ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbast73d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479524.1| Oryza sativa (japonica cultivar-group), mRNA 165 2e-37
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
3dbj|AK072868.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
4dbj|AK059418.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
5dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
6gb|AY107513.1| Zea mays PCO092477 mRNA sequence 125 1e-25
7ref|XM_479525.1| Oryza sativa (japonica cultivar-group), mRNA 109 8e-21
8dbj|AK058819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
9ref|XM_503624.1| Yarrowia lipolytica CLIB122, YALI0E06391g predi... 46 0.10
10gb|AC104894.14| Mus musculus chromosome 1, clone RP23-290I22, co... 46 0.10
11emb|AL121767.6|CNS01DSC Human chromosome 14 DNA sequence BAC C-2... 46 0.10
12emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-3... 46 0.10
13emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 46 0.10
14gb|AC157811.3| Mus musculus chromosome 1, clone RP24-377C24, com... 46 0.10
15gb|AY110373.1| Zea mays CL46074_1 mRNA sequence 44 0.40
16gb|AC146602.3| Mus musculus BAC clone RP23-309L12 from chromosom... 42 1.6
17emb|Z81495.1|CEF08G2 Caenorhabditis elegans Cosmid F08G2, comple... 42 1.6
18gb|AC125056.3| Mus musculus BAC clone RP23-398G2 from chromosome... 42 1.6
19emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 42 1.6
20gb|AC004668.1| Homo sapiens BAC clone CTA-276O3 from 7, complete... 42 1.6
21gb|AC098718.5| Mus musculus BAC clone RP23-2K11 from chromosome ... 42 1.6
22ref|XM_483173.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
23gb|AC113092.25| Mus musculus chromosome 6, clone RP23-309N11, co... 40 6.3
24gb|AY611646.1| Penicillium verruculosum carbon catabolite repres... 40 6.3
25ref|XM_545462.2| PREDICTED: Canis familiaris similar to Gamma-am... 40 6.3
26gb|BT011337.1| Drosophila melanogaster RH70503 full insert cDNA 40 6.3
27emb|CR753817.13| Zebrafish DNA sequence from clone DKEY-195M11 i... 40 6.3
28emb|Z71261.1|CEF21C3 Caenorhabditis elegans Cosmid F21C3, comple... 40 6.3
29ref|XM_727384.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 6.3
30ref|XM_741157.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 6.3
31ref|XM_670824.1| Plasmodium berghei strain ANKA hypothetical pro... 40 6.3
32emb|Z95326.1|HS344F17 Human DNA sequence from clone RP3-344F17 o... 40 6.3
33gb|BT009953.1| Drosophila melanogaster RH40165 full insert cDNA 40 6.3
34emb|AL356103.8| Human DNA sequence from clone RP4-713A24 on chro... 40 6.3
35emb|AL031664.1|HS531H16 Human DNA sequence from clone RP4-531H16... 40 6.3
36emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 6.3
37emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 40 6.3
38gb|AY580314.1| Selaginella kraussiana putative xyloglucan endotr... 40 6.3
39gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 gen... 40 6.3
40gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell... 40 6.3
41gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswel... 40 6.3
42ref|NM_167924.1| Drosophila melanogaster CG13937-RC, transcript ... 40 6.3
43gb|AC157651.3| Mus musculus BAC clone RP24-363O21 from chromosom... 40 6.3
44ref|XM_392022.2| PREDICTED: Apis mellifera similar to CG10847-PB... 40 6.3
45dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
46dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
47gb|AC132361.4| Mus musculus BAC clone RP24-149E13 from chromosom... 40 6.3
48gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome... 40 6.3
49dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
50emb|BX546479.5| Human DNA sequence from clone RP11-438N17 on chr... 40 6.3
51emb|AL669967.12| Mouse DNA sequence from clone RP23-216M21 on ch... 40 6.3
52dbj|AK120408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
53dbj|AK107539.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
54gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 ... 40 6.3
55dbj|AP003397.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.3
56gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, r... 40 6.3
57gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
58gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, comple... 40 6.3
59gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, comple... 40 6.3
60gb|AC166173.3| Mus musculus BAC clone RP23-101K10 from chromosom... 40 6.3
61dbj|AB061316.1| Clostridium thermocellum cdp-ym4 gene for cellod... 40 6.3
62dbj|AB006822.1| Clostridium thermocellum DNA for cellodextrin ph... 40 6.3 
>ref|XM_479524.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2108

