ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast73c12 |
|---|---|
| Clone Library Name | barley_pub |
>WRBA_METAC (P58796) Flavoprotein wrbA| Length = 209 Score = 51.6 bits (122), Expect = 9e-07 Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GGSPYG AG DGSRQPSE ELA+A +QG+++ KK+ Sbjct: 166 GGSPYGVSTIAGGDGSRQPSENELAMARYQGRHVTLIAKKI 206
>WRBA_METMA (Q8PUV4) Flavoprotein wrbA| Length = 209 Score = 51.2 bits (121), Expect = 1e-06 Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GGSPYGA AG DGSRQPSE EL +A +QG+++ KK+ Sbjct: 166 GGSPYGASTIAGGDGSRQPSENELEMARYQGRHVTQIAKKI 206
>WRBA_SHIFL (P0A8G8) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA AG DGSRQPS+ EL++A +QG+Y+A KL Sbjct: 155 GGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_SALTY (Q8ZQ40) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA AG DGSRQPS+ EL++A +QG+Y+A KL Sbjct: 155 GGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_SALTI (Q8Z7N9) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA AG DGSRQPS+ EL++A +QG+Y+A KL Sbjct: 155 GGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_SALPA (Q5PG91) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA AG DGSRQPS+ EL++A +QG+Y+A KL Sbjct: 155 GGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_ECOLI (P0A8G6) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA AG DGSRQPS+ EL++A +QG+Y+A KL Sbjct: 155 GGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_ECOL6 (P0A8G7) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA AG DGSRQPS+ EL++A +QG+Y+A KL Sbjct: 155 GGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKL 195
>WRBA_ECO57 (Q8X4B4) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 197 Score = 50.8 bits (120), Expect = 1e-06 Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA AG DGSRQPS+ EL++A +QG+Y+A KL Sbjct: 155 GGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKL 195
>ALTA7_ALTAL (P42058) Minor allergen Alt a 7 (Alt a VII)| Length = 204 Score = 49.3 bits (116), Expect = 4e-06 Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 1/40 (2%) Frame = -1 Query: 442 GGSPYGAGVF-AGDGSRQPSEAELALAEHQGKYMAAFVKK 326 GGSP+GAG F AGDGSRQPSE EL +A+ QGK V K Sbjct: 162 GGSPWGAGTFSAGDGSRQPSELELNIAQAQGKAFYEAVAK 201
>WRBA_YERPS (Q66BP3) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 199 Score = 47.8 bits (112), Expect = 1e-05 Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA AG DGSRQPS ELA+A QG+++A KL Sbjct: 157 GGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKL 197
>WRBA_YERPE (Q8ZF61) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 199 Score = 47.8 bits (112), Expect = 1e-05 Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA AG DGSRQPS ELA+A QG+++A KL Sbjct: 157 GGTPYGATTIAGGDGSRQPSAEELAIARFQGEHVAKITAKL 197
>WRBA_PHOLL (Q7N5I5) Flavoprotein wrbA (Trp repressor-binding protein)| Length = 199 Score = 47.8 bits (112), Expect = 1e-05 Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFA-GDGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA A GDGSR P+E EL +A +QG+++A KKL Sbjct: 157 GGTPYGASTIADGDGSRIPNENELKIARYQGEHVAKIAKKL 197
