ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbast73b05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184185.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1472 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 1319 tggtagtagtagctgtaagggttgtagtaggcggtgtaagggctaatctgaggagaccgg 1260 Query: 409 tggtacatcatctgcggctgc 429 |||||||||||||| |||||| Sbjct: 1259 tggtacatcatctgtggctgc 1239 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 235 ccctcctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctcgacgtcg 294 |||| |||||||| | |||| |||||||| ||||| ||||||||||||||||| || ||| Sbjct: 1415 ccctactacatgacaacacaacccttggtattctcatcgctgaacatggtctccacatcg 1356 Query: 295 cc 296 || Sbjct: 1355 cc 1354
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 1405736 tggtagtagtagctgtaagggttgtagtaggcggtgtaagggctaatctgaggagaccgg 1405677 Query: 409 tggtacatcatctgcggctgc 429 |||||||||||||| |||||| Sbjct: 1405676 tggtacatcatctgtggctgc 1405656 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 235 ccctcctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctcgacgtcg 294 |||| |||||||| | |||| |||||||| ||||| ||||||||||||||||| || ||| Sbjct: 1405832 ccctactacatgacaacacaacccttggtattctcatcgctgaacatggtctccacatcg 1405773 Query: 295 cc 296 || Sbjct: 1405772 cc 1405771 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 attcattcttgatacaggagaaa 120 ||||||||||||||||||||||| Sbjct: 1405967 attcattcttgatacaggagaaa 1405945 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gttctcgtcgctgaacatggtc 285 |||||||||||||||||||||| Sbjct: 17737917 gttctcgtcgctgaacatggtc 17737896 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 317 ggtaggcggaggcgccgccgccgccggg 344 ||||||||| | |||||||||||||||| Sbjct: 6221653 ggtaggcggcgccgccgccgccgccggg 6221680 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 3932143 ggcggaggcgccgccgccgc 3932162
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 103787 tggtagtagtagctgtaagggttgtagtaggcggtgtaagggctaatctgaggagaccgg 103728 Query: 409 tggtacatcatctgcggctgc 429 |||||||||||||| |||||| Sbjct: 103727 tggtacatcatctgtggctgc 103707 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 235 ccctcctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctcgacgtcg 294 |||| |||||||| | |||| |||||||| ||||| ||||||||||||||||| || ||| Sbjct: 103883 ccctactacatgacaacacaacccttggtattctcatcgctgaacatggtctccacatcg 103824 Query: 295 cc 296 || Sbjct: 103823 cc 103822 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 attcattcttgatacaggagaaa 120 ||||||||||||||||||||||| Sbjct: 104018 attcattcttgatacaggagaaa 103996
>dbj|AK105015.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-D10, full insert sequence Length = 1614 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 1298 tggtagtagtagctgtaagggttgtagtaggcggtgtaagggctaatctgaggagaccgg 1239 Query: 409 tggtacatcatctgcggctgc 429 |||||||||||||| |||||| Sbjct: 1238 tggtacatcatctgtggctgc 1218 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 235 ccctcctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctcgacgtcg 294 |||| |||||||| | |||| |||||||| ||||| ||||||||||||||||| || ||| Sbjct: 1394 ccctactacatgacaacacaacccttggtattctcatcgctgaacatggtctccacatcg 1335 Query: 295 cc 296 || Sbjct: 1334 cc 1333 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 attcattcttgatacaggagaaa 120 ||||||||||||||||||||||| Sbjct: 1529 attcattcttgatacaggagaaa 1507
>dbj|AK103550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F09, full insert sequence Length = 1471 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 1318 tggtagtagtagctgtaagggttgtagtaggcggtgtaagggctaatctgaggagaccgg 1259 Query: 409 tggtacatcatctgcggctgc 429 |||||||||||||| |||||| Sbjct: 1258 tggtacatcatctgtggctgc 1238 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 235 ccctcctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctcgacgtcg 294 |||| |||||||| | |||| |||||||| ||||| ||||||||||||||||| || ||| Sbjct: 1414 ccctactacatgacaacacaacccttggtattctcatcgctgaacatggtctccacatcg 1355 Query: 295 cc 296 || Sbjct: 1354 cc 1353
>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0044F08 Length = 141528 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||||| Sbjct: 55357 tggtagtagtagctgtaagggttgtagtaggcggtgtaagggctaatctgaggagaccgg 55298 Query: 409 tggtacatcatctgcggctgc 429 |||||||||||||| |||||| Sbjct: 55297 tggtacatcatctgtggctgc 55277 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 235 ccctcctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctcgacgtcg 294 |||| |||||||| | |||| |||||||| ||||| ||||||||||||||||| || ||| Sbjct: 55453 ccctactacatgacaacacaacccttggtattctcatcgctgaacatggtctccacatcg 55394 Query: 295 cc 296 || Sbjct: 55393 cc 55392 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 98 attcattcttgatacaggagaaa 120 ||||||||||||||||||||||| Sbjct: 55588 attcattcttgatacaggagaaa 55566
>gb|DQ430543.1| Sorghum propinquum locus RZ543 genomic sequence Length = 814 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430542.1| Sorghum bicolor voucher PI585454 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430541.1| Sorghum bicolor voucher PI267539 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430540.1| Sorghum bicolor voucher PI267408 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430539.1| Sorghum bicolor voucher PI221607 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430538.1| Sorghum bicolor voucher PI152702 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430537.1| Sorghum bicolor voucher NSL92371 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430536.1| Sorghum bicolor voucher NSL87902b locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430535.1| Sorghum bicolor voucher NSL87902a locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430534.1| Sorghum bicolor voucher NSL87666 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430533.1| Sorghum bicolor voucher NSL77217 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430532.1| Sorghum bicolor voucher NSL77034 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430531.1| Sorghum bicolor voucher NSL56174 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430530.1| Sorghum bicolor voucher NSL56003 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430529.1| Sorghum bicolor voucher NSL55243 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430528.1| Sorghum bicolor voucher NSL51365 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430527.1| Sorghum bicolor voucher NSL51030 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430526.1| Sorghum bicolor voucher NSL50875 locus RZ543 genomic sequence Length = 805 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|DQ430525.1| Sorghum bicolor voucher BTx623 locus RZ543 genomic sequence Length = 806 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 ||||||||||| |||| |||||||||||| | |||||||||||||||||||| || | Sbjct: 309 tggtagtagtaattgtaagggttgtagtagccagtgtaagggctgatctggggagaggag 250 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 249 tggtacatcatctgcggctgc 229 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | ||||||||||||||||||| || |||||||||||||| Sbjct: 404 cctacatgacaacacagcccttggtgttctcatcactgaacatggtctc 356