 Score =  165 bits (83), Expect = 2e-37
 Identities = 173/203 (85%)
 Strand = Plus / Minus

                                                                        
Query: 239  tgccaagcccagactatgtccttcagcgccggcctcatctcctggttaaagaccctctgg 298
            |||||||||||||||||||||||||  || || |||||||| ||||| |||||| |  ||
Sbjct: 1816 tgccaagcccagactatgtccttcaaagctggtctcatctcttggttcaagaccttacgg 1757

                                                                        
Query: 299  tactccagagtatcgccgtttgtcttcttcaactccacaagatggaagtcaggggtgacc 358
            || || || ||||| || ||||||||||| | |||||||||||| ||||  ||||| |||
Sbjct: 1756 tattcaagtgtatcaccatttgtcttctttagctccacaagatgaaagtttggggtaacc 1697

                                                                        
Query: 359  tcgaatatctcggcatcaatagacatgacgcctttccttccgggcttggagccttccatc 418
            ||||||||||| ||||||||   ||| || ||||||||||| ||||||||||||||||||
Sbjct: 1696 tcgaatatctctgcatcaatgcccataacacctttccttccaggcttggagccttccatc 1637

                                   
Query: 419  ttcaacatgccaccatccttctt 441
            |||||||  |||||||| |||||
Sbjct: 1636 ttcaacagtccaccatctttctt 1614
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  165 bits (83), Expect = 2e-37
 Identities = 173/203 (85%)
 Strand = Plus / Plus

                                                                            
Query: 239      tgccaagcccagactatgtccttcagcgccggcctcatctcctggttaaagaccctctgg 298
                |||||||||||||||||||||||||  || || |||||||| ||||| |||||| |  ||
Sbjct: 28673531 tgccaagcccagactatgtccttcaaagctggtctcatctcttggttcaagaccttacgg 28673590

                                                                            
Query: 299      tactccagagtatcgccgtttgtcttcttcaactccacaagatggaagtcaggggtgacc 358
                || || || ||||| || ||||||||||| | |||||||||||| ||||  ||||| |||
Sbjct: 28673591 tattcaagtgtatcaccatttgtcttctttagctccacaagatgaaagtttggggtaacc 28673650

                                                                            
Query: 359      tcgaatatctcggcatcaatagacatgacgcctttccttccgggcttggagccttccatc 418
                ||||||||||| ||||||||   ||| || ||||||||||| ||||||||||||||||||
Sbjct: 28673651 tcgaatatctctgcatcaatgcccataacacctttccttccaggcttggagccttccatc 28673710

                                       
Query: 419      ttcaacatgccaccatccttctt 441
                |||||||  |||||||| |||||
Sbjct: 28673711 ttcaacagtccaccatctttctt 28673733
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>dbj|AK072868.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141O10, full
            insert sequence
          Length = 2108

 Score =  165 bits (83), Expect = 2e-37
 Identities = 173/203 (85%)
 Strand = Plus / Minus

                                                                        
Query: 239  tgccaagcccagactatgtccttcagcgccggcctcatctcctggttaaagaccctctgg 298
            |||||||||||||||||||||||||  || || |||||||| ||||| |||||| |  ||
Sbjct: 1816 tgccaagcccagactatgtccttcaaagctggtctcatctcttggttcaagaccttacgg 1757

                                                                        
Query: 299  tactccagagtatcgccgtttgtcttcttcaactccacaagatggaagtcaggggtgacc 358
            || || || ||||| || ||||||||||| | |||||||||||| ||||  ||||| |||
Sbjct: 1756 tattcaagtgtatcaccatttgtcttctttagctccacaagatgaaagtttggggtaacc 1697

                                                                        
Query: 359  tcgaatatctcggcatcaatagacatgacgcctttccttccgggcttggagccttccatc 418
            ||||||||||| ||||||||   ||| || ||||||||||| ||||||||||||||||||
Sbjct: 1696 tcgaatatctctgcatcaatgcccataacacctttccttccaggcttggagccttccatc 1637