>WRBA_RHOPA (Q6NBB9) Flavoprotein wrbA| Length = 199 Score = 46.6 bits (109), Expect = 3e-05 Identities = 25/41 (60%), Positives = 29/41 (70%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAG-VFAGDGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA + GDGSRQPSE ELA A +QGK +A KL Sbjct: 157 GGAPYGATTITGGDGSRQPSETELAGARYQGKTIAETAIKL 197
>WRBA_CAUCR (Q9AA17) Flavoprotein wrbA| Length = 199 Score = 45.4 bits (106), Expect = 6e-05 Identities = 25/41 (60%), Positives = 28/41 (68%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GGSPYGA AG DGSRQPSE EL A +QG+ +A KL Sbjct: 157 GGSPYGATTIAGGDGSRQPSENELTGARYQGRKIAETAIKL 197
>WRBA_AGRT5 (P58795) Flavoprotein wrbA| Length = 199 Score = 45.1 bits (105), Expect = 8e-05 Identities = 23/41 (56%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFA-GDGSRQPSEAELALAEHQGKYMAAFVKKL 323 GGSPYGA GDGSRQPS EL A +QG ++A KL Sbjct: 157 GGSPYGASTITDGDGSRQPSAIELDAARYQGAHVAKLAAKL 197
>WRBA1_RHIME (Q92PU3) Flavoprotein wrbA 1| Length = 199 Score = 45.1 bits (105), Expect = 8e-05 Identities = 23/41 (56%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAG-VFAGDGSRQPSEAELALAEHQGKYMAAFVKKL 323 GGSPYGA + GDGSRQPS EL A QG ++A KL Sbjct: 157 GGSPYGASTITGGDGSRQPSAVELEAARFQGAHVARIAAKL 197
>WRBA_BRAJA (Q89D74) Flavoprotein wrbA| Length = 199 Score = 44.7 bits (104), Expect = 1e-04 Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAG-VFAGDGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA + GDGSRQPS ELA A +QG+ +A +KL Sbjct: 157 GGAPYGATTITGGDGSRQPSANELAGARYQGRQIAETARKL 197
>WRBA_GEOSL (Q74F05) Flavoprotein wrbA| Length = 203 Score = 43.9 bits (102), Expect = 2e-04 Identities = 23/41 (56%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GGSPYGA AG G R PSE +LA A QG+Y+A KL Sbjct: 161 GGSPYGASTIAGGQGERLPSENDLAGARFQGRYVAQIAAKL 201
>WRBA2_RHIME (Q930L2) Flavoprotein wrbA 2| Length = 202 Score = 43.5 bits (101), Expect = 2e-04 Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 1/35 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMA 341 GG+PYGA AG DGSRQPS+ +LA A HQG+ +A Sbjct: 157 GGAPYGATTVAGGDGSRQPSQIDLAGAFHQGEIVA 191
>WRBA_ZYMMO (Q9XBR5) Flavoprotein wrbA| Length = 200 Score = 43.1 bits (100), Expect = 3e-04 Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAG-VFAGDGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYGA + A DGSRQPS+ EL A+ GK++A KKL Sbjct: 157 GGAPYGATTIAASDGSRQPSKNELDGAKFLGKHVAELAKKL 197
>YCP4_YEAST (P25349) Hypothetical 26.4 kDa protein in CDC10-CIT2 intergenic| region Length = 247 Score = 42.7 bits (99), Expect = 4e-04 Identities = 24/41 (58%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 GGSP+GAG AG DGSR S EL +AE QGK KKL Sbjct: 160 GGSPWGAGTLAGPDGSRTASPLELRIAEIQGKTFYETAKKL 200
>PST2_YEAST (Q12335) Protoplast secreted protein 2 precursor| Length = 198 Score = 41.2 bits (95), Expect = 0.001 Identities = 23/40 (57%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKK 326 GGSP+GAG AG DGSR PS EL + E QGK V K Sbjct: 158 GGSPWGAGTIAGSDGSRSPSALELQVHEIQGKTFYETVAK 197
>WRBA_BRUSU (Q8G0P0) Flavoprotein wrbA| Length = 199 Score = 39.3 bits (90), Expect = 0.004 Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFA-GDGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYG A GDGSRQPS EL A QG+ +A KL Sbjct: 157 GGAPYGMTTTADGDGSRQPSAQELDGARFQGRRVAEITAKL 197