>gb|BT019003.1| Zea mays clone Contig491.F mRNA sequence Length = 871 Score = 73.8 bits (37), Expect = 4e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 349 tggtagtagtagctgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccgg 408 |||||||||||| |||| |||||||||| | | ||||||||| ||||||| || || | Sbjct: 479 tggtagtagtagttgtaagggttgtagtggccagtgtaaggggtgatctgcggggaggag 420 Query: 409 tggtacatcatctgcggctgc 429 ||||||||||||||||||||| Sbjct: 419 tggtacatcatctgcggctgc 399 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 239 cctacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||||| | | |||||||||||||||||||| |||||||||||||| Sbjct: 574 cctacatgacaacccagcccttggtgttctcgtcactgaacatggtctc 526
>gb|AY111639.1| Zea mays CL13428_1 mRNA sequence Length = 708 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 241 tacatgatagcacagcccttggtgttctcgtcgctgaacatggtctc 287 ||||||| | |||||||||||||||||||||| |||||||||||||| Sbjct: 374 tacatgacaacacagcccttggtgttctcgtcactgaacatggtctc 420 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 362 tgtacgggttgtagtaggcggtgtaagggctgatctggggtgaccggtggtacatcat 419 |||| |||||||||||| | ||||||||||||||||| || || |||||||||||| Sbjct: 480 tgtaagggttgtagtagccagtgtaagggctgatctgcggggaggagtggtacatcat 537
>ref|XM_468012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1188 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aggcggaggcgccgccgccgccg 342 ||||||||||||||||||||||| Sbjct: 390 aggcggaggcgccgccgccgccg 412
>ref|XM_479246.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccgg 343 ||||||||||||||||||||||| Sbjct: 435 ggcggaggcgccgccgccgccgg 413
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgccgg 343 ||||||||||||||||||||||| Sbjct: 26272629 ggcggaggcgccgccgccgccgg 26272651 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 ggcgccgccgccgccgggctgctg 350 ||||||||||| |||||||||||| Sbjct: 16385022 ggcgccgccgcggccgggctgctg 16384999 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 tcgacgtcgccggtgccggcgccg 309 ||||||||||||| |||||||||| Sbjct: 5529685 tcgacgtcgccggcgccggcgccg 5529662
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 aggcggaggcgccgccgccgccg 342 ||||||||||||||||||||||| Sbjct: 32554998 aggcggaggcgccgccgccgccg 32554976 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gaggcgccgccgccgccggg 344 |||||||||||||||||||| Sbjct: 261641 gaggcgccgccgccgccggg 261660
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgccgg 343 ||||||||||||||||||||||| Sbjct: 47257 ggcggaggcgccgccgccgccgg 47279
>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1353_F08 Length = 101988 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 320 aggcggaggcgccgccgccgccg 342 ||||||||||||||||||||||| Sbjct: 51971 aggcggaggcgccgccgccgccg 51949
>dbj|AK109879.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C09, full insert sequence Length = 1431 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccgg 343 ||||||||||||||||||||||| Sbjct: 435 ggcggaggcgccgccgccgccgg 413
>dbj|AK066823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075K03, full insert sequence Length = 1188 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Plus Query: 320 aggcggaggcgccgccgccgccg 342 ||||||||||||||||||||||| Sbjct: 390 aggcggaggcgccgccgccgccg 412
>ref|XM_475744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 525 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccg 342 |||||||||||||||||||||| Sbjct: 105 ggcggaggcgccgccgccgccg 84
>ref|XM_450636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 751 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 259 ttggtgttctcgtcgctgaacatggt 284 |||| ||||||||||||||||||||| Sbjct: 585 ttggggttctcgtcgctgaacatggt 560
>ref|NM_193727.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 456 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gttctcgtcgctgaacatggtc 285 |||||||||||||||||||||| Sbjct: 432 gttctcgtcgctgaacatggtc 411
>ref|XM_470240.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 873 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgccgggctgctg 350 |||||||||||||||| |||||||||||| Sbjct: 142 ggcggaggcgccgccggggccgggctgctg 171
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccg 342 |||||||||||||||||||||| Sbjct: 21716 ggcggaggcgccgccgccgccg 21695
>gb|AC117184.3| Mus musculus BAC clone RP23-37L10 from chromosome 7, complete sequence Length = 187341 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 62 atcatcatcatcccaggtcaac 83 |||||||||||||||||||||| Sbjct: 158169 atcatcatcatcccaggtcaac 158148
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccg 342 |||||||||||||||||||||| Sbjct: 88008 ggcggaggcgccgccgccgccg 87987
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccgggctgctg 350 |||||||||||||||| |||||||||||| Sbjct: 2759267 ggcggaggcgccgccggggccgggctgctg 2759238 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 284 tctcgacgtcgccggtgccggcgccgcc 311 ||||| ||||||||| |||||||||||| Sbjct: 33967663 tctcggcgtcgccggcgccggcgccgcc 33967690 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 32603289 cggaggcgccgccgccgccg 32603270 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cgtcgccggtgccggcgccgccgg 313 ||||||||| |||||||||||||| Sbjct: 31803190 cgtcgccggcgccggcgccgccgg 31803167 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggaggcgccgccgccgccgg 343 |||||||||||||||||||| Sbjct: 5554448 ggaggcgccgccgccgccgg 5554467
>emb|AJ720856.1| Gallus gallus mRNA for hypothetical protein, clone 27p9 Length = 3403 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgccg 342 |||||||||||||||||||||| Sbjct: 78 ggcggaggcgccgccgccgccg 99
>ref|NM_001006537.1| Gallus gallus importin 13 (IPO13), mRNA Length = 3403 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgccg 342 |||||||||||||||||||||| Sbjct: 78 ggcggaggcgccgccgccgccg 99
>dbj|AK220225.1| Mus musculus mRNA for mKIAA2037 protein Length = 4451 Score = 44.1 bits (22), Expect = 0.37 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg-ggctgctgg 351 |||||||||||||||||||| ||||||||| Sbjct: 55 cggaggcgccgccgccgccgcggctgctgg 84