                                   
Query: 419  ttcaacatgccaccatccttctt 441
            |||||||  |||||||| |||||
Sbjct: 1636 ttcaacagtccaccatctttctt 1614
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>dbj|AK059418.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D08, full
            insert sequence
          Length = 1229

 Score =  165 bits (83), Expect = 2e-37
 Identities = 173/203 (85%)
 Strand = Plus / Minus

                                                                        
Query: 239  tgccaagcccagactatgtccttcagcgccggcctcatctcctggttaaagaccctctgg 298
            |||||||||||||||||||||||||  || || |||||||| ||||| |||||| |  ||
Sbjct: 1012 tgccaagcccagactatgtccttcaaagctggtctcatctcttggttcaagaccttacgg 953

                                                                        
Query: 299  tactccagagtatcgccgtttgtcttcttcaactccacaagatggaagtcaggggtgacc 358
            || || || ||||| || ||||||||||| | |||||||||||| ||||  ||||| |||
Sbjct: 952  tattcaagtgtatcaccatttgtcttctttagctccacaagatgaaagtttggggtaacc 893

                                                                        
Query: 359  tcgaatatctcggcatcaatagacatgacgcctttccttccgggcttggagccttccatc 418
            ||||||||||| ||||||||   ||| || ||||||||||| ||||||||||||||||||
Sbjct: 892  tcgaatatctctgcatcaatgcccataacacctttccttccaggcttggagccttccatc 833

                                   
Query: 419  ttcaacatgccaccatccttctt 441
            |||||||  |||||||| |||||
Sbjct: 832  ttcaacagtccaccatctttctt 810
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>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1409_C08
          Length = 90673

 Score =  165 bits (83), Expect = 2e-37
 Identities = 173/203 (85%)
 Strand = Plus / Plus

                                                                         
Query: 239   tgccaagcccagactatgtccttcagcgccggcctcatctcctggttaaagaccctctgg 298
             |||||||||||||||||||||||||  || || |||||||| ||||| |||||| |  ||
Sbjct: 48701 tgccaagcccagactatgtccttcaaagctggtctcatctcttggttcaagaccttacgg 48760

                                                                         
Query: 299   tactccagagtatcgccgtttgtcttcttcaactccacaagatggaagtcaggggtgacc 358
             || || || ||||| || ||||||||||| | |||||||||||| ||||  ||||| |||
Sbjct: 48761 tattcaagtgtatcaccatttgtcttctttagctccacaagatgaaagtttggggtaacc 48820

                                                                         
Query: 359   tcgaatatctcggcatcaatagacatgacgcctttccttccgggcttggagccttccatc 418
             ||||||||||| ||||||||   ||| || ||||||||||| ||||||||||||||||||
Sbjct: 48821 tcgaatatctctgcatcaatgcccataacacctttccttccaggcttggagccttccatc 48880

                                    
Query: 419   ttcaacatgccaccatccttctt 441
             |||||||  |||||||| |||||
Sbjct: 48881 ttcaacagtccaccatctttctt 48903
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>gb|AY107513.1| Zea mays PCO092477 mRNA sequence
          Length = 1254

 Score =  125 bits (63), Expect = 1e-25
 Identities = 174/211 (82%)
 Strand = Plus / Minus

                                                                        
Query: 231  gctcgccttgccaagcccagactatgtccttcagcgccggcctcatctcctggttaaaga 290
            |||| |||||||||||||| ||||| ||||| || || |||||||| || ||||| | ||
Sbjct: 1009 gctcaccttgccaagcccacactatttccttgagtgcgggcctcatttcttggttcagga 950

                                                                        
Query: 291  ccctctggtactccagagtatcgccgtttgtcttcttcaactccacaagatggaagtcag 350
            || | || ||||| ||||| ||||| || |||||||| | |||||||||||| |||| ||
Sbjct: 949  ccttttgatactctagagtgtcgccattcgtcttctttatctccacaagatgaaagttag 890

                                                                        
Query: 351  gggtgacctcgaatatctcggcatcaatagacatgacgcctttccttccgggcttggagc 410
            || | ||||| ||||  |||||||| |||  ||| || ||||||||||||||||| ||  
Sbjct: 889  ggctaacctcaaatacttcggcatcgatacccattacccctttccttccgggctttgaag 830

