ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast73d05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188343.1| Oryza sativa (japonica cultivar-group), Ozsa8094 predicted mRNA Length = 960 Score = 224 bits (113), Expect = 2e-55 Identities = 256/303 (84%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 113 agttcactcgccggcagtttagccggacttcgccgttcttcccggtgagcgc---caggt 169 ||||||||||||||||||| | ||| || |||||||||||||||||||||| ||||| Sbjct: 952 agttcactcgccggcagttgatccgtacctcgccgttcttcccggtgagcgggctcaggt 893 Query: 170 tgcccatcctcaccatggcggcggcgaagtctaccgcgaagagcgtggcgttggcggcgt 229 |||||| ||||||||| |||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 892 tgcccagcctcaccatcgcggcggcgaagtccgccgcgaacgtcgtcgcgttggcggcgt 833 Query: 230 atgctcgcacgatcgcgtccgtgctgccgttgcccgcgccgctcccgtagagctcctggt 289 | || ||||||| |||||||||| |||| ||||| |||||||| ||| |||||||||||| Sbjct: 832 acgcgcgcacgaacgcgtccgtggtgccattgccggcgccgctgccgaagagctcctggt 773 Query: 290 cggaccgcaggagcacgcggcgagcgacgaggtcctggaagtagccgttgtcgaatgcgg 349 |||| ||||| || |||||||| || ||||||| ||||||| |||||||||| | | Sbjct: 772 cggagcgcagcaggacgcggcggctgaggaggtccgtgaagtaggcgttgtcgaaggtgt 713 Query: 350 agggggcgcgcagctcgagcggcgcgaggtttccgtcaccgccggcggaagggcaggcct 409 ||| || |||||||||||||||||||||| ||||| ||||||| || ||||||| || Sbjct: 712 tgggcgcctgcagctcgagcggcgcgaggttgccgtcgccgccggtggtcgggcaggact 653 Query: 410 tgg 412 ||| Sbjct: 652 tgg 650
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 224 bits (113), Expect = 2e-55 Identities = 256/303 (84%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 113 agttcactcgccggcagtttagccggacttcgccgttcttcccggtgagcgc---caggt 169 ||||||||||||||||||| | ||| || |||||||||||||||||||||| ||||| Sbjct: 5789647 agttcactcgccggcagttgatccgtacctcgccgttcttcccggtgagcgggctcaggt 5789588 Query: 170 tgcccatcctcaccatggcggcggcgaagtctaccgcgaagagcgtggcgttggcggcgt 229 |||||| ||||||||| |||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 5789587 tgcccagcctcaccatcgcggcggcgaagtccgccgcgaacgtcgtcgcgttggcggcgt 5789528 Query: 230 atgctcgcacgatcgcgtccgtgctgccgttgcccgcgccgctcccgtagagctcctggt 289 | || ||||||| |||||||||| |||| ||||| |||||||| ||| |||||||||||| Sbjct: 5789527 acgcgcgcacgaacgcgtccgtggtgccattgccggcgccgctgccgaagagctcctggt 5789468 Query: 290 cggaccgcaggagcacgcggcgagcgacgaggtcctggaagtagccgttgtcgaatgcgg 349 |||| ||||| || |||||||| || ||||||| ||||||| |||||||||| | | Sbjct: 5789467 cggagcgcagcaggacgcggcggctgaggaggtccgtgaagtaggcgttgtcgaaggtgt 5789408 Query: 350 agggggcgcgcagctcgagcggcgcgaggtttccgtcaccgccggcggaagggcaggcct 409 ||| || |||||||||||||||||||||| ||||| ||||||| || ||||||| || Sbjct: 5789407 tgggcgcctgcagctcgagcggcgcgaggttgccgtcgccgccggtggtcgggcaggact 5789348 Query: 410 tgg 412 ||| Sbjct: 5789347 tgg 5789345 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 166 aggttgcccatcctcaccatggcggcggcgaa 197 |||||||||||| | ||||||||||||||||| Sbjct: 10679609 aggttgcccatcttgaccatggcggcggcgaa 10679640 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaa 197 |||||||||| ||||||||||| ||||||| Sbjct: 12501675 gttgcccatcttcaccatggcgtcggcgaa 12501646 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 32399247 gagcacgcggcgagcgacga 32399266
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 224 bits (113), Expect = 2e-55 Identities = 256/303 (84%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 113 agttcactcgccggcagtttagccggacttcgccgttcttcccggtgagcgc---caggt 169 ||||||||||||||||||| | ||| || |||||||||||||||||||||| ||||| Sbjct: 114349 agttcactcgccggcagttgatccgtacctcgccgttcttcccggtgagcgggctcaggt 114290 Query: 170 tgcccatcctcaccatggcggcggcgaagtctaccgcgaagagcgtggcgttggcggcgt 229 |||||| ||||||||| |||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 114289 tgcccagcctcaccatcgcggcggcgaagtccgccgcgaacgtcgtcgcgttggcggcgt 114230 Query: 230 atgctcgcacgatcgcgtccgtgctgccgttgcccgcgccgctcccgtagagctcctggt 289 | || ||||||| |||||||||| |||| ||||| |||||||| ||| |||||||||||| Sbjct: 114229 acgcgcgcacgaacgcgtccgtggtgccattgccggcgccgctgccgaagagctcctggt 114170 Query: 290 cggaccgcaggagcacgcggcgagcgacgaggtcctggaagtagccgttgtcgaatgcgg 349 |||| ||||| || |||||||| || ||||||| ||||||| |||||||||| | | Sbjct: 114169 cggagcgcagcaggacgcggcggctgaggaggtccgtgaagtaggcgttgtcgaaggtgt 114110 Query: 350 agggggcgcgcagctcgagcggcgcgaggtttccgtcaccgccggcggaagggcaggcct 409 ||| || |||||||||||||||||||||| ||||| ||||||| || ||||||| || Sbjct: 114109 tgggcgcctgcagctcgagcggcgcgaggttgccgtcgccgccggtggtcgggcaggact 114050 Query: 410 tgg 412 ||| Sbjct: 114049 tgg 114047