>emb|AJ132478.3|CRE132478 Chlamydomonas reinhardtii cDhc1b gene for cytoplasmic dynein heavy chain 1b Length = 22023 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 330 gccgccgccgccgggctgctgg 351 |||||||||||||||||||||| Sbjct: 20819 gccgccgccgccgggctgctgg 20798
>dbj|AK134320.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030414I06 product:Weakly similar to TESMIN, full insert sequence Length = 2749 Score = 44.1 bits (22), Expect = 0.37 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg-ggctgctgg 351 |||||||||||||||||||| ||||||||| Sbjct: 58 cggaggcgccgccgccgccgcggctgctgg 87
>ref|NM_172714.1| Mus musculus expressed sequence AI461788 (AI461788), mRNA Length = 3743 Score = 44.1 bits (22), Expect = 0.37 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg-ggctgctgg 351 |||||||||||||||||||| ||||||||| Sbjct: 69 cggaggcgccgccgccgccgcggctgctgg 98
>gb|AF282897.1|AF282897 Burkholderia cepacia JS150 tbc1 gene cluster, complete sequence Length = 5220 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 293 cgccggtgccggcgccgccggg 314 |||||||||||||||||||||| Sbjct: 4601 cgccggtgccggcgccgccggg 4580
>dbj|AK029288.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4832414L08 product:weakly similar to TESMIN (METALLOTHIONEIN-LIKE 5, TESTIS-SPECIFIC) (TESTIS-SPECIFIC METALLOTHIONEIN-LIKE PROTEIN) [Homo sapiens], full insert sequence Length = 3743 Score = 44.1 bits (22), Expect = 0.37 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg-ggctgctgg 351 |||||||||||||||||||| ||||||||| Sbjct: 69 cggaggcgccgccgccgccgcggctgctgg 98
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 259 ttggtgttctcgtcgctgaacatggt 284 |||| ||||||||||||||||||||| Sbjct: 11923861 ttggggttctcgtcgctgaacatggt 11923836 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgct 349 ||||||||||||||||||||| Sbjct: 16498391 cgccgccgccgccgggctgct 16498371
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccg 342 |||||||||||||||||||||| Sbjct: 26170668 ggcggaggcgccgccgccgccg 26170647 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 9244855 cgccgccgccgccgggctgc 9244836 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 2773058 ggcggaggcgccgccgccgc 2773077 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 598575 cggaggcgccgccgccgccg 598556
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccgggctgctg 350 |||||||||||||||| |||||||||||| Sbjct: 2759377 ggcggaggcgccgccggggccgggctgctg 2759348 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 284 tctcgacgtcgccggtgccggcgccgcc 311 ||||| ||||||||| |||||||||||| Sbjct: 34058135 tctcggcgtcgccggcgccggcgccgcc 34058162 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 32693799 cggaggcgccgccgccgccg 32693780 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cgtcgccggtgccggcgccgccgg 313 ||||||||| |||||||||||||| Sbjct: 31893706 cgtcgccggcgccggcgccgccgg 31893683 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggaggcgccgccgccgccgg 343 |||||||||||||||||||| Sbjct: 5553663 ggaggcgccgccgccgccgg 5553682
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccgggctgctg 350 |||||||||||||||| |||||||||||| Sbjct: 31223 ggcggaggcgccgccggggccgggctgctg 31194
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccgggctgctg 350 |||||||||||||||| |||||||||||| Sbjct: 104186 ggcggaggcgccgccggggccgggctgctg 104157
>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0094H06 Length = 147245 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gttctcgtcgctgaacatggtc 285 |||||||||||||||||||||| Sbjct: 119452 gttctcgtcgctgaacatggtc 119431
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 259 ttggtgttctcgtcgctgaacatggt 284 |||| ||||||||||||||||||||| Sbjct: 105351 ttggggttctcgtcgctgaacatggt 105326
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 259 ttggtgttctcgtcgctgaacatggt 284 |||| ||||||||||||||||||||| Sbjct: 28341 ttggggttctcgtcgctgaacatggt 28316
>dbj|AK109394.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E06, full insert sequence Length = 1144 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgccgggctgctg 350 |||||||||||||||| |||||||||||| Sbjct: 180 ggcggaggcgccgccggggccgggctgctg 209
>dbj|AK068537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152L24, full insert sequence Length = 751 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 259 ttggtgttctcgtcgctgaacatggt 284 |||| ||||||||||||||||||||| Sbjct: 585 ttggggttctcgtcgctgaacatggt 560
>dbj|AK060145.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A06, full insert sequence Length = 1027 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gttctcgtcgctgaacatggtc 285 |||||||||||||||||||||| Sbjct: 581 gttctcgtcgctgaacatggtc 560
>gb|AC105906.21| Mus musculus chromosome 7, clone RP24-81O24, complete sequence Length = 213004 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 atcatcatcatcccaggtcaac 83 |||||||||||||||||||||| Sbjct: 194602 atcatcatcatcccaggtcaac 194623
>ref|XM_588722.2| PREDICTED: Bos taurus similar to Fanconi anemia, complementation group F (LOC539681), mRNA Length = 1943 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgct 349 ||||||||||||||||||||| Sbjct: 208 cgccgccgccgccgggctgct 188
>gb|AC114645.9| Mus musculus chromosome 9, clone RP24-131G14, complete sequence Length = 214734 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgcc 341 ||||||||||||||||||||| Sbjct: 181127 ggcggaggcgccgccgccgcc 181107
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccgg 343 ||||||||||||||||||||| Sbjct: 460979 cggaggcgccgccgccgccgg 460999
>emb|Z84485.1|HS524E15 Human DNA sequence from clone RP3-524E15 on chromosome 6p21 Contains the BRPF3 gene for bromodomain and PHD finger containing protein 3 and a CpG Island, complete sequence Length = 80908 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgccg 342 ||||||||||||||||||||| Sbjct: 49914 gcggaggcgccgccgccgccg 49934
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 ggcgccgccgccgccgggctg 347 ||||||||||||||||||||| Sbjct: 2973135 ggcgccgccgccgccgggctg 2973115
>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17, complete sequence Length = 133279 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 aggcggaggcgccgccgccgc 340 ||||||||||||||||||||| Sbjct: 24595 aggcggaggcgccgccgccgc 24615
>gb|AC151616.2| Emiliania huxleyi clone JGIACCU-13M1, complete sequence Length = 36906 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 gtcgccggtgccggcgccgccgggg 315 ||||||||||||||||||| ||||| Sbjct: 12411 gtcgccggtgccggcgccggcgggg 12387
