>THA11_MOUSE (Q9JJD0) THAP domain-containing protein 11|
          Length = 305

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = -3

Query: 166 IWIRSVGRWGVALFCF*RLVSCDGPA-CSVN----R*VLCSSFPVVFPCRGRNEKK 14
           +W+++V R GV+  CF       G   CSV+    R       P +FP RG NE+K
Sbjct: 35  LWLKNVSRAGVS-GCFSTFQPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERK 89

>THA11_HUMAN (Q96EK4) THAP domain-containing protein 11|
          Length = 313

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = -3

Query: 166 IWIRSVGRWGVALFCF*RLVSCDGPA-CSVN----R*VLCSSFPVVFPCRGRNEKK 14
           +W+++V R GV+  CF       G   CSV+    R       P +FP RG NE+K
Sbjct: 35  LWLKNVSRAGVS-GCFSTFQPTTGHRLCSVHFQGGRKTYTVRVPTIFPLRGVNERK 89

>LEU2_NITWN (Q3SNV3) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 468

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 134 NTPSTDRSNPNPD 172
           N P+TDRS PNPD
Sbjct: 66  NVPTTDRSKPNPD 78

>ZG42_XENLA (P18720) Gastrula zinc finger protein XLCGF42.1 (Fragment)|
          Length = 168

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = +2

Query: 20  FISSSTGK--NNRKGTT*HLAVHTTSRSITRYEASKAKQCNT 139
           F  S  GK    R G T HL +HT  +  T  E  K   C T
Sbjct: 90  FSCSECGKCFTRRSGLTAHLRIHTGEKPYTCTECGKCFTCRT 131

>LEU2_RHOPA (Q6ND69) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 469

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 134 NTPSTDRSNPNPD 172
           N P+TDRS PNPD
Sbjct: 67  NVPTTDRSKPNPD 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,632,586
Number of Sequences: 219361
Number of extensions: 604274
Number of successful extensions: 1504
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)