>dbj|AK105932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B03, full insert sequence Length = 1258 Score = 224 bits (113), Expect = 2e-55 Identities = 256/303 (84%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 113 agttcactcgccggcagtttagccggacttcgccgttcttcccggtgagcgc---caggt 169 ||||||||||||||||||| | ||| || |||||||||||||||||||||| ||||| Sbjct: 1170 agttcactcgccggcagttgatccgtacctcgccgttcttcccggtgagcgggctcaggt 1111 Query: 170 tgcccatcctcaccatggcggcggcgaagtctaccgcgaagagcgtggcgttggcggcgt 229 |||||| ||||||||| |||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 1110 tgcccagcctcaccatcgcggcggcgaagtccgccgcgaacgtcgtcgcgttggcggcgt 1051 Query: 230 atgctcgcacgatcgcgtccgtgctgccgttgcccgcgccgctcccgtagagctcctggt 289 | || ||||||| |||||||||| |||| ||||| |||||||| ||| |||||||||||| Sbjct: 1050 acgcgcgcacgaacgcgtccgtggtgccattgccggcgccgctgccgaagagctcctggt 991 Query: 290 cggaccgcaggagcacgcggcgagcgacgaggtcctggaagtagccgttgtcgaatgcgg 349 |||| ||||| || |||||||| || ||||||| ||||||| |||||||||| | | Sbjct: 990 cggagcgcagcaggacgcggcggctgaggaggtccgtgaagtaggcgttgtcgaaggtgt 931 Query: 350 agggggcgcgcagctcgagcggcgcgaggtttccgtcaccgccggcggaagggcaggcct 409 ||| || |||||||||||||||||||||| ||||| ||||||| || ||||||| || Sbjct: 930 tgggcgcctgcagctcgagcggcgcgaggttgccgtcgccgccggtggtcgggcaggact 871 Query: 410 tgg 412 ||| Sbjct: 870 tgg 868
>dbj|AK060687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-H05, full insert sequence Length = 1183 Score = 224 bits (113), Expect = 2e-55 Identities = 256/303 (84%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 113 agttcactcgccggcagtttagccggacttcgccgttcttcccggtgagcgc---caggt 169 ||||||||||||||||||| | ||| || |||||||||||||||||||||| ||||| Sbjct: 1077 agttcactcgccggcagttgatccgtacctcgccgttcttcccggtgagcgggctcaggt 1018 Query: 170 tgcccatcctcaccatggcggcggcgaagtctaccgcgaagagcgtggcgttggcggcgt 229 |||||| ||||||||| |||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 1017 tgcccagcctcaccatcgcggcggcgaagtccgccgcgaacgtcgtcgcgttggcggcgt 958 Query: 230 atgctcgcacgatcgcgtccgtgctgccgttgcccgcgccgctcccgtagagctcctggt 289 | || ||||||| |||||||||| |||| ||||| |||||||| ||| |||||||||||| Sbjct: 957 acgcgcgcacgaacgcgtccgtggtgccattgccggcgccgctgccgaagagctcctggt 898 Query: 290 cggaccgcaggagcacgcggcgagcgacgaggtcctggaagtagccgttgtcgaatgcgg 349 |||| ||||| || |||||||| || ||||||| ||||||| |||||||||| | | Sbjct: 897 cggagcgcagcaggacgcggcggctgaggaggtccgtgaagtaggcgttgtcgaaggtgt 838 Query: 350 agggggcgcgcagctcgagcggcgcgaggtttccgtcaccgccggcggaagggcaggcct 409 ||| || |||||||||||||||||||||| ||||| ||||||| || ||||||| || Sbjct: 837 tgggcgcctgcagctcgagcggcgcgaggttgccgtcgccgccggtggtcgggcaggact 778 Query: 410 tgg 412 ||| Sbjct: 777 tgg 775
>tpe|BN000531.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx2 gene for class III peroxidase 2 precursor, exons 1-3 Length = 1105 Score = 224 bits (113), Expect = 2e-55 Identities = 256/303 (84%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 113 agttcactcgccggcagtttagccggacttcgccgttcttcccggtgagcgc---caggt 169 ||||||||||||||||||| | ||| || |||||||||||||||||||||| ||||| Sbjct: 1097 agttcactcgccggcagttgatccgtacctcgccgttcttcccggtgagcgggctcaggt 1038 Query: 170 tgcccatcctcaccatggcggcggcgaagtctaccgcgaagagcgtggcgttggcggcgt 229 |||||| ||||||||| |||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 1037 tgcccagcctcaccatcgcggcggcgaagtccgccgcgaacgtcgtcgcgttggcggcgt 978 Query: 230 atgctcgcacgatcgcgtccgtgctgccgttgcccgcgccgctcccgtagagctcctggt 289 | || ||||||| |||||||||| |||| ||||| |||||||| ||| |||||||||||| Sbjct: 977 acgcgcgcacgaacgcgtccgtggtgccattgccggcgccgctgccgaagagctcctggt 918 Query: 290 cggaccgcaggagcacgcggcgagcgacgaggtcctggaagtagccgttgtcgaatgcgg 349 |||| ||||| || |||||||| || ||||||| ||||||| |||||||||| | | Sbjct: 917 cggagcgcagcaggacgcggcggctgaggaggtccgtgaagtaggcgttgtcgaaggtgt 858 Query: 350 agggggcgcgcagctcgagcggcgcgaggtttccgtcaccgccggcggaagggcaggcct 409 ||| || |||||||||||||||||||||| ||||| ||||||| || ||||||| || Sbjct: 857 tgggcgcctgcagctcgagcggcgcgaggttgccgtcgccgccggtggtcgggcaggact 798 Query: 410 tgg 412 ||| Sbjct: 797 tgg 795