>gb|DQ023266.1| Pan troglodytes HSD17B1P pseudogene, complete sequence; and 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 200028 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 gaggcgccgccgccgccgggc 345 ||||||||||||||||||||| Sbjct: 25086 gaggcgccgccgccgccgggc 25106
>gb|DQ023265.1| Hylobates klossii HSD17B1P pseudogene, complete sequence; and 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 46648 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 gaggcgccgccgccgccgggc 345 ||||||||||||||||||||| Sbjct: 1964 gaggcgccgccgccgccgggc 1984
>dbj|AK155050.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630118J21 product:programmed cell death protein 7, full insert sequence Length = 2414 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgcc 341 ||||||||||||||||||||| Sbjct: 405 ggcggaggcgccgccgccgcc 425
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 aggcggaggcgccgccgccgc 340 ||||||||||||||||||||| Sbjct: 31202994 aggcggaggcgccgccgccgc 31203014 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 30142550 cggaggcgccgccgccgccg 30142569 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 30081847 cggaggcgccgccgccgccg 30081866 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cgtcgccggtgccggcgccg 309 |||||||||||||||||||| Sbjct: 28388442 cgtcgccggtgccggcgccg 28388423
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 cgccggtgccggcgccgccgg 313 ||||||||||||||||||||| Sbjct: 27211538 cgccggtgccggcgccgccgg 27211518
>gb|AC067852.23| Homo sapiens chromosome 17, clone RP11-400F19, complete sequence Length = 179146 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 gaggcgccgccgccgccgggc 345 ||||||||||||||||||||| Sbjct: 145903 gaggcgccgccgccgccgggc 145883
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 gcgccgccgccgccgggctgc 348 ||||||||||||||||||||| Sbjct: 4496578 gcgccgccgccgccgggctgc 4496598 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 cgccgccgccgggctgctgg 351 |||||||||||||||||||| Sbjct: 1917086 cgccgccgccgggctgctgg 1917105
>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0637D03 Length = 180159 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 cgccggtgccggcgccgccgg 313 ||||||||||||||||||||| Sbjct: 68554 cgccggtgccggcgccgccgg 68534
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgct 349 ||||||||||||||||||||| Sbjct: 30616 cgccgccgccgccgggctgct 30596
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgct 349 ||||||||||||||||||||| Sbjct: 186938 cgccgccgccgccgggctgct 186918
>dbj|AK108002.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-G07, full insert sequence Length = 793 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 293 cgccggtgccggcgccgccgg 313 ||||||||||||||||||||| Sbjct: 567 cgccggtgccggcgccgccgg 547
>dbj|AK100259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062G17, full insert sequence Length = 1906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 aggcggaggcgccgccgccgc 340 ||||||||||||||||||||| Sbjct: 63 aggcggaggcgccgccgccgc 83
>dbj|AK059606.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-E12, full insert sequence Length = 502 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgct 349 ||||||||||||||||||||| Sbjct: 263 cgccgccgccgccgggctgct 243
>gb|AF083929.1|AF083929 Mus musculus ES18 mRNA, complete cds Length = 2448 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgcc 341 ||||||||||||||||||||| Sbjct: 440 ggcggaggcgccgccgccgcc 460
>gb|U34879.1|HSU34879 Human 17-beta-hydroxysteroid dehydrogenase (EDH17B2) gene, complete cds Length = 46610 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 gaggcgccgccgccgccgggc 345 ||||||||||||||||||||| Sbjct: 6823 gaggcgccgccgccgccgggc 6843
>emb|AJ629123.1| Streptomyces sp. DSM 40477 genomic region of the apramycin biosynthesis cluster Length = 41623 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 ggtgccggcgccgccggggtg 317 ||||||||||||||||||||| Sbjct: 1838 ggtgccggcgccgccggggtg 1858
>ref|NM_016688.1| Mus musculus programmed cell death protein 7 (Pdcd7), mRNA Length = 2448 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgcc 341 ||||||||||||||||||||| Sbjct: 440 ggcggaggcgccgccgccgcc 460
>dbj|AB070951.1| Streptomyces avermitilis peptide-2 biosynthetic gene cluster Length = 32748 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 gcgccgccgccgccgggctgc 348 ||||||||||||||||||||| Sbjct: 24282 gcgccgccgccgccgggctgc 24262
>gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome Length = 1469720 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 aaggcagtcaaatgcaatta 39 |||||||||||||||||||| Sbjct: 674647 aaggcagtcaaatgcaatta 674628
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gcgccgccgccgccgggctg 347 |||||||||||||||||||| Sbjct: 3208675 gcgccgccgccgccgggctg 3208694 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgctggt 352 ||||||||||||||||| |||||| Sbjct: 1740685 cgccgccgccgccgggcagctggt 1740662
>gb|AC153380.1| Mus musculus BAC RP23-256G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160046 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 ttactaattacacactgcagtttt 60 |||||||||||||| ||||||||| Sbjct: 154668 ttactaattacacaatgcagtttt 154691
>ref|XM_550311.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 715 ggcggaggcgccgccgccgc 734
>ref|NM_188429.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1896 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 ggtaggcggaggcgccgccgccgccggg 344 ||||||||| | |||||||||||||||| Sbjct: 1396 ggtaggcggcgccgccgccgccgccggg 1369
>ref|XM_514484.1| PREDICTED: Pan troglodytes attractin (LOC458060), mRNA Length = 4689 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 ggtcaacaacacccatgatccatt 100 ||||||||||||||||||| |||| Sbjct: 1548 ggtcaacaacacccatgattcatt 1525
>ref|XM_481314.1| Oryza sativa (japonica cultivar-group), mRNA Length = 258 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cgccggtgccggcgccgccg 312 |||||||||||||||||||| Sbjct: 121 cgccggtgccggcgccgccg 102
>ref|XM_482065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1035 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 256 cgccgccgccgccgggctgc 237
>ref|XM_480892.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1083 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 cgacgtcgccggtgccggcgccgc 310 |||||||||||| ||||||||||| Sbjct: 66 cgacgtcgccggcgccggcgccgc 43
>ref|XM_470106.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1283 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 284 tctcgacgtcgccggtgccggcgccgcc 311 ||||| ||||||||| |||||||||||| Sbjct: 176 tctcggcgtcgccggcgccggcgccgcc 203