                                           
Query: 411  cttccatcttcaacatgccaccatccttctt 441
            |||||||||| ||||  ||||||||||||||
Sbjct: 829  cttccatctttaacaaaccaccatccttctt 799
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>ref|XM_479525.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1283

 Score =  109 bits (55), Expect = 8e-21
 Identities = 97/111 (87%)
 Strand = Plus / Minus

                                                                        
Query: 331  ctccacaagatggaagtcaggggtgacctcgaatatctcggcatcaatagacatgacgcc 390
            |||||||||||| ||||  ||||| |||||||||||||| ||||||||   ||| || ||
Sbjct: 1053 ctccacaagatgaaagtttggggtaacctcgaatatctctgcatcaatgcccataacacc 994

                                                               
Query: 391  tttccttccgggcttggagccttccatcttcaacatgccaccatccttctt 441
            ||||||||| |||||||||||||||||||||||||  |||||||| |||||
Sbjct: 993  tttccttccaggcttggagccttccatcttcaacagtccaccatctttctt 943



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 239  tgccaagcccagactatgtccttcagcgccggcctcatctcctggttaaagacc 292
            |||||||||||||||||||||||||  || || |||||||| ||||| ||||||
Sbjct: 1132 tgccaagcccagactatgtccttcaaagctggtctcatctcttggttcaagacc 1079
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>dbj|AK058819.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G04, full
            insert sequence
          Length = 1283

 Score =  109 bits (55), Expect = 8e-21
 Identities = 97/111 (87%)
 Strand = Plus / Minus

                                                                        
Query: 331  ctccacaagatggaagtcaggggtgacctcgaatatctcggcatcaatagacatgacgcc 390
            |||||||||||| ||||  ||||| |||||||||||||| ||||||||   ||| || ||
Sbjct: 1053 ctccacaagatgaaagtttggggtaacctcgaatatctctgcatcaatgcccataacacc 994

                                                               
Query: 391  tttccttccgggcttggagccttccatcttcaacatgccaccatccttctt 441
            ||||||||| |||||||||||||||||||||||||  |||||||| |||||
Sbjct: 993  tttccttccaggcttggagccttccatcttcaacagtccaccatctttctt 943



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 239  tgccaagcccagactatgtccttcagcgccggcctcatctcctggttaaagacc 292
            |||||||||||||||||||||||||  || || |||||||| ||||| ||||||
Sbjct: 1132 tgccaagcccagactatgtccttcaaagctggtctcatctcttggttcaagacc 1079
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>ref|XM_503624.1| Yarrowia lipolytica CLIB122, YALI0E06391g predicted mRNA
          Length = 1410

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 408 agccttccatcttcaacatgcca 430
           |||||||||||||||||||||||
Sbjct: 62  agccttccatcttcaacatgcca 84
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>gb|AC104894.14| Mus musculus chromosome 1, clone RP23-290I22, complete sequence
          Length = 185038

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 40    tttaaataaatctttcatcaaaa 62
             |||||||||||||||||||||||
Sbjct: 71431 tttaaataaatctttcatcaaaa 71453
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>emb|AL121767.6|CNS01DSC Human chromosome 14 DNA sequence BAC C-2593I21 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 208309

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 113    acaaacatggcataataaaaatt 135
              |||||||||||||||||||||||
Sbjct: 205415 acaaacatggcataataaaaatt 205393
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>emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-34O18 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168991

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 113   acaaacatggcataataaaaatt 135
             |||||||||||||||||||||||
Sbjct: 21201 acaaacatggcataataaaaatt 21179
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia
              lipolytica
          Length = 4224103

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 408    agccttccatcttcaacatgcca 430
              |||||||||||||||||||||||
Sbjct: 724271 agccttccatcttcaacatgcca 724293
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>gb|AC157811.3| Mus musculus chromosome 1, clone RP24-377C24, complete sequence
          Length = 188752

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 40    tttaaataaatctttcatcaaaa 62
             |||||||||||||||||||||||
Sbjct: 12895 tttaaataaatctttcatcaaaa 12873
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>gb|AY110373.1| Zea mays CL46074_1 mRNA sequence
          Length = 661