>gb|AY206411.1| Ipomoea batatas anionic peroxidase swpa6 mRNA, complete cds Length = 1284 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 163 gccaggttgcccatcctcaccatggcggcggcgaagtc 200 ||||||||||||||| | |||||||||||||||||||| Sbjct: 1023 gccaggttgcccatcttgaccatggcggcggcgaagtc 986
>emb|Z84472.1|IBPA1 I.batatas mRNA for anionic peroxidase Length = 1380 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 165 caggttgcccatcctcaccatggcggcggcgaagtc 200 |||||||| |||| |||||||||||||||||||||| Sbjct: 1029 caggttgctcatcttcaccatggcggcggcgaagtc 994
>gb|AF109123.1|AF109123 Ipomoea batatas anionic peroxidase Swpa3 (swpa3) mRNA, complete cds Length = 1310 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 165 caggttgcccatcctcaccatggcggcggcgaagtc 200 |||||||| |||| |||||||||||||||||||||| Sbjct: 1018 caggttgctcatcttcaccatggcggcggcgaagtc 983
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaa 197 |||||||||| ||||||||||||||||||| Sbjct: 107520 gttgcccatcttcaccatggcggcggcgaa 107491 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 166 aggttgcccatcctcaccatggcggcggcgaa 197 |||||||||||| | ||||||||||||||||| Sbjct: 95438 aggttgcccatcttgaccatggcggcggcgaa 95407
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaa 197 |||||||||| ||||||||||||||||||| Sbjct: 2014643 gttgcccatcttcaccatggcggcggcgaa 2014614 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 166 aggttgcccatcctcaccatggcggcggcgaa 197 |||||||||||| | ||||||||||||||||| Sbjct: 2002561 aggttgcccatcttgaccatggcggcggcgaa 2002530 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 18156459 gagcacgcggcgagcgacga 18156478
>tpe|BN000599.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx70 gene for class III peroxidase 70 precursor, exons 1-2 Length = 1356 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaa 197 |||||||||| ||||||||||||||||||| Sbjct: 1287 gttgcccatcttcaccatggcggcggcgaa 1258
>ref|XM_479517.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1229 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaagtc 200 |||||||||| |||||||||||||| ||||||| Sbjct: 975 gttgcccatcttcaccatggcggcgccgaagtc 943
>emb|Z84473.1|IBPN1 I.batatas mRNa for neutral peroxidase Length = 1282 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaagtc 200 ||||| |||| |||||||||||||||||||||| Sbjct: 1026 gttgctcatcttcaccatggcggcggcgaagtc 994
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 168 gttgcccatcctcaccatggcggcggcgaagtc 200 |||||||||| |||||||||||||| ||||||| Sbjct: 28637305 gttgcccatcttcaccatggcggcgccgaagtc 28637337
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 168 gttgcccatcctcaccatggcggcggcgaagtc 200 |||||||||| |||||||||||||| ||||||| Sbjct: 103263 gttgcccatcttcaccatggcggcgccgaagtc 103295
>dbj|AK060984.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B02, full insert sequence Length = 1229 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaagtc 200 |||||||||| |||||||||||||| ||||||| Sbjct: 975 gttgcccatcttcaccatggcggcgccgaagtc 943
>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1409_C08 Length = 90673 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 168 gttgcccatcctcaccatggcggcggcgaagtc 200 |||||||||| |||||||||||||| ||||||| Sbjct: 12475 gttgcccatcttcaccatggcggcgccgaagtc 12507
>gb|AY107804.1| Zea mays PCO104850 mRNA sequence Length = 1303 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 166 aggttgcccatcctcaccatggcggcggcgaag 198 |||||||||||| |||||||||| ||||||||| Sbjct: 1018 aggttgcccatcttcaccatggccgcggcgaag 986
>tpe|BN000644.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx115 gene for class III peroxidase 115 precursor, exons 1-3 Length = 1751 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaagtc 200 |||||||||| |||||||||||||| ||||||| Sbjct: 1688 gttgcccatcttcaccatggcggcgccgaagtc 1656
>ref|NM_183630.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 166 aggttgcccatcctcaccatggcggcggcgaa 197 |||||||||||| | ||||||||||||||||| Sbjct: 953 aggttgcccatcttgaccatggcggcggcgaa 922
>gb|AF453791.1| Ipomoea batatas anionic peroxidase (POD) gene, promoter region and partial cds Length = 3741 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 165 caggttgcccatcctcaccatggcggcggcgaagtc 200 |||||||| |||| | |||||||||||||||||||| Sbjct: 3665 caggttgctcatcttgaccatggcggcggcgaagtc 3630
>dbj|AP002820.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702D12 Length = 137332 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 166 aggttgcccatcctcaccatggcggcggcgaa 197 |||||||||||| | ||||||||||||||||| Sbjct: 2423 aggttgcccatcttgaccatggcggcggcgaa 2454