>WRBA_BRUME (Q8YH68) Flavoprotein wrbA| Length = 199 Score = 39.3 bits (90), Expect = 0.004 Identities = 22/41 (53%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFA-GDGSRQPSEAELALAEHQGKYMAAFVKKL 323 GG+PYG A GDGSRQPS EL A QG+ +A KL Sbjct: 157 GGAPYGMTTTADGDGSRQPSAQELDGARFQGRRVAEITAKL 197
>CLAH7_CLAHE (P42059) Minor allergen Cla h 7 (Cla h 5) (Cla h V)| Length = 204 Score = 35.0 bits (79), Expect = 0.083 Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 G + +GAG F+G DGSRQPS+ EL L QGK V K+ Sbjct: 162 GAAVWGAGTFSGGDGSRQPSQKELELTA-QGKAFYEAVAKV 201
>P25_SCHPO (P30821) P25 protein (Brefeldin A resistance protein)| Length = 202 Score = 34.7 bits (78), Expect = 0.11 Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGK 350 GGS +GAG +AG DGSR S+ EL +A QG+ Sbjct: 162 GGSSWGAGSYAGADGSRNVSDDELEIARIQGE 193
>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) Length = 559 Score = 32.7 bits (73), Expect = 0.41 Identities = 17/39 (43%), Positives = 21/39 (53%) Frame = -2 Query: 369 SPSTRASTWPPS*RSSVMPDSEPADGPSIEPVSSQSASI 253 +P A PPS S V+P SEP PS PV S + S+ Sbjct: 462 APGPHAPLMPPSPPSQVLPASEPKRHPSTLPVISDARSV 500
>WRBA3_RHIME (Q92Y27) Flavoprotein wrbA 3| Length = 212 Score = 32.3 bits (72), Expect = 0.54 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%) Frame = -1 Query: 442 GGSPYGAGVFAGDGS---RQPSEAELALAEHQGKYMA 341 GGSPYGA A D + R PS EL A QG+++A Sbjct: 157 GGSPYGASTLAEDENHRDRSPSANELDGARFQGRHVA 193
>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1| (WASP-family protein member 1) (WAVE-1 protein) (Verprolin homology domain-containing protein 1) Length = 559 Score = 30.8 bits (68), Expect = 1.6 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -2 Query: 369 SPSTRASTWPPS*RSSVMPDSEPADGPSIEPVSSQSASI 253 +P PPS S V+P SEP PS PV S + S+ Sbjct: 462 APGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSV 500
>YBQ2_YEAST (P38234) Hypothetical 22.9 kDa protein in REG2-YRO2 intergenic| region Length = 210 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -1 Query: 442 GGSPYGAGVFAG-DGSRQPSEAELALAEHQGKYMAAFVKKL 323 G +GAG +G DG R PS +EL + + QGK +K L Sbjct: 170 GSCAWGAGCVSGIDGGRPPSLSELRVHQLQGKAFYDRIKDL 210
>ALGP_PSEAE (P15276) Transcriptional regulatory protein algP (Alginate| regulatory protein algR3) Length = 352 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/48 (25%), Positives = 27/48 (56%) Frame = -2 Query: 399 AGSPARRNLRSPSTRASTWPPS*RSSVMPDSEPADGPSIEPVSSQSAS 256 A PA + P +++ P+ + + P ++PA P+ +PV+++ A+ Sbjct: 263 AAKPAAKPAAKPVAKSAAAKPAAKPAAKPAAKPAAKPAAKPVAAKPAA 310
>PAWR_HUMAN (Q96IZ0) PRKC apoptosis WT1 regulator protein (Prostate apoptosis| response-4 protein) (Par-4) Length = 340 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/46 (34%), Positives = 18/46 (39%) Frame = -2 Query: 414 LLVMVAGSPARRNLRSPSTRASTWPPS*RSSVMPDSEPADGPSIEP 277 +L A P R P+ AS PP R PD P G S P Sbjct: 97 MLTRAAPGPRRSEDEPPAASASAAPPPQRDEEEPDGVPEKGKSSGP 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,866,017 Number of Sequences: 219361 Number of extensions: 1122812 Number of successful extensions: 3315 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3292 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