>ref|XM_469940.1| Oryza sativa (japonica cultivar-group), mRNA Length = 519 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 407 cggaggcgccgccgccgccg 426
>ref|NM_194086.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cgtcgccggtgccggcgccgccgg 313 ||||||||| |||||||||||||| Sbjct: 108 cgtcgccggcgccggcgccgccgg 85
>ref|NM_194838.1| Oryza sativa (japonica cultivar-group) putative thaumatin-like protein (OSJNBa0030B02.12), mRNA Length = 1170 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 cggtgccggcgccgccggggtggt 319 |||||||||||||| ||||||||| Sbjct: 203 cggtgccggcgccggcggggtggt 226
>ref|XM_463810.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1644 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gaggcgccgccgccgccggg 344 |||||||||||||||||||| Sbjct: 237 gaggcgccgccgccgccggg 256
>ref|XM_462675.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 246 cggaggcgccgccgccgccg 227
>ref|NM_197439.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0005J14.28), mRNA Length = 591 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 91 cgccgccgccgccgggctgc 72
>ref|NM_197274.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0015K05.5), mRNA Length = 942 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccggg 344 ||||||| |||||||||||||||| Sbjct: 569 ggcggagccgccgccgccgccggg 546
>ref|NM_187219.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1524 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 ggcgccgccgccgccgggctgctg 350 ||||||||||| |||||||||||| Sbjct: 140 ggcgccgccgcggccgggctgctg 117
>ref|XM_477034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1500 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 tcgacgtcgccggtgccggcgccg 309 ||||||||||||| |||||||||| Sbjct: 44 tcgacgtcgccggcgccggcgccg 21
>ref|XM_473730.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 246 cggaggcgccgccgccgccg 227
>gb|BT019155.1| Zea mays clone Contig818.F mRNA sequence Length = 1093 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 ttggtgttctcgtcgctgaacatg 282 |||| ||||||||||||||||||| Sbjct: 614 ttggggttctcgtcgctgaacatg 591
>gb|BT018822.1| Zea mays clone EL01N0532D03.d mRNA sequence Length = 1417 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 300 cgccgccgccgccgggctgc 281
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 16800 cgccgccgccgccgggctgc 16781
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 51384 ggcggaggcgccgccgccgc 51403
>gb|AY713945.1| Gasterosteus aculeatus MHC class II antigen gene cluster, complete sequence Length = 99318 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 89927 cggaggcgccgccgccgccg 89908
>gb|AC154144.9| Mus musculus chromosome 1, clone RP24-289K8, complete sequence Length = 158556 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 caggagaaaaacattacatt 131 |||||||||||||||||||| Sbjct: 10860 caggagaaaaacattacatt 10879
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 115974 cggaggcgccgccgccgccg 115955
>gb|AC138359.8| Mus musculus chromosome 1, clone RP24-383H12, complete sequence Length = 217891 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 caggagaaaaacattacatt 131 |||||||||||||||||||| Sbjct: 198109 caggagaaaaacattacatt 198128
>gb|AC121362.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009N21, complete sequence Length = 164925 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 121510 cgccgccgccgccgggctgc 121491
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 194950 ggcggaggcgccgccgccgc 194931
>ref|XM_426433.1| PREDICTED: Gallus gallus similar to Butyrate response factor 1 (TIS11B protein) (EGF-inducible protein CMG1) (LOC428877), mRNA Length = 1326 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 gcgccgccgccgccgggctgctgg 351 ||||||||||| |||||||||||| Sbjct: 941 gcgccgccgcccccgggctgctgg 964
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 140618 cggaggcgccgccgccgccg 140637
>gb|AY659174.1| Synthetic construct Peudomonas aeruginosa clone FLH036934.01F PA0536 gene, partial cds Length = 1026 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 1015 cggaggcgccgccgccgccg 996
>ref|NM_199079.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (Ddx17), transcript variant 2, mRNA Length = 2860 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 212 gcggaggcgccgccgccgcc 231
>ref|NM_199080.2| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (Ddx17), transcript variant 1, mRNA Length = 4772 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 393 gcggaggcgccgccgccgcc 412
>ref|NM_001040187.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (Ddx17), transcript variant 4, mRNA Length = 4766 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 393 gcggaggcgccgccgccgcc 412
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 34305 ggcggaggcgccgccgccgc 34286
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cgtcgccggtgccggcgccg 309 |||||||||||||||||||| Sbjct: 68271 cgtcgccggtgccggcgccg 68290
>gb|AC121847.2| Mus musculus BAC clone RP24-86M13 from 3, complete sequence Length = 190165 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 131559 cggaggcgccgccgccgccg 131578
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ggtgccggcgccgccggggt 316 |||||||||||||||||||| Sbjct: 66147 ggtgccggcgccgccggggt 66128
>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence Length = 195549 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 tcatcatcatcccaggtcaacaac 86 |||||||| ||||||||||||||| Sbjct: 126886 tcatcatcttcccaggtcaacaac 126909
>emb|AL121835.18|HSJ570O12 Human DNA sequence from clone RP4-570O12 on chromosome 6q15-16.2 Contains the 5' end of the CNR1 gene for cannabinoid receptor 1 (brain), a ribsomal protein S14 (RPS14) pseudogene and a CpG island, complete sequence Length = 116691 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 324 ggaggcgccgccgccgccgggctgctgg 351 ||||||| ||||| |||||||||||||| Sbjct: 9345 ggaggcggcgccggcgccgggctgctgg 9372
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cgtcgccggtgccggcgccgccgg 313 ||||||||| |||||||||||||| Sbjct: 128416 cgtcgccggcgccggcgccgccgg 128393
>gb|BC037581.1| Homo sapiens, clone IMAGE:5244076, mRNA Length = 1659 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 324 ggaggcgccgccgccgccgggctgctgg 351 ||||||| ||||| |||||||||||||| Sbjct: 926 ggaggcggcgccggcgccgggctgctgg 899
>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16 Length = 349981 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cgccggtgccggcgccgccg 312 |||||||||||||||||||| Sbjct: 177401 cgccggtgccggcgccgccg 177382