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 166 aggttgcccatcctcaccatggcggcggcgaa 197 |||||||||||| | ||||||||||||||||| Sbjct: 174232 aggttgcccatcttgaccatggcggcggcgaa 174263
>gb|AF109124.1|AF109124 Ipomoea batatas anionic peroxidase swpa2 (swpa2) mRNA, complete cds Length = 1291 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 165 caggttgcccatcctcaccatggcggcggcgaagtc 200 |||||||| |||| | |||||||||||||||||||| Sbjct: 1047 caggttgctcatcttgaccatggcggcggcgaagtc 1012
>tpe|BN000598.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx69 gene for class III peroxidase 69 precursor, exons 1-2 Length = 1108 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 166 aggttgcccatcctcaccatggcggcggcgaa 197 |||||||||||| | ||||||||||||||||| Sbjct: 1050 aggttgcccatcttgaccatggcggcggcgaa 1019
>tpe|BN000535.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx6 gene for class III peroxidase 6 precursor, exons 1-2 Length = 6015 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 166 aggttgcccatcctcaccatggcggcggcgaa 197 |||||||||||| | ||||||||||||||||| Sbjct: 5957 aggttgcccatcttgaccatggcggcggcgaa 5926
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Plus Query: 170 tgcccatcctcaccatggcggcggcgaagtc 200 |||||||| |||||||||||||| ||||||| Sbjct: 4652361 tgcccatcttcaccatggcggcgacgaagtc 4652391 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 agagcgtggcgttggcggcgt 229 ||||||||||||||||||||| Sbjct: 27511085 agagcgtggcgttggcggcgt 27511065
>dbj|AK061040.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-D01, full insert sequence Length = 1132 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Minus Query: 170 tgcccatcctcaccatggcggcggcgaagtc 200 |||||||| |||||||||||||| ||||||| Sbjct: 977 tgcccatcttcaccatggcggcgacgaagtc 947
>tpe|BN000666.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx137 gene for class III peroxidase 137 precursor, exons 1-4 Length = 1273 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Minus Query: 170 tgcccatcctcaccatggcggcggcgaagtc 200 |||||||| |||||||||||||| ||||||| Sbjct: 1205 tgcccatcttcaccatggcggcgacgaagtc 1175
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Plus Query: 170 tgcccatcctcaccatggcggcggcgaagtc 200 |||||||| |||||||||||||| ||||||| Sbjct: 4652342 tgcccatcttcaccatggcggcgacgaagtc 4652372 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 agagcgtggcgttggcggcgt 229 ||||||||||||||||||||| Sbjct: 27436643 agagcgtggcgttggcggcgt 27436623
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147355 Score = 46.1 bits (23), Expect = 0.090 Identities = 29/31 (93%) Strand = Plus / Minus Query: 170 tgcccatcctcaccatggcggcggcgaagtc 200 |||||||| |||||||||||||| ||||||| Sbjct: 99766 tgcccatcttcaccatggcggcgacgaagtc 99736
>ref|NM_187572.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 873 gcccatcttgaccatggcggcggcgaagtc 844
>ref|NM_187575.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 960 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 cccatcctcaccatggcggcggcgaa 197 |||||| ||||||||||||||||||| Sbjct: 896 cccatcttcaccatggcggcggcgaa 871
>ref|NM_197545.1| Oryza sativa (japonica cultivar-group) putative peroxidase (OSJNBa0040D23.2), mRNA Length = 1204 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 1008 gcccatcttgaccatggcggcggcgaagtc 979
>ref|NM_183812.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaa 197 |||||||||| ||||||||||| ||||||| Sbjct: 903 gttgcccatcttcaccatggcgtcggcgaa 874
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 gaagagcgtggcgttggcggcg 228 |||||||||||||||||||||| Sbjct: 55339 gaagagcgtggcgttggcggcg 55360
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 12591322 gcccatgcgcaccatggcggcggcgaagtc 12591293 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 cccatcctcaccatggcggcggcgaa 197 |||||| ||||||||||||||||||| Sbjct: 1170547 cccatcttcaccatggcggcggcgaa 1170572 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 1152345 gcccatcttgaccatggcggcggcgaagtc 1152374
>ref|XM_817118.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0097) partial mRNA Length = 14718 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gaagagcgtggcgttggcggcg 228 |||||||||||||||||||||| Sbjct: 3297 gaagagcgtggcgttggcggcg 3276