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 239 tgccaagcccagactatgtccttcag 264
           ||||| ||||||||||||||||||||
Sbjct: 274 tgccaggcccagactatgtccttcag 299
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>gb|AC146602.3| Mus musculus BAC clone RP23-309L12 from chromosome 14, complete sequence
          Length = 198097

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 114    caaacatggcataataaaaattaca 138
              |||||||||||||| ||||||||||
Sbjct: 183047 caaacatggcataaaaaaaattaca 183023
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>emb|Z81495.1|CEF08G2 Caenorhabditis elegans Cosmid F08G2, complete sequence
          Length = 30846

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 124  ataataaaaattacagaaaca 144
            |||||||||||||||||||||
Sbjct: 8621 ataataaaaattacagaaaca 8601
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>gb|AC125056.3| Mus musculus BAC clone RP23-398G2 from chromosome 14, complete sequence
          Length = 204350

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 114   caaacatggcataataaaaattaca 138
             |||||||||||||| ||||||||||
Sbjct: 92105 caaacatggcataaaaaaaattaca 92081
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 217    ctgctgcggctgcggctcgcc 237
              |||||||||||||||||||||
Sbjct: 212514 ctgctgcggctgcggctcgcc 212534
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>gb|AC004668.1| Homo sapiens BAC clone CTA-276O3 from 7, complete sequence
          Length = 112661

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 60    aaagatgataactgaagtttacaca 84
             |||||||| ||||||||||||||||
Sbjct: 61322 aaagatgaaaactgaagtttacaca 61346
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>gb|AC098718.5| Mus musculus BAC clone RP23-2K11 from chromosome 14, complete sequence
          Length = 199906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 114    caaacatggcataataaaaattaca 138
              |||||||||||||| ||||||||||
Sbjct: 145658 caaacatggcataaaaaaaattaca 145682
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>ref|XM_483173.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1364

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 218  tgctgcggctgcggctcgcc 237
            ||||||||||||||||||||
Sbjct: 1064 tgctgcggctgcggctcgcc 1045
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>gb|AC113092.25| Mus musculus chromosome 6, clone RP23-309N11, complete sequence
          Length = 186431

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 67     ataactgaagtttacacagacata 90
              |||| |||||||||||||||||||
Sbjct: 110304 ataaatgaagtttacacagacata 110327
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>gb|AY611646.1| Penicillium verruculosum carbon catabolite repressor (creA) gene,
            complete cds
          Length = 4522

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  attgctgctgcggctgcggc 232
            ||||||||||||||||||||
Sbjct: 3041 attgctgctgcggctgcggc 3060
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>ref|XM_545462.2| PREDICTED: Canis familiaris similar to Gamma-aminobutyric acid type
           B receptor, subunit 1 precursor (GABA-B receptor 1)
           (GABA-B-R1) (Gb1) (LOC488340), mRNA
          Length = 2949

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 333 ccacaagatggaagtcaggg 352
           ||||||||||||||||||||
Sbjct: 400 ccacaagatggaagtcaggg 381
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>gb|BT011337.1| Drosophila melanogaster RH70503 full insert cDNA
          Length = 1966

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 214 ttgctgctgcggctgcggct 233
           ||||||||||||||||||||
Sbjct: 712 ttgctgctgcggctgcggct 693
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>emb|CR753817.13| Zebrafish DNA sequence from clone DKEY-195M11 in linkage group 6,
              complete sequence
          Length = 236737

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     tttaaataaatctttcatca 59
              ||||||||||||||||||||
Sbjct: 195413 tttaaataaatctttcatca 195394
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>emb|Z71261.1|CEF21C3 Caenorhabditis elegans Cosmid F21C3, complete sequence
          Length = 26195

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   catgacgcctttccttccgg 401
             ||||||||||||||||||||
Sbjct: 11062 catgacgcctttccttccgg 11043
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>ref|XM_727384.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300663.00.0)
          partial mRNA
          Length = 261

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 31 accatgctttttaaataaatcttt 54
          |||||| |||||||||||||||||
Sbjct: 96 accatgttttttaaataaatcttt 73
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>ref|XM_741157.1| Plasmodium chabaudi chabaudi hypothetical protein (PC001374.02.0)
           partial mRNA
          Length = 681

