 474 LFPLPG 479



to top

>GLYM_CANAL (O13425) Serine hydroxymethyltransferase, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 493

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
 Frame = -1

Query: 456 GSGEKDFEQIAEFLHQAVTICLNIQ-KEHGK----LLKDFSKGLVNNKDIENLKVEVEKF 292
           G G ++F+++AEF+ QAV I + ++ +E GK    LL  F K    +  ++ L  EV  +
Sbjct: 424 GFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSW 483

Query: 291 ALSFDMPG 268
              + +PG
Sbjct: 484 VSKYPVPG 491



to top

>GLYD_SCHPO (O13972) Probable serine hydroxymethyltransferase, cytosolic (EC|
           2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 467

 Score = 35.0 bits (79), Expect = 0.090
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
 Frame = -1

Query: 456 GSGEKDFEQIAEFLHQAVTICLNIQKEHGK---LLKDFSKGLVNNK---DIENLKVEVEK 295
           G  E+DF ++ +++ +A+T   N+QKE  K    LKDF   L   +   ++  L+ EV +
Sbjct: 397 GFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKAKLGEGEQYPELVQLQKEVAE 456

Query: 294 FALSFDM 274
           +A SF +
Sbjct: 457 WASSFPL 463



to top

>GLYC_SCHPO (Q10104) Probable serine hydroxymethyltransferase, cytosolic (EC|
           2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 472

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
 Frame = -1

Query: 456 GSGEKDFEQIAEFLHQAVTICLNIQ----KEHGKLLKDFSKGLVNN----KDIENLKVEV 301
           G  EKDFE++ E + + V++   I     KE     +DF K  V +     +I  LK EV
Sbjct: 403 GFDEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDF-KAYVGDGSKFSEIAKLKKEV 461

Query: 300 EKFALSFDMP 271
             +A  FD P
Sbjct: 462 ITWAGKFDFP 471



to top

>G6PI_MOUSE (P06745) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI) (Neuroleukin) (NLK)
          Length = 557

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -1

Query: 393 LNIQKEHGKLLKDFSKGLVNNKDIENLKVEVEK 295
           LN+   HG +L D+SK LV NK++  + VE+ K
Sbjct: 41  LNLNTNHGHILVDYSKNLV-NKEVMQMLVELAK 72



to top

>GLYM_CANGA (Q6FQ44) Serine hydroxymethyltransferase, mitochondrial precursor|
           (EC 2.1.2.1) (Serine methylase) (Glycine
           hydroxymethyltransferase) (SHMT)
          Length = 485

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
 Frame = -1

Query: 456 GSGEKDFEQIAEFLHQAVTICLNIQKEHGKLLKD-------FSKGLVNNKDIENLKVEVE 298
           G  E+DF+++AE++  AV + + ++ +     KD       F +    ++ ++ L  EV 
Sbjct: 414 GFQEQDFKKVAEYIDNAVKLSIALKSQESADAKDVRSKLNSFKQLCDQSEPVQKLAEEVS 473

Query: 297 KFALSFDMPG 268
            +  +F +PG
Sbjct: 474 SWVGTFPVPG 483



to top

>GLYC_YEAST (P37291) Serine hydroxymethyltransferase, cytosolic (EC 2.1.2.1)|
           (Serine methylase) (Glycine hydroxymethyltransferase)
           (SHMT)
          Length = 469

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -1

Query: 456 GSGEKDFEQIAEFLHQAVTICLNIQKEHGK---LLKDFSKGLVNNKDIEN 316
           G GE+DF +I +++++AV     +Q+   K    LKDF   +    D+ N
Sbjct: 403 GMGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKAKVDEGSDVLN 452



to top

>MRC1_SCHPO (Q9P7T4) Mediator of replication checkpoint protein 1 (DNA|
           replication checkpoint mediator mrc1)
          Length = 1019

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1

Query: 390 NIQKEHGKLLKDFSKGLVNNKDIENLKVEVEKFAL 286
           N++KE  K   D S G+VN++DI+ L VE +   L
Sbjct: 271 NVEKEEPKPSVDRSTGIVNSEDIKELSVEDDSLEL 305



to top

>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)|
          Length = 1338

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
 Frame = +3

Query: 336 SPGPWRSP*AASRAPS-GCSGRWS----LPGGGTRRSARSPS 446
           SPGP R+P + S   S GC GR S    LP GG  + +RS S
Sbjct: 391 SPGPVRAPLSRSHTLSGGCGGRGSKVALLPAGGALQHSRSMS 432



to top

>MEF2B_HUMAN (Q02080) Myocyte-specific enhancer factor 2B (Serum response|
           factor-like protein 2) (XMEF2) (RSRFR2)
          Length = 365