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgctggt 352 |||||||| ||||||||||||||| Sbjct: 219652 cgccgccgacgccgggctgctggt 219629
>emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006A01, complete sequence Length = 143157 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 121526 cggaggcgccgccgccgccg 121545
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cgtcgccggtgccggcgccg 309 |||||||||||||||||||| Sbjct: 37117 cgtcgccggtgccggcgccg 37098
>emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20N10 Length = 90273 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 aaatgcaattactaattaca 48 |||||||||||||||||||| Sbjct: 36049 aaatgcaattactaattaca 36068
>gb|AC117806.11| Mus musculus chromosome 15, clone RP24-566D14, complete sequence Length = 194925 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 78401 gcggaggcgccgccgccgcc 78382
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggaggcgccgccgccgccgg 343 |||||||||||||||||||| Sbjct: 97980 ggaggcgccgccgccgccgg 97999
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cggtgccggcgccgccgggg 315 |||||||||||||||||||| Sbjct: 2714457 cggtgccggcgccgccgggg 2714476
>gb|AC090870.13| Oryza sativa chromosome 10 BAC OSJNBb0015K05 genomic sequence, complete sequence Length = 123292 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccggg 344 ||||||| |||||||||||||||| Sbjct: 39696 ggcggagccgccgccgccgccggg 39673
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccggg 344 ||||||| |||||||||||||||| Sbjct: 123343 ggcggagccgccgccgccgccggg 123320
>gb|AC156389.5| Mus musculus 10 BAC RP24-308P8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 158029 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 ttactaattacacactgcagtttt 60 |||||||||||||| ||||||||| Sbjct: 60942 ttactaattacacaatgcagtttt 60919
>emb|AJ635325.1| Spermatozopsis similis mRNA for putative eyespot globule-associated protein 1 (gap1 gene), strain SAG B 1.85 Length = 2358 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccggg 344 ||||| |||||||||||||||||| Sbjct: 1460 ggcggcggcgccgccgccgccggg 1437
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 75581 ggcggaggcgccgccgccgc 75600
>gb|AE005978.1| Caulobacter crescentus CB15 section 304 of 359 of the complete genome Length = 11417 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgccggg 344 ||||| |||||||||||||||||| Sbjct: 8455 ggcggcggcgccgccgccgccggg 8432
>gb|U24241.2|SCU24241 Sorangium cellulosum acyl-CoA dehydrogenase (sorE), beta-hydroxybutyryl-CoA dehydrogenase (sorD), putative methoxymalonyl-CoA synthase (sorC), reductase (sorR), soraphen polyketide synthase A (sorA), soraphen polyketide synthase B (sorB), O-methyltransferase (sorM), beta-mannanase, and xylanse-arabinofuranosidase bifunctional enzyme genes, complete cds; and unknown genes Length = 67523 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 44134 cgccgccgccgccgggctgc 44153
>dbj|AK151061.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022F15 product:Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17) homolog [Homo sapiens], full insert sequence Length = 2869 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 168 gcggaggcgccgccgccgcc 187
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence Length = 146836 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 cggtgccggcgccgccggggtggt 319 |||||||||||||| ||||||||| Sbjct: 101971 cggtgccggcgccggcggggtggt 101948
>dbj|AK152831.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830087A19 product:Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17) homolog [Homo sapiens], full insert sequence Length = 2869 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 168 gcggaggcgccgccgccgcc 187
>dbj|AK152749.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830083L17 product:Probable RNA-dependent helicase p72 (DEAD-box protein p72) (DEAD-box protein 17) homolog [Homo sapiens], full insert sequence Length = 2872 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 168 gcggaggcgccgccgccgcc 187
>dbj|AK161012.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022448N16 product:Similar to P68 RNA helicase homolog [Mus musculus], full insert sequence Length = 3246 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 208 gcggaggcgccgccgccgcc 227
>dbj|AK161001.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022439H17 product:DEAD box polypeptide 17, isoform 2, full insert sequence Length = 2821 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 209 gcggaggcgccgccgccgcc 228
>gb|AC021105.13| Homo sapiens BAC clone RP11-163O17 from 4, complete sequence Length = 187360 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 37095 cggaggcgccgccgccgccg 37114
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 cgccgccgccgggctgctgg 351 |||||||||||||||||||| Sbjct: 1057665 cgccgccgccgggctgctgg 1057646
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 94514 ggcggaggcgccgccgccgc 94495
>dbj|AK039888.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430025E01 product:similar to P68 RNA HELICASE (FRAGMENT) [Mus musculus], full insert sequence Length = 1997 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 212 gcggaggcgccgccgccgcc 231
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 cgccgccgccgccgggctgctggt 352 |||||||||||||| ||||||||| Sbjct: 1165499 cgccgccgccgccgtgctgctggt 1165522 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cgccggtgccggcgccgccg 312 |||||||||||||||||||| Sbjct: 860394 cgccggtgccggcgccgccg 860375
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggtgccggcgccgccggggt 316 |||||||||||||||||||| Sbjct: 22275151 ggtgccggcgccgccggggt 22275170 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cgtcgccggtgccggcgccg 309 |||||||||||||||||||| Sbjct: 21716218 cgtcgccggtgccggcgccg 21716237 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 18931107 ggcggaggcgccgccgccgc 18931088
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 19888737 cgccgccgccgccgggctgc 19888756 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgccggg 344 ||||||| |||||||||||||||| Sbjct: 18955345 ggcggagccgccgccgccgccggg 18955368 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 cggtgccggcgccgccggggtggt 319 |||||||||||||| ||||||||| Sbjct: 2775195 cggtgccggcgccggcggggtggt 2775172
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 17533257 cgccgccgccgccgggctgc 17533276 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cgccggtgccggcgccgccg 312 |||||||||||||||||||| Sbjct: 11500194 cgccggtgccggcgccgccg 11500175 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 cgacgtcgccggtgccggcgccgc 310 |||||||||||| ||||||||||| Sbjct: 8458635 cgacgtcgccggcgccggcgccgc 8458612