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 85667 gcccatgcgcaccatggcggcggcgaagtc 85696
>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete sequence Length = 105841 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 98352 gcccatcttgaccatggcggcggcgaagtc 98323 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaag 198 ||||||| | |||||||||||||||||| Sbjct: 93100 gcccatcttgaccatggcggcggcgaag 93073
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 22998 gcccatcttgaccatggcggcggcgaagtc 22969 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaag 198 ||||||| | |||||||||||||||||| Sbjct: 17746 gcccatcttgaccatggcggcggcgaag 17719
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence Length = 100986 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 cccatcctcaccatggcggcggcgaa 197 |||||| ||||||||||||||||||| Sbjct: 74251 cccatcttcaccatggcggcggcgaa 74276 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 56049 gcccatcttgaccatggcggcggcgaagtc 56078
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 ccgcgaagagcgtggcgttggcggcg 228 |||||||||||| ||||||||||||| Sbjct: 2735753 ccgcgaagagcgcggcgttggcggcg 2735728
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 20382850 gcccatcttgaccatggcggcggcgaagtc 20382821 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaag 198 ||||||| | |||||||||||||||||| Sbjct: 20377598 gcccatcttgaccatggcggcggcgaag 20377571 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cgtcaccgccggcggaagggcagg 406 |||||||||||||||| ||||||| Sbjct: 19594737 cgtcaccgccggcggatgggcagg 19594760
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 12588085 gcccatgcgcaccatggcggcggcgaagtc 12588056 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 cccatcctcaccatggcggcggcgaa 197 |||||| ||||||||||||||||||| Sbjct: 1170545 cccatcttcaccatggcggcggcgaa 1170570 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 1152343 gcccatcttgaccatggcggcggcgaagtc 1152372
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaa 197 |||||||||| ||||||||||| ||||||| Sbjct: 13285 gttgcccatcttcaccatggcgtcggcgaa 13256
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaa 197 |||||||||| ||||||||||| ||||||| Sbjct: 87290 gttgcccatcttcaccatggcgtcggcgaa 87261
>dbj|AK106109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D07, full insert sequence Length = 1270 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 991 gcccatgcgcaccatggcggcggcgaagtc 962
>dbj|AK105708.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E05, full insert sequence Length = 1422 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 1117 gcccatcttgaccatggcggcggcgaagtc 1088
>dbj|AK104573.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-H05, full insert sequence Length = 1265 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 991 gcccatgcgcaccatggcggcggcgaagtc 962
>dbj|AK104508.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G09, full insert sequence Length = 1270 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 991 gcccatgcgcaccatggcggcggcgaagtc 962
>dbj|AK104644.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G05, full insert sequence Length = 1270 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 991 gcccatgcgcaccatggcggcggcgaagtc 962
>dbj|AK104494.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C02, full insert sequence Length = 1252 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 991 gcccatgcgcaccatggcggcggcgaagtc 962
>dbj|AK104487.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B03, full insert sequence Length = 1215 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 991 gcccatgcgcaccatggcggcggcgaagtc 962
>dbj|AK104470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D07, full insert sequence Length = 1270 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 991 gcccatgcgcaccatggcggcggcgaagtc 962
>dbj|AK104395.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C06, full insert sequence Length = 1270 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 991 gcccatgcgcaccatggcggcggcgaagtc 962
>dbj|AK104156.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-C01, full insert sequence Length = 1264 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 988 gcccatgcgcaccatggcggcggcgaagtc 959