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +3

Query: 318 SQCPCCSPGPWRSP*AASRAPSGCSGRWSLPGGGTR 425
           S  PC SPGPW+S        +GC   W   G G R
Sbjct: 300 SPIPCSSPGPWQSLCGLGPPCAGCP--WPTAGPGRR 333



to top

>VGLB_HSVA1 (Q04463) Glycoprotein B precursor|
          Length = 933

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 336 SPGPWRSP*AASRAPSGCSGRW-SLPGGGTRRSAR 437
           SPGP R P    R P G SGR    PG GTR +AR
Sbjct: 84  SPGPDRPP----RGPGGGSGRRRGSPGNGTRSAAR 114



to top

>CD2A2_MONDO (O77618) Cyclin-dependent kinase inhibitor 2A, isoform 2 (p19ARF)|
          Length = 155

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
 Frame = +3

Query: 285 RGQTSRPRP*GS------QCPCCSPGPWRSP*AASRAPSGCSGRWSLPGGGTRRSARSP 443
           RG T  PRP         +CP   PG   +   + R  +GC G    P  G RR  R+P
Sbjct: 76  RGGTQHPRPDNPHPASPRRCPGGLPGHSDAA-PSGRGAAGCQGLLGSPACGPRRGTRTP 133



to top

>TGT_PROMP (Q7TUG0) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)|
           (tRNA-guanine transglycosylase) (Guanine insertion
           enzyme)
          Length = 372

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/81 (22%), Positives = 35/81 (43%)
 Frame = -1

Query: 453 SGEKDFEQIAEFLHQAVTICLNIQKEHGKLLKDFSKGLVNNKDIENLKVEVEKFALSFDM 274
           + E D E   E  H  +  C+   ++  + L     G+V       L+    KF  SFD+
Sbjct: 153 ANENDIEDSLERTHSWLQKCVETHQKSNQALF----GIVQGGKYPRLREHSAKFTSSFDL 208

Query: 273 PGFTLESMKYKE*DDDTYAMV 211
           PG  +  +   E  ++ ++++
Sbjct: 209 PGIAVGGVSVGEAVEEIHSVI 229



to top

>K0174_MOUSE (Q9CX00) Protein KIAA0174|
          Length = 362

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 432 QIAEFLHQAVTICLNIQKEHGKLLKDFSKGLVNNKDIENLKVE 304
           ++AE    A  +C    KE+GKL +    G VN++ +  L VE
Sbjct: 113 EVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVE 155



to top

>MURC_CAMJR (Q5HU47) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)|
           (UDP-N-acetylmuramoyl-L-alanine synthetase)
          Length = 431

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
 Frame = -1

Query: 426 AEFLHQAVTICLNIQKEHGKLLKDFSKGLVNNKDIENLKVEVEKFA--LSF---DMPGFT 262
           AEFL  A    +N + E  K  K+ S  L  +KDI+N  + +E F    SF   D+  F 
Sbjct: 193 AEFLDTAKIRVINAEDEFLKNYKNESTKLYPSKDIKNCTMRIENFKPFTSFELKDLGEFK 252

Query: 261 LESMKYKE*DDDTYAMVVSL 202
           +  M Y    D + A++ +L
Sbjct: 253 VFGMGYHLALDASLAILAAL 272



to top

>GLYC_CANAL (O13426) Serine hydroxymethyltransferase, cytosolic (EC 2.1.2.1)|
           (Serine methylase) (Glycine hydroxymethyltransferase)
           (SHMT) (SHMII)
          Length = 469

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
 Frame = -1

Query: 456 GSGEKDFEQIAEFLHQAVTICLNIQKEHGK---LLKDFSKGLVNNKD-IENLKVEVEKFA 289
           G GE+DF++I  ++  AV     +Q +  K    LKDF   +  + + ++ ++ E+ ++A
Sbjct: 403 GLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDFKNAVSGDSEKLKAVRDEIYQWA 462

Query: 288 LSFDM 274
            SF +
Sbjct: 463 GSFPL 467



to top

>K0174_HUMAN (P53990) Protein KIAA0174 (Putative MAPK-activating protein PM28)|
          Length = 364

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 432 QIAEFLHQAVTICLNIQKEHGKLLKDFSKGLVNNKDIENLKVE 304
           ++AE    A  +C    KE+GKL +    G VN++ +  L VE
Sbjct: 113 EVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVE 155



to top

>GP135_HUMAN (Q8IZ08) Probable G-protein coupled receptor 135|
          Length = 494

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +3

Query: 309 P*GSQCPCCSPGPWRSP*AASRAPSGCSG 395
           P G   P  + GPWR   AASR  S C G
Sbjct: 167 PPGGSAPAAAAGPWRGFCAASRFFSSCFG 195



to top

>UCP2_CYPCA (Q9W725) Mitochondrial uncoupling protein 2 (UCP 2)|
          Length = 310

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = -2

Query: 131 SPG*FCKRLPPLVLCLPSTSPSYFFVGIV----RVGSWNV 24
           +PG +C  L   V  L    P  F+ G +    R+GSWNV
Sbjct: 247 APGQYCSALNCAVAMLTKEGPKAFYKGFMPSFLRLGSWNV 286



to top

>RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2|
          Length = 1514