>gb|BC096036.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, transcript variant 1, mRNA (cDNA clone MGC:106444 IMAGE:30549388), complete cds Length = 4741 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 393 gcggaggcgccgccgccgcc 412
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 284 tctcgacgtcgccggtgccggcgccgcc 311 ||||| ||||||||| |||||||||||| Sbjct: 90028 tctcggcgtcgccggcgccggcgccgcc 90001
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 97306 cgccgccgccgccgggctgc 97287
>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013F10 Length = 163095 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 54047 ggcggaggcgccgccgccgc 54066
>gb|AE004490.1| Pseudomonas aeruginosa PAO1, section 51 of 529 of the complete genome Length = 11445 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 4428 cggaggcgccgccgccgccg 4447
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gaggcgccgccgccgccggg 344 |||||||||||||||||||| Sbjct: 1764138 gaggcgccgccgccgccggg 1764157 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 ggcgccgccgccgccgggctgctg 350 ||||||||||| |||||||||||| Sbjct: 1286448 ggcgccgccgcggccgggctgctg 1286471
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggaggcgccgccgccgccgg 343 |||||||||||||||||||| Sbjct: 18147 ggaggcgccgccgccgccgg 18166
>dbj|AP005448.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0404G11 Length = 167623 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 ggcgccgccgccgccgggctgctg 350 ||||||||||| |||||||||||| Sbjct: 25813 ggcgccgccgcggccgggctgctg 25790
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cgccggtgccggcgccgccg 312 |||||||||||||||||||| Sbjct: 54328 cgccggtgccggcgccgccg 54309
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 cgacgtcgccggtgccggcgccgc 310 |||||||||||| ||||||||||| Sbjct: 74352 cgacgtcgccggcgccggcgccgc 74329
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 317 ggtaggcggaggcgccgccgccgccggg 344 ||||||||| | |||||||||||||||| Sbjct: 83851 ggtaggcggcgccgccgccgccgccggg 83878
>gb|AC007956.5|AC007956 Homo sapiens chromosome 14 clones CTD-3211F8 and RP11-173A8 containing KIAA0317 gene, complete cds; and unknown gene, complete sequence Length = 233738 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 caaaatactagtaaaaaggt 158 |||||||||||||||||||| Sbjct: 227048 caaaatactagtaaaaaggt 227029
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gccgccgccgggctgctggt 352 |||||||||||||||||||| Sbjct: 5581639 gccgccgccgggctgctggt 5581620
>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0473C09 Length = 141066 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 ggcgccgccgccgccgggctgctg 350 ||||||||||| |||||||||||| Sbjct: 91078 ggcgccgccgcggccgggctgctg 91055
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 tcgacgtcgccggtgccggcgccg 309 ||||||||||||| |||||||||| Sbjct: 42770 tcgacgtcgccggcgccggcgccg 42747
>dbj|AB110643.1| Streptomyces thermoviolaceus stxIV, stxI genes for alpha-L-arabinofuranosidase, xylanase I complete cds Length = 3642 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 285 ctcgacgtcgccggtgccggcgccgccg 312 ||||||||| ||||||||||| |||||| Sbjct: 3297 ctcgacgtctccggtgccggcaccgccg 3324
>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C06 Length = 110989 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gaggcgccgccgccgccggg 344 |||||||||||||||||||| Sbjct: 71616 gaggcgccgccgccgccggg 71635
>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, clone:OJA1212_C06 Length = 113554 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gaggcgccgccgccgccggg 344 |||||||||||||||||||| Sbjct: 74181 gaggcgccgccgccgccggg 74200
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 9907 cgccgccgccgccgggctgc 9926
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 cgccggtgccggcgccgccg 312 |||||||||||||||||||| Sbjct: 114183 cgccggtgccggcgccgccg 114164
>dbj|AK121940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D18, full insert sequence Length = 1515 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 284 tctcgacgtcgccggtgccggcgccgcc 311 ||||| ||||||||| |||||||||||| Sbjct: 189 tctcggcgtcgccggcgccggcgccgcc 216
>dbj|AK121243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B06, full insert sequence Length = 2310 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggtgccggcgccgccggggt 316 |||||||||||||||||||| Sbjct: 567 ggtgccggcgccgccggggt 586
>dbj|AK120723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002I18, full insert sequence Length = 3247 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cgtcgccggtgccggcgccg 309 |||||||||||||||||||| Sbjct: 2420 cgtcgccggtgccggcgccg 2401
>dbj|AK109913.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-A03, full insert sequence Length = 1306 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 cggtgccggcgccgccggggtggt 319 |||||||||||||| ||||||||| Sbjct: 148 cggtgccggcgccggcggggtggt 171
>dbj|AK109683.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-D07, full insert sequence Length = 1872 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cgtcgccggtgccggcgccgccgg 313 ||||||||| |||||||||||||| Sbjct: 52 cgtcgccggcgccggcgccgccgg 29
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 cggtgccggcgccgccgggg 315 |||||||||||||||||||| Sbjct: 2155759 cggtgccggcgccgccgggg 2155778
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 285 ctcgacgtcgccggtgccggcgccgccg 312 ||||||| |||||| ||||||||||||| Sbjct: 1047786 ctcgacggcgccggcgccggcgccgccg 1047813
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 708142 cggaggcgccgccgccgccg 708161
>gb|BC062910.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, transcript variant 2, mRNA (cDNA clone MGC:79147 IMAGE:6816663), complete cds Length = 2846 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcggaggcgccgccgccgcc 341 |||||||||||||||||||| Sbjct: 198 gcggaggcgccgccgccgcc 217
>gb|AF194024.1|AF194024 Streptomyces thermocyaneoviolaceus xylanase A precursor (xynA) gene, complete cds Length = 1918 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 285 ctcgacgtcgccggtgccggcgccgccg 312 ||||||||| ||||||||||| |||||| Sbjct: 1573 ctcgacgtctccggtgccggcaccgccg 1600
>dbj|AK064684.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-B01, full insert sequence Length = 1046 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 737 ggcggaggcgccgccgccgc 756
>emb|BX530723.8| Zebrafish DNA sequence from clone DKEYP-119B4 in linkage group 20, complete sequence Length = 119735 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 atcaccactagctcattcct 197 |||||||||||||||||||| Sbjct: 80351 atcaccactagctcattcct 80332