>dbj|AK103660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135H09, full insert sequence Length = 1506 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 1095 gcccatcttgaccatggcggcggcgaagtc 1066
>dbj|AK073847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069F06, full insert sequence Length = 1491 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 1095 gcccatcttgaccatggcggcggcgaagtc 1066
>dbj|AK067107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094O18, full insert sequence Length = 1263 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 987 gcccatgcgcaccatggcggcggcgaagtc 958
>dbj|AK063587.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A08, full insert sequence Length = 826 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaa 197 |||||||||| ||| ||||||||||||||| Sbjct: 566 gttgcccatcttcagcatggcggcggcgaa 537
>dbj|AK061545.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A04, full insert sequence Length = 1031 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 755 gcccatgcgcaccatggcggcggcgaagtc 726
>dbj|AK060028.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F06, full insert sequence Length = 1147 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 799 gcccatcttgaccatggcggcggcgaagtc 770
>dbj|AK058883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B11, full insert sequence Length = 1144 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaa 197 |||||||||| ||||||||||| ||||||| Sbjct: 702 gttgcccatcttcaccatggcgtcggcgaa 673
>gb|AY108615.1| Zea mays PCO132912 mRNA sequence Length = 1231 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 909 gcccatcttgaccatggcggcggcgaagtc 880
>tpe|BN000657.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx128 gene for class III peroxidase 128 precursor, exons 1-3 Length = 1794 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 1734 gcccatcttgaccatggcggcggcgaagtc 1705
>tpe|BN000570.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx41 gene for class III peroxidase 41 precursor, exons 1-4 Length = 5018 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 |||||| | ||||||||||||||||||||| Sbjct: 4955 gcccatgcgcaccatggcggcggcgaagtc 4926
>tpe|BN000564.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx35 gene for class III peroxidase 35 precursor, exons 1-2 Length = 1031 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 cccatcctcaccatggcggcggcgaa 197 |||||| ||||||||||||||||||| Sbjct: 967 cccatcttcaccatggcggcggcgaa 942
>tpe|BN000562.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx33 gene for class III peroxidase 33 precursor, exons 1-3 Length = 3361 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 3298 gcccatcttgaccatggcggcggcgaagtc 3269
>tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx13 gene for class III peroxidase 13 precursor, exons 1-3 Length = 9315 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 168 gttgcccatcctcaccatggcggcggcgaa 197 |||||||||| ||||||||||| ||||||| Sbjct: 9174 gttgcccatcttcaccatggcgtcggcgaa 9145
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaagtc 200 ||||||| | |||||||||||||||||||| Sbjct: 20394122 gcccatcttgaccatggcggcggcgaagtc 20394093 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaag 198 ||||||| | |||||||||||||||||| Sbjct: 20388870 gcccatcttgaccatggcggcggcgaag 20388843 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cgtcaccgccggcggaagggcagg 406 |||||||||||||||| ||||||| Sbjct: 19606013 cgtcaccgccggcggatgggcagg 19606036
>gb|AF049881.1|AF049881 Linum usitatissimum peroxidase FLXPER4 (PER4) mRNA, partial cds Length = 1176 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 172 cccatcctcaccatggcggcggcgaa 197 |||||||||||||| ||||||||||| Sbjct: 854 cccatcctcaccatagcggcggcgaa 829
>dbj|AB023289.1| Pseudomonas fluorescens Has exporter genes, complete cds Length = 11273 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 376 aggtttccgtcaccgccggcgg 397 |||||||||||||||||||||| Sbjct: 2016 aggtttccgtcaccgccggcgg 1995
>gb|AY857758.1| Triticum monococcum peroxidase 4 (POX4) mRNA, complete cds Length = 1281 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 166 aggttgcccatcctcaccatggcggcggcgaag 198 ||||| |||||| |||||||||||| ||||||| Sbjct: 938 aggttccccatcttcaccatggcggaggcgaag 906
>emb|Z99773.1|CEH06A10 Caenorhabditis elegans Fosmid H06A10, complete sequence Length = 11442 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 agaaaatccagtgctcgaaca 23 ||||||||||||||||||||| Sbjct: 10406 agaaaatccagtgctcgaaca 10426