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 22/55 (40%), Positives = 26/55 (47%)
 Frame = +3

Query: 291 QTSRPRP*GSQCPCCSPGPWRSP*AASRAPSGCSGRWSLPGGGTRRSARSPSHQT 455
           +TSRP P GS  P  S GP+ S    S A + CS     P  GT   + SP   T
Sbjct: 765 ETSRPSPLGSYSPVRSAGPFGSS-TDSSASTSCS---PPPEQGTAADSVSPWSHT 815



to top

>GRPE_CHLMU (P23575) Protein grpE (HSP-70 cofactor)|
          Length = 190

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = -1

Query: 420 FLHQAVTICLNIQKEHGKLLKDFSKGL-VNNKDIENLKVEVEKF 292
           +LH+AV I        G +L++F+KG  + ++ I   KV+V KF
Sbjct: 134 YLHEAVEIEETTDIPEGTILEEFTKGYKIGDRPIRVAKVKVAKF 177



to top

>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 10/63 (15%)
 Frame = +3

Query: 282 RRGQTSRPRP*GSQC----PCCSPGPWRSP*------AASRAPSGCSGRWSLPGGGTRRS 431
           RR   S PRP         P   P P R+P       A +RAP+GCS     P   T R 
Sbjct: 260 RRTTPSAPRPSSRPARPPIPAARPPPRRTPGTPRPAAARARAPAGCSPARRTPSAPTDRR 319

Query: 432 ARS 440
            R+
Sbjct: 320 CRA 322



to top

>G6PI_CRIGR (P50309) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 558

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -1

Query: 393 LNIQKEHGKLLKDFSKGLVNNKDIENLKVEVEK 295
           LN+   HG +L D+SK LV NK++  + V++ +
Sbjct: 42  LNLNTTHGHILVDYSKNLV-NKEVMQMLVDLAR 73



to top

>COAA1_CHICK (P08125) Collagen alpha-1(X) chain precursor|
          Length = 674

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 18/48 (37%), Positives = 19/48 (39%)
 Frame = +3

Query: 279 QRRGQTSRPRP*GSQCPCCSPGPWRSP*AASRAPSGCSGRWSLPGGGT 422
           Q RG+   P P G   P   PGP   P   S  P G  G    PG  T
Sbjct: 50  QMRGEQGPPGPPGPIGPRGQPGPAGKPGFGSPGPQGPPGPLGPPGFST 97



to top

>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding|
           protein MBD6)
          Length = 1003

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +3

Query: 105 EAFTKLSRAPGRANKSHRSTARWALRGGQQGLEARQPWHMYH 230
           EA     R PG   +  R   +W  RGG  G   R P   +H
Sbjct: 871 EARPARGRKPGSRREPGRLALKWGTRGGFNGQMERSPRRTHH 912



to top

>GOGA3_HUMAN (Q08378) Golgin subfamily A member 3 (Golgin-160) (Golgi|
            complex-associated protein of 170 kDa) (GCP170)
          Length = 1498

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = -1

Query: 444  KDFEQIAEFLHQAVTICLNIQKEHGKLLKDFSKGLVNNKDIENLKVEVEK 295
            K  ++IA+F  +       +Q    +L +  SK  V N+++ENLK EV++
Sbjct: 1246 KHSQEIAQFQAELAEARAQLQLLQKQLDEQLSKQPVGNQEMENLKWEVDQ 1295



to top

>YHZ2_YEAST (P38878) Hypothetical 32.1 kDa protein in CTF8-EGD2 intergenic|
           region
          Length = 278

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 10/152 (6%)
 Frame = -1

Query: 447 EKDFEQIAEFLHQAVTICLNIQKEHGKLLKDFSKGLVNNK------DIENLKVEVEKFAL 286
           +K  E++ E  H   T  +  +   G+   D +  L++++      ++ NLK E+EKF  
Sbjct: 121 QKKLEKLKEETHYNATSSIIQRFSSGEDQNDDAMVLLDDELNAKYQELNNLKTELEKFKK 180

Query: 285 SFDMPGFTLESMKYKE*DDDTYAMVVSLLSLVGRRAMPTVLCFYEIYWLALEPWIVL*TP 106
              + G        KE  D  +  ++S+L+  G   + +          +L P+  +  P
Sbjct: 181 ESHVKGLK------KEDSDAWFDKIISVLA--GGNELDSTS--------SLSPFKKIICP 224

Query: 105 P----TSCALFAVHIPIIFLCRNCSRGIMECR 22
                ++C   A   PIIF+C +C+  I E +
Sbjct: 225 QCHWKSNCYRLASK-PIIFICPHCNHKIDEVK 255


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,575,849
Number of Sequences: 219361
Number of extensions: 1346988
Number of successful extensions: 4801
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 4585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4788
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top