>dbj|AK058618.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B05, full insert sequence Length = 947 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggaggcgccgccgccgccgg 343 |||||||||||||||||||| Sbjct: 166 ggaggcgccgccgccgccgg 185
>gb|AY109329.1| Zea mays CL1979_1 mRNA sequence Length = 2642 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 ttggtgttctcgtcgctgaacatg 282 |||| ||||||||||||||||||| Sbjct: 2141 ttggggttctcgtcgctgaacatg 2118
>gb|AY108632.1| Zea mays PCO084337 mRNA sequence Length = 798 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gttctcgtcgctgaacatgg 283 |||||||||||||||||||| Sbjct: 625 gttctcgtcgctgaacatgg 606
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 cgccgccgccgccgggctgctggt 352 ||||||||||||| |||||||||| Sbjct: 1561888 cgccgccgccgcctggctgctggt 1561911
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 cgccgccgccgggctgctgg 351 |||||||||||||||||||| Sbjct: 1234257 cgccgccgccgggctgctgg 1234238
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 cgccgccgccgccgggctgc 348 |||||||||||||||||||| Sbjct: 19900013 cgccgccgccgccgggctgc 19900032 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 ggcggaggcgccgccgccgccggg 344 ||||||| |||||||||||||||| Sbjct: 18966575 ggcggagccgccgccgccgccggg 18966598 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 cggtgccggcgccgccggggtggt 319 |||||||||||||| ||||||||| Sbjct: 2775146 cggtgccggcgccggcggggtggt 2775123
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ggtgccggcgccgccggggt 316 |||||||||||||||||||| Sbjct: 22585062 ggtgccggcgccgccggggt 22585081 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cgtcgccggtgccggcgccg 309 |||||||||||||||||||| Sbjct: 22026417 cgtcgccggtgccggcgccg 22026436 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ggcggaggcgccgccgccgc 340 |||||||||||||||||||| Sbjct: 19089756 ggcggaggcgccgccgccgc 19089737
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 38958 cggaggcgccgccgccgccg 38977
>gb|AC139316.4| Mus musculus BAC clone RP24-500I24 from 3, complete sequence Length = 187000 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cggaggcgccgccgccgccg 342 |||||||||||||||||||| Sbjct: 128705 cggaggcgccgccgccgccg 128686
>gb|AC102628.5| Mus musculus chromosome 7, clone RP23-467K15, complete sequence Length = 178563 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 tcatcatcatcccaggtcaacaac 86 |||||||| ||||||||||||||| Sbjct: 135995 tcatcatcttcccaggtcaacaac 136018
>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete sequence Length = 150663 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cgtcgccggtgccggcgccgccgg 313 ||||||||| |||||||||||||| Sbjct: 4443 cgtcgccggcgccggcgccgccgg 4420
>emb|AL671335.12| Mouse DNA sequence from clone RP23-130J1 on chromosome X, complete sequence Length = 175336 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 ctgcagttttgatcatcatcatcc 74 ||||||||||||||||||| |||| Sbjct: 21456 ctgcagttttgatcatcatgatcc 21479
>dbj|AB064626.1| TT virus genes for ORF2 and ORF1, complete and partial cds, clone:JT41-09 Length = 522 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gtaggcggaggcgccgccgc 337 |||||||||||||||||||| Sbjct: 445 gtaggcggaggcgccgccgc 464
>dbj|AB064620.1| TT virus genes for ORF2 and ORF1, complete and partial cds, clone:JT07-13 Length = 522 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gtaggcggaggcgccgccgc 337 |||||||||||||||||||| Sbjct: 445 gtaggcggaggcgccgccgc 464
>dbj|AB064619.1| TT virus genes for ORF2 and ORF1, complete and partial cds, clone:JT05-14 Length = 568 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gtaggcggaggcgccgccgc 337 |||||||||||||||||||| Sbjct: 445 gtaggcggaggcgccgccgc 464
>dbj|AB064616.1| TT virus genes for ORF2 and ORF1, complete and partial cds, clone:JT01-01 Length = 522 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gtaggcggaggcgccgccgc 337 |||||||||||||||||||| Sbjct: 445 gtaggcggaggcgccgccgc 464
>dbj|AB064610.1| TT virus genes for ORF2 and ORF1, complete and partial cds, clone:CT27-02 Length = 512 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gtaggcggaggcgccgccgc 337 |||||||||||||||||||| Sbjct: 445 gtaggcggaggcgccgccgc 464
>dbj|AB064603.1| TT virus DNA, complete genome, isolate:JT41F Length = 3727 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gtaggcggaggcgccgccgc 337 |||||||||||||||||||| Sbjct: 686 gtaggcggaggcgccgccgc 705
>dbj|AB038624.1| TT virus genes for ORF2, ORF1, ORF3, complete cds, isolate:TTVyon-KC197 Length = 3676 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gtaggcggaggcgccgccgc 337 |||||||||||||||||||| Sbjct: 790 gtaggcggaggcgccgccgc 809
>dbj|AB038623.1| TT virus genes for ORF2, ORF1, ORF3, complete cds, isolate:TTVyon-KC186 Length = 3676 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gtaggcggaggcgccgccgc 337 |||||||||||||||||||| Sbjct: 790 gtaggcggaggcgccgccgc 809
>dbj|AB038622.1| TT virus genes for ORF2, ORF1, ORF3, complete cds, isolate:TTVyon-LC011 Length = 3675 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gtaggcggaggcgccgccgc 337 |||||||||||||||||||| Sbjct: 789 gtaggcggaggcgccgccgc 808
>dbj|AB038621.1| TT virus genes for ORF2, ORF1, ORF3, complete cds, isolate:TTVyon-KC009 Length = 3676 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gtaggcggaggcgccgccgc 337 |||||||||||||||||||| Sbjct: 790 gtaggcggaggcgccgccgc 809
>dbj|AB070942.1| Streptomyces avermitilis polyketide-2 biosynthetic gene cluster Length = 27522 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 cgccgccgccgggctgctgg 351 |||||||||||||||||||| Sbjct: 26886 cgccgccgccgggctgctgg 26905
>dbj|AB071805.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF5, complete cds Length = 2442 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 317 ggtaggcggaggcgccgccgccgccggg 344 ||||||||| | |||||||||||||||| Sbjct: 1504 ggtaggcggcgccgccgccgccgccggg 1477 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,645,923 Number of Sequences: 3902068 Number of extensions: 4645923 Number of successful extensions: 256093 Number of sequences better than 10.0: 217 Number of HSP's better than 10.0 without gapping: 236 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 237223 Number of HSP's gapped (non-prelim): 18864 length of query: 433 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 411 effective length of database: 17,147,199,772 effective search space: 7047499106292 effective search space used: 7047499106292 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