>gb|AF083878.1|AF083878 Caenorhabditis elegans cyclin-dependent kinase CDK-4 (cdk-4) mRNA, complete cds Length = 1253 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 agaaaatccagtgctcgaaca 23 ||||||||||||||||||||| Sbjct: 479 agaaaatccagtgctcgaaca 459
>ref|NM_001029420.1| Caenorhabditis elegans Cyclin-Dependent Kinase family member (cdk-4) (cdk-4) mRNA, complete cds Length = 1221 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 agaaaatccagtgctcgaaca 23 ||||||||||||||||||||| Sbjct: 671 agaaaatccagtgctcgaaca 651
>ref|NM_077855.3| Caenorhabditis elegans Cyclin-Dependent Kinase family member (cdk-4) (cdk-4) mRNA, complete cds Length = 1226 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 agaaaatccagtgctcgaaca 23 ||||||||||||||||||||| Sbjct: 479 agaaaatccagtgctcgaaca 459
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 agagcgtggcgttggcggcgt 229 ||||||||||||||||||||| Sbjct: 86999 agagcgtggcgttggcggcgt 86979
>emb|BX664710.2|CNS09SC0 Oryza sativa chromosome 12, . PAC P0243A04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 78611 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 agagcgtggcgttggcggcgt 229 ||||||||||||||||||||| Sbjct: 55909 agagcgtggcgttggcggcgt 55929
>gb|AY206409.1| Ipomoea batatas anionic peroxidase swpa4 mRNA, complete cds Length = 1283 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 catcctcaccatggcggcggcgaa 197 |||| ||||||||||||||||||| Sbjct: 1020 catcttcaccatggcggcggcgaa 997
>ref|NM_197544.1| Oryza sativa (japonica cultivar-group) putative peroxidase (OSJNBb0060I05.15), mRNA Length = 957 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaag 198 ||||||| | |||||||||||||||||| Sbjct: 897 gcccatcttgaccatggcggcggcgaag 870
>ref|NM_191399.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 892 gagcacgcggcgagcgacga 911
>gb|AY751451.1| Panicum virgatum cultivar Nebraska-28 genomic sequence Length = 382 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 170 tgcccatcctcaccatggcggcggcgaagtct 201 |||||||| ||||||||| |||||||||||| Sbjct: 370 tgcccatcttcaccatggacgcggcgaagtct 339
>gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B11, complete sequence Length = 103615 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 37641 gagcacgcggcgagcgacga 37660
>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21, complete sequence Length = 139074 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 123714 gagcacgcggcgagcgacga 123733
>ref|XM_429345.1| PREDICTED: Gallus gallus LOC415685 (LOC415685), mRNA Length = 662 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 ggcgcgcagctcgagcggcgcgag 377 ||||||||||||||| |||||||| Sbjct: 5 ggcgcgcagctcgagaggcgcgag 28
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cgaacaccagcgcccatttg 37 |||||||||||||||||||| Sbjct: 5137724 cgaacaccagcgcccatttg 5137743
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 cgaacaccagcgcccatttg 37 |||||||||||||||||||| Sbjct: 5033027 cgaacaccagcgcccatttg 5033046
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cgaacaccagcgcccatttg 37 |||||||||||||||||||| Sbjct: 2955590 cgaacaccagcgcccatttg 2955571
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 gagcgacgaggtcctggaag 330 |||||||||||||||||||| Sbjct: 215714 gagcgacgaggtcctggaag 215733
>emb|BX294156.1| Pirellula sp. strain 1 complete genome; segment 24/24 Length = 179576 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 cgatcgcgtccgtgctgccgttgc 262 ||||||| |||||||||||||||| Sbjct: 38964 cgatcgcctccgtgctgccgttgc 38941
>emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06, complete sequence Length = 174570 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 88891 gagcacgcggcgagcgacga 88872
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 109263 gagcacgcggcgagcgacga 109244 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 99154 gagcacgcggcgagcgacga 99135
>tpg|BK000863.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M261, complete sequence Length = 6209 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 3171 gagcacgcggcgagcgacga 3190
>gb|AC093718.3| Homo sapiens 12 BAC RP11-742C6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160904 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tgattctactcattcagctc 112 |||||||||||||||||||| Sbjct: 82939 tgattctactcattcagctc 82958