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 31  accatgctttttaaataaatcttt 54
           |||||| |||||||||||||||||
Sbjct: 519 accatgttttttaaataaatcttt 496
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>ref|XM_670824.1| Plasmodium berghei strain ANKA hypothetical protein (PB000012.02.0)
           partial mRNA
          Length = 684

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 31  accatgctttttaaataaatcttt 54
           |||||| |||||||||||||||||
Sbjct: 519 accatgttttttaaataaatcttt 496
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>emb|Z95326.1|HS344F17 Human DNA sequence from clone RP3-344F17 on chromosome 6q22.1-22.33
             Contains part of the gene for a novel protein similar to
             FLJ13018 and other hypothetical proteins, complete
             sequence
          Length = 85832

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   ataaaaattacagaaacaca 146
             ||||||||||||||||||||
Sbjct: 84199 ataaaaattacagaaacaca 84218
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>gb|BT009953.1| Drosophila melanogaster RH40165 full insert cDNA
          Length = 1762

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 214 ttgctgctgcggctgcggct 233
           ||||||||||||||||||||
Sbjct: 510 ttgctgctgcggctgcggct 491
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>emb|AL356103.8| Human DNA sequence from clone RP4-713A24 on chromosome 1p22.2-31.1
             Contains STSs and GSSs, complete sequence
          Length = 112069

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 211   agattgctgctgcggctgcggctc 234
             |||||||||||||||| |||||||
Sbjct: 25083 agattgctgctgcggcggcggctc 25060
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>emb|AL031664.1|HS531H16 Human DNA sequence from clone RP4-531H16 on chromosome 20p11.22-12
              Contains the 3' end of the PCSK2 gene for proprotein
              convertase subtilisin/kexin type 2, the BFSP1 gene for
              beaded filament structural protein 1 (filensin), the TCTE1P
              gene for t-complex-associated-testis-expressed 1
              pseudogene, the  RPS27AP2 gene for ribosomal protein S27a
              pseudogene 2 and a CpG island, complete sequence
          Length = 155116

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    aaggaataacaaacatggca 124
              ||||||||||||||||||||
Sbjct: 150559 aaggaataacaaacatggca 150540
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 35      tgctttttaaataaatcttt 54
               ||||||||||||||||||||
Sbjct: 3136375 tgctttttaaataaatcttt 3136356
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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 437    ttcttgacgagcttcagctgcatg 460
              ||||||| ||||||||||||||||
Sbjct: 875277 ttcttgatgagcttcagctgcatg 875300
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>gb|AY580314.1| Selaginella kraussiana putative xyloglucan
           endotransglucosylase/hydrolase (XTH1) mRNA, complete cds
          Length = 849

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 442 gacgagcttcagctgcatgc 461
           ||||||||||||||||||||
Sbjct: 231 gacgagcttcagctgcatgc 212
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>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete
              sequence
          Length = 136120

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ttgctgctgcggctgcggct 233
              ||||||||||||||||||||
Sbjct: 115983 ttgctgctgcggctgcggct 116002
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>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 194006

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    ttgctgctgcggctgcggct 233
              ||||||||||||||||||||
Sbjct: 191215 ttgctgctgcggctgcggct 191196
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>gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ttgctgctgcggctgcggct 233
              ||||||||||||||||||||
Sbjct: 153990 ttgctgctgcggctgcggct 154009
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>ref|NM_167924.1| Drosophila melanogaster CG13937-RC, transcript variant C (CG13937),
           mRNA
          Length = 1728

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 214 ttgctgctgcggctgcggct 233
           ||||||||||||||||||||
Sbjct: 509 ttgctgctgcggctgcggct 490
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>gb|AC157651.3| Mus musculus BAC clone RP24-363O21 from chromosome 6, complete sequence
          Length = 171141

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    accctctggtactccagagt 309
              ||||||||||||||||||||
Sbjct: 137774 accctctggtactccagagt 137755
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>ref|XM_392022.2| PREDICTED: Apis mellifera similar to CG10847-PB, isoform B
            (LOC408476), mRNA
          Length = 4064