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cgtcaccgccggcggaagggcagg 406 |||||||||||||||| ||||||| Sbjct: 51928 cgtcaccgccggcggatgggcagg 51951
>gb|AC067751.7| Homo sapiens chromosome 10 clone RP11-357K14, complete sequence Length = 180882 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 catttgtatctttgtcaata 51 |||||||||||||||||||| Sbjct: 42947 catttgtatctttgtcaata 42966
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 27946410 gagcacgcggcgagcgacga 27946391 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 27936301 gagcacgcggcgagcgacga 27936282 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 26867831 gagcacgcggcgagcgacga 26867812 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 24424907 gagcacgcggcgagcgacga 24424926
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 15852158 gagcacgcggcgagcgacga 15852177
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 165 caggttgcccatcctcaccatggcggcggcgaagtc 200 ||||||||||||| | |||||||||| | ||||||| Sbjct: 20357887 caggttgcccatcttgaccatggcggagacgaagtc 20357922
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 367 agcggcgcgaggtttccgtcaccgccgg 394 |||||||||||||| ||||| ||||||| Sbjct: 7769888 agcggcgcgaggttgccgtcgccgccgg 7769861
>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1143G03 Length = 137770 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 78744 gagcacgcggcgagcgacga 78763
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 165 caggttgcccatcctcaccatggcggcggcgaagtc 200 ||||||||||||| | |||||||||| | ||||||| Sbjct: 81282 caggttgcccatcttgaccatggcggagacgaagtc 81317
>dbj|AP003991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_A12 Length = 149089 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 367 agcggcgcgaggtttccgtcaccgccgg 394 |||||||||||||| ||||| ||||||| Sbjct: 106153 agcggcgcgaggttgccgtcgccgccgg 106126
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 137344 gagcacgcggcgagcgacga 137363
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 15284 gagcacgcggcgagcgacga 15303
>dbj|AP005698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0006L10 Length = 171115 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 367 agcggcgcgaggtttccgtcaccgccgg 394 |||||||||||||| ||||| ||||||| Sbjct: 10251 agcggcgcgaggttgccgtcgccgccgg 10224
>dbj|AK121950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J23, full insert sequence Length = 1345 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 165 caggttgcccatcctcaccatggcggcggcgaagtc 200 ||||||||||||| | |||||||||| | ||||||| Sbjct: 1016 caggttgcccatcttgaccatggcggagacgaagtc 981
>tpe|BN000656.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx127 gene for class III peroxidase 127 precursor, exons 1-3 Length = 1127 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 gcccatcctcaccatggcggcggcgaag 198 ||||||| | |||||||||||||||||| Sbjct: 1067 gcccatcttgaccatggcggcggcgaag 1040
>tpe|BN000615.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx86 gene for class III peroxidase 86 precursor, exons 1-3 Length = 1188 Score = 40.1 bits (20), Expect = 5.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 165 caggttgcccatcctcaccatggcggcggcgaagtc 200 ||||||||||||| | |||||||||| | ||||||| Sbjct: 1131 caggttgcccatcttgaccatggcggagacgaagtc 1096
>tpe|BN000554.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx25 gene for class III peroxidase 25 precursor, exon 1 Length = 1017 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 367 agcggcgcgaggtttccgtcaccgccgg 394 |||||||||||||| ||||| ||||||| Sbjct: 752 agcggcgcgaggttgccgtcgccgccgg 725
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gagcacgcggcgagcgacga 319 |||||||||||||||||||| Sbjct: 18229 gagcacgcggcgagcgacga 18248 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,581,061 Number of Sequences: 3902068 Number of extensions: 2581061 Number of successful extensions: 54285 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52986 Number of HSP's gapped (non-prelim): 1284 length of query: 416 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 394 effective length of database: 17,147,199,772 effective search space: 6755996710168 effective search space used: 6755996710168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