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 214  ttgctgctgcggctgcggct 233
            ||||||||||||||||||||
Sbjct: 2490 ttgctgctgcggctgcggct 2471
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 214      ttgctgctgcggctgcggct 233
                ||||||||||||||||||||
Sbjct: 18390710 ttgctgctgcggctgcggct 18390691
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 218      tgctgcggctgcggctcgcc 237
                ||||||||||||||||||||
Sbjct: 24614438 tgctgcggctgcggctcgcc 24614457
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>gb|AC132361.4| Mus musculus BAC clone RP24-149E13 from chromosome 1, complete sequence
          Length = 158837

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    accatgctttttaaataaat 50
             ||||||||||||||||||||
Sbjct: 89134 accatgctttttaaataaat 89153
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>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence
          Length = 226264

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    tttttaaataaatctttcat 57
             ||||||||||||||||||||
Sbjct: 91966 tttttaaataaatctttcat 91947
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>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0026F07
          Length = 137354

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    tgctgcggctgcggctcgcc 237
              ||||||||||||||||||||
Sbjct: 122698 tgctgcggctgcggctcgcc 122717
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>emb|BX546479.5| Human DNA sequence from clone RP11-438N17 on chromosome 22, complete
            sequence
          Length = 172294

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   cgaggggaatggaaaggaat 111
            ||||||||||||||||||||
Sbjct: 3874 cgaggggaatggaaaggaat 3855
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>emb|AL669967.12| Mouse DNA sequence from clone RP23-216M21 on chromosome X, complete
             sequence
          Length = 219583

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   gaaaggaataacaaacatgg 122
             ||||||||||||||||||||
Sbjct: 84808 gaaaggaataacaaacatgg 84789
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>dbj|AK120408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M08, full
           insert sequence
          Length = 3407

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 214 ttgctgctgcggctgcggct 233
           ||||||||||||||||||||
Sbjct: 172 ttgctgctgcggctgcggct 153
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>dbj|AK107539.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-H07, full
            insert sequence
          Length = 1363

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 218  tgctgcggctgcggctcgcc 237
            ||||||||||||||||||||
Sbjct: 1063 tgctgcggctgcggctcgcc 1044
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>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete
             sequence
          Length = 315108

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   ttgctgctgcggctgcggct 233
             ||||||||||||||||||||
Sbjct: 40680 ttgctgctgcggctgcggct 40699
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>dbj|AP003397.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1007G5, complete
             sequences
          Length = 184643

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tgctttttaaataaatcttt 54
             ||||||||||||||||||||
Sbjct: 60888 tgctttttaaataaatcttt 60869
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>gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, region 62B8-62B11, P1 clone
             DS04710, complete sequence
          Length = 72327

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   ttgctgctgcggctgcggct 233
             ||||||||||||||||||||
Sbjct: 12204 ttgctgctgcggctgcggct 12223
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 214      ttgctgctgcggctgcggct 233
                ||||||||||||||||||||
Sbjct: 18400763 ttgctgctgcggctgcggct 18400744
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>gb|AC144778.3| Mus musculus BAC clone RP23-278A22 from 6, complete sequence
          Length = 187115

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   accctctggtactccagagt 309
             ||||||||||||||||||||
Sbjct: 54394 accctctggtactccagagt 54375
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>gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, complete sequence
          Length = 208906

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   tccatcttcaacatgccacc 432
             ||||||||||||||||||||
Sbjct: 58683 tccatcttcaacatgccacc 58664
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>gb|AC166173.3| Mus musculus BAC clone RP23-101K10 from chromosome 3, complete sequence
          Length = 196177

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    tccatcttcaacatgccacc 432
              ||||||||||||||||||||
Sbjct: 187606 tccatcttcaacatgccacc 187587
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>dbj|AB061316.1| Clostridium thermocellum cdp-ym4 gene for cellodextrin phosphorylase,
            complete cds
          Length = 3298

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  gccgtttgtcttcttcaact 332
            ||||||||||||||||||||
Sbjct: 2193 gccgtttgtcttcttcaact 2174
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>dbj|AB006822.1| Clostridium thermocellum DNA for cellodextrin phosphorylase, complete
            cds
          Length = 3286

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  gccgtttgtcttcttcaact 332
            ||||||||||||||||||||
Sbjct: 2184 gccgtttgtcttcttcaact 2165


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,533,306
Number of Sequences: 3902068
Number of extensions: 5533306
Number of successful extensions: 121567
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121023
Number of HSP's gapped (non-prelim): 544
